BLASTX nr result
ID: Coptis21_contig00014608
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014608 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated... 131 5e-29 ref|XP_002459212.1| hypothetical protein SORBIDRAFT_02g000660 [S... 119 2e-25 ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated... 115 1e-24 ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2... 114 5e-24 ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated... 107 3e-22 >ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 131 bits (330), Expect(2) = 5e-29 Identities = 72/140 (51%), Positives = 98/140 (70%), Gaps = 3/140 (2%) Frame = +3 Query: 3 YEEALKYVPSAKMLSLFVKFWMDVISLEGNNTKISGSAPSANFSV*FLSDLLKVYEKAES 182 YEEALK++PSA M +L+ KF MD I + TK S ++ +V LS LL VYEKAE+ Sbjct: 353 YEEALKFLPSAVMFNLYTKFLMDAI-VSREKTKNSEPFSTSEHTVGSLSHLLMVYEKAEN 411 Query: 183 MGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKSS 353 MGC+TEDLA Q++SLY+ +G+L+EAR +AE+ C+ K + LW+LR+S+EMK++T K Sbjct: 412 MGCLTEDLACQHVSLYLQLGKLDEARKLAEKFCNGKFSGAVYLWLLRVSVEMKYVTRKCP 471 Query: 354 SLAKDGLPSTFELFRNALEK 413 S +K L S FEL RN L K Sbjct: 472 SPSKADLLSIFELLRNILTK 491 Score = 21.2 bits (43), Expect(2) = 5e-29 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = +1 Query: 412 KVSVSEADNLW 444 KV++SEA+ LW Sbjct: 491 KVAISEAEGLW 501 >ref|XP_002459212.1| hypothetical protein SORBIDRAFT_02g000660 [Sorghum bicolor] gi|241922589|gb|EER95733.1| hypothetical protein SORBIDRAFT_02g000660 [Sorghum bicolor] Length = 682 Score = 119 bits (299), Expect = 2e-25 Identities = 71/144 (49%), Positives = 96/144 (66%), Gaps = 7/144 (4%) Frame = +3 Query: 3 YEEALKYVPSAKMLSLFVKFWMDVI--SLEGNNTKISGSAPSANFSV*FLSDLLKVYEKA 176 Y+EA++ + ++KM SL+ KFWMDV+ E + T S A+ F S +LKVYE A Sbjct: 382 YDEAVRRLSNSKMYSLYAKFWMDVLYPDREDSITLFEDSEFDASE---FTSSILKVYENA 438 Query: 177 ESMGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KI---ARLWILRISIEMKWITSK 347 ES GC+TEDLA QYISLY+ + RLEEA+T+AE+LCD + A+LW LR S+E+ I + Sbjct: 439 ESCGCLTEDLACQYISLYLKLERLEEAKTLAEKLCDGPLSNAAKLWSLRASMEINSIATA 498 Query: 348 --SSSLAKDGLPSTFELFRNALEK 413 SSSL+K+ L S F+LF L K Sbjct: 499 PGSSSLSKENLSSLFDLFSTVLSK 522 >ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Glycine max] Length = 649 Score = 115 bits (289), Expect(2) = 1e-24 Identities = 68/146 (46%), Positives = 96/146 (65%), Gaps = 3/146 (2%) Frame = +3 Query: 3 YEEALKYVPSAKMLSLFVKFWMDVISLEGNNTKISGSAPSANFSV*FLSDLLKVYEKAES 182 YEEALK VPS M SL+ F D+I+ + T I+GS+ A V ++S LL +YE+AES Sbjct: 352 YEEALKNVPSGTMFSLYANFLTDIIAPKEGETDINGSSGCA---VNYISHLLSIYERAES 408 Query: 183 MGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKSS 353 MGC+TEDLA +++SL++ + +L+EA+ +A +LC K+A LW LRI+IE++ IT SS Sbjct: 409 MGCITEDLACKHVSLHLQLRQLDEAQKLAAKLCSGKLAESVELWGLRITIEIRCITGSSS 468 Query: 354 SLAKDGLPSTFELFRNALEKSVSFRS 431 S + L S FEL + L K RS Sbjct: 469 SPSDADLQSLFELLQQILMKVSVSRS 494 Score = 21.9 bits (45), Expect(2) = 1e-24 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 Query: 412 KVSVSEADNLW 444 KVSVS ++NLW Sbjct: 488 KVSVSRSENLW 498 >ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1| predicted protein [Populus trichocarpa] Length = 643 Score = 114 bits (285), Expect(2) = 5e-24 Identities = 64/141 (45%), Positives = 94/141 (66%), Gaps = 4/141 (2%) Frame = +3 Query: 3 YEEALKYVPSAKMLSLFVKFWMDVISLEGN-NTKISGSAPSANFSV*FLSDLLKVYEKAE 179 YEEAL+++PS M +L++KF MD I+ +G N S+P+ ++ +S LL VYEKA+ Sbjct: 345 YEEALQFLPSPMMFNLYIKFLMDAIAPKGGENDPSKVSSPTEDY----ISHLLVVYEKAD 400 Query: 180 SMGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKS 350 +G MTEDLA QY+S Y+ +GR +EAR +A+RLC K++ +LWILR S+E+K T + Sbjct: 401 VVGYMTEDLACQYVSFYLQLGRFDEARKLADRLCSGKLSDSEKLWILRASMEIKSFTDDT 460 Query: 351 SSLAKDGLPSTFELFRNALEK 413 S+ +KD L R+AL K Sbjct: 461 SAPSKDDFQYVLGLLRSALTK 481 Score = 21.6 bits (44), Expect(2) = 5e-24 Identities = 7/11 (63%), Positives = 11/11 (100%) Frame = +1 Query: 412 KVSVSEADNLW 444 KVS+S+A++LW Sbjct: 481 KVSISQAEDLW 491 >ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Glycine max] Length = 655 Score = 107 bits (268), Expect(2) = 3e-22 Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 3/140 (2%) Frame = +3 Query: 3 YEEALKYVPSAKMLSLFVKFWMDVISLEGNNTKISGSAPSANFSV*FLSDLLKVYEKAES 182 YEEAL+ VPS M L+ F D+++ + T I+GS+ A ++S LL +YE+AES Sbjct: 359 YEEALENVPSGTMFCLYANFLTDIVAHKEGETNINGSSGHA---ANYISHLLLIYERAES 415 Query: 183 MGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKSS 353 MGC+TEDLA +++SL++ + +L+EAR +A +LC K+A LW LRI+IE++ T+KSS Sbjct: 416 MGCITEDLACKHVSLHLQLRQLDEARKLAAKLCSGKLAESVELWGLRITIEIR-CTTKSS 474 Query: 354 SLAKDGLPSTFELFRNALEK 413 S + L S FEL + L K Sbjct: 475 SPSDADLQSLFELLQQILMK 494 Score = 22.3 bits (46), Expect(2) = 3e-22 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = +1 Query: 412 KVSVSEADNLW 444 KVSVS+++NLW Sbjct: 494 KVSVSKSENLW 504