BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014612
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    74   1e-11
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    74   2e-11
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    68   1e-09
ref|XP_002893976.1| hypothetical protein ARALYDRAFT_473796 [Arab...    67   1e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    66   4e-09

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 23/156 (14%)
 Frame = +2

Query: 5   SLPTASLVASSNNSVFSRDSFYLVATSSDLLNVTRILDD-----------FNATQRFLVQ 151
           S P  S++       F  D  YLV +  +LL VTR LD               T RF V 
Sbjct: 236 SSPRVSIIEMPQQ--FGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVC 293

Query: 152 KLDFAEAKWLEVDSLTNCALFVGVNDSFSVVASEFPGCKENSIYF--------FTG---- 295
           +LD    +W  V SL + ALF+G N S S+ + +FPGCK N IY+        + G    
Sbjct: 294 RLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 296 EDKGVFNLQDGTIQTICPSDSKFISPQPIRFSANLC 403
           +D G+FNL+DG+I+ +  S  +   P P+  + N C
Sbjct: 354 QDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNPC 389


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 23/156 (14%)
 Frame = +2

Query: 5   SLPTASLVASSNNSVFSRDSFYLVATSSDLLNVTRILDD-----------FNATQRFLVQ 151
           S P  S++       F  D  YLV +  +LL VTR LD               T RF V 
Sbjct: 236 SSPRVSIIEMPQQ--FGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVC 293

Query: 152 KLDFAEAKWLEVDSLTNCALFVGVNDSFSVVASEFPGCKENSIYF--------FTG---- 295
           +LD    +W  V SL + ALF+G N S S+ + +FPGCK N IY+        + G    
Sbjct: 294 RLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 296 EDKGVFNLQDGTIQTICPSDSKFISPQPIRFSANLC 403
           +D G+FNL+DG+I+ +  S  +   P P+  + N C
Sbjct: 354 QDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNPC 389


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 54/144 (37%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
 Frame = +2

Query: 5   SLPTASLVASSNNSVFSRDSFYLVATSSDLLNVTRILDD-----FNATQRFLVQKLDFAE 169
           S P  SL+A   +SVF  D   LV ++ +LL V                RF V KLD   
Sbjct: 225 SPPVLSLIA---DSVFGGDKKSLVESNGELLMVDTYFGQGIHRRMKRAVRFKVFKLDQIG 281

Query: 170 AKWLEVDSLTNCALFVGVNDSFSVVASEFPGCKENSIY----FFTGEDKG--------VF 313
             W+EV+SL N  LF+G   +FS VASEF GC+ N IY    FF    +G        +F
Sbjct: 282 HMWVEVESLGNRILFLGEKSTFSAVASEFCGCEGNCIYYTNTFFCPNGQGDNAYTAIDIF 341

Query: 314 NLQDGTIQTIC--PSDSKFISPQP 379
           NL++G +  +   P  SK I P P
Sbjct: 342 NLENGNMGPLLSFPDYSKVIWPPP 365


>ref|XP_002893976.1| hypothetical protein ARALYDRAFT_473796 [Arabidopsis lyrata subsp.
           lyrata] gi|297339818|gb|EFH70235.1| hypothetical protein
           ARALYDRAFT_473796 [Arabidopsis lyrata subsp. lyrata]
          Length = 347

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/78 (48%), Positives = 48/78 (61%)
 Frame = +2

Query: 101 VTRILDDFNATQRFLVQKLDFAEAKWLEVDSLTNCALFVGVNDSFSVVASEFPGCKENSI 280
           V R+L +   T  F V K+D    KW+EV SL + AL V  +  F V+ASE+ GC EN+I
Sbjct: 247 VNRVLRE--RTVGFKVYKMDKNLVKWVEVSSLGDKALIVATDSCFLVLASEYYGCLENAI 304

Query: 281 YFFTGEDKGVFNLQDGTI 334
           YF  GED  VF L DG+I
Sbjct: 305 YFNDGEDVSVFKLDDGSI 322


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 29/144 (20%)
 Frame = +2

Query: 59  DSFYLVATSSDLLNVTRILD---DFN----------ATQRFLVQKLDFAEAKWLEVDSLT 199
           D  YLV +  +LL VTR LD   +F+           T RF V +LD+   +WL + +L 
Sbjct: 255 DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG 314

Query: 200 NCALFVGVNDSFSVVASEFPGCKENSIYF------------FTGEDKGVFNLQDGTIQTI 343
           + ALF+G N S S+ A++F GC  N IY+            F   D G+F L D TI+ +
Sbjct: 315 DKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPL 374

Query: 344 CPSDSKFISP----QPIRFSANLC 403
                 F SP     P+  S N C
Sbjct: 375 PCYPRNFTSPLQWSPPLWVSPNPC 398