BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014608
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   131   5e-29
ref|XP_002459212.1| hypothetical protein SORBIDRAFT_02g000660 [S...   119   2e-25
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...   115   1e-24
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...   114   5e-24
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   107   3e-22

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  131 bits (330), Expect(2) = 5e-29
 Identities = 72/140 (51%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
 Frame = +3

Query: 3   YEEALKYVPSAKMLSLFVKFWMDVISLEGNNTKISGSAPSANFSV*FLSDLLKVYEKAES 182
           YEEALK++PSA M +L+ KF MD I +    TK S    ++  +V  LS LL VYEKAE+
Sbjct: 353 YEEALKFLPSAVMFNLYTKFLMDAI-VSREKTKNSEPFSTSEHTVGSLSHLLMVYEKAEN 411

Query: 183 MGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKSS 353
           MGC+TEDLA Q++SLY+ +G+L+EAR +AE+ C+ K +    LW+LR+S+EMK++T K  
Sbjct: 412 MGCLTEDLACQHVSLYLQLGKLDEARKLAEKFCNGKFSGAVYLWLLRVSVEMKYVTRKCP 471

Query: 354 SLAKDGLPSTFELFRNALEK 413
           S +K  L S FEL RN L K
Sbjct: 472 SPSKADLLSIFELLRNILTK 491



 Score = 21.2 bits (43), Expect(2) = 5e-29
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 412 KVSVSEADNLW 444
           KV++SEA+ LW
Sbjct: 491 KVAISEAEGLW 501


>ref|XP_002459212.1| hypothetical protein SORBIDRAFT_02g000660 [Sorghum bicolor]
           gi|241922589|gb|EER95733.1| hypothetical protein
           SORBIDRAFT_02g000660 [Sorghum bicolor]
          Length = 682

 Score =  119 bits (299), Expect = 2e-25
 Identities = 71/144 (49%), Positives = 96/144 (66%), Gaps = 7/144 (4%)
 Frame = +3

Query: 3   YEEALKYVPSAKMLSLFVKFWMDVI--SLEGNNTKISGSAPSANFSV*FLSDLLKVYEKA 176
           Y+EA++ + ++KM SL+ KFWMDV+    E + T    S   A+    F S +LKVYE A
Sbjct: 382 YDEAVRRLSNSKMYSLYAKFWMDVLYPDREDSITLFEDSEFDASE---FTSSILKVYENA 438

Query: 177 ESMGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KI---ARLWILRISIEMKWITSK 347
           ES GC+TEDLA QYISLY+ + RLEEA+T+AE+LCD  +   A+LW LR S+E+  I + 
Sbjct: 439 ESCGCLTEDLACQYISLYLKLERLEEAKTLAEKLCDGPLSNAAKLWSLRASMEINSIATA 498

Query: 348 --SSSLAKDGLPSTFELFRNALEK 413
             SSSL+K+ L S F+LF   L K
Sbjct: 499 PGSSSLSKENLSSLFDLFSTVLSK 522


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score =  115 bits (289), Expect(2) = 1e-24
 Identities = 68/146 (46%), Positives = 96/146 (65%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   YEEALKYVPSAKMLSLFVKFWMDVISLEGNNTKISGSAPSANFSV*FLSDLLKVYEKAES 182
           YEEALK VPS  M SL+  F  D+I+ +   T I+GS+  A   V ++S LL +YE+AES
Sbjct: 352 YEEALKNVPSGTMFSLYANFLTDIIAPKEGETDINGSSGCA---VNYISHLLSIYERAES 408

Query: 183 MGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKSS 353
           MGC+TEDLA +++SL++ + +L+EA+ +A +LC  K+A    LW LRI+IE++ IT  SS
Sbjct: 409 MGCITEDLACKHVSLHLQLRQLDEAQKLAAKLCSGKLAESVELWGLRITIEIRCITGSSS 468

Query: 354 SLAKDGLPSTFELFRNALEKSVSFRS 431
           S +   L S FEL +  L K    RS
Sbjct: 469 SPSDADLQSLFELLQQILMKVSVSRS 494



 Score = 21.9 bits (45), Expect(2) = 1e-24
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 412 KVSVSEADNLW 444
           KVSVS ++NLW
Sbjct: 488 KVSVSRSENLW 498


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  114 bits (285), Expect(2) = 5e-24
 Identities = 64/141 (45%), Positives = 94/141 (66%), Gaps = 4/141 (2%)
 Frame = +3

Query: 3   YEEALKYVPSAKMLSLFVKFWMDVISLEGN-NTKISGSAPSANFSV*FLSDLLKVYEKAE 179
           YEEAL+++PS  M +L++KF MD I+ +G  N     S+P+ ++    +S LL VYEKA+
Sbjct: 345 YEEALQFLPSPMMFNLYIKFLMDAIAPKGGENDPSKVSSPTEDY----ISHLLVVYEKAD 400

Query: 180 SMGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKS 350
            +G MTEDLA QY+S Y+ +GR +EAR +A+RLC  K++   +LWILR S+E+K  T  +
Sbjct: 401 VVGYMTEDLACQYVSFYLQLGRFDEARKLADRLCSGKLSDSEKLWILRASMEIKSFTDDT 460

Query: 351 SSLAKDGLPSTFELFRNALEK 413
           S+ +KD       L R+AL K
Sbjct: 461 SAPSKDDFQYVLGLLRSALTK 481



 Score = 21.6 bits (44), Expect(2) = 5e-24
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +1

Query: 412 KVSVSEADNLW 444
           KVS+S+A++LW
Sbjct: 481 KVSISQAEDLW 491


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score =  107 bits (268), Expect(2) = 3e-22
 Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
 Frame = +3

Query: 3   YEEALKYVPSAKMLSLFVKFWMDVISLEGNNTKISGSAPSANFSV*FLSDLLKVYEKAES 182
           YEEAL+ VPS  M  L+  F  D+++ +   T I+GS+  A     ++S LL +YE+AES
Sbjct: 359 YEEALENVPSGTMFCLYANFLTDIVAHKEGETNINGSSGHA---ANYISHLLLIYERAES 415

Query: 183 MGCMTEDLAYQYISLYVLVGRLEEARTMAERLCD*KIA---RLWILRISIEMKWITSKSS 353
           MGC+TEDLA +++SL++ + +L+EAR +A +LC  K+A    LW LRI+IE++  T+KSS
Sbjct: 416 MGCITEDLACKHVSLHLQLRQLDEARKLAAKLCSGKLAESVELWGLRITIEIR-CTTKSS 474

Query: 354 SLAKDGLPSTFELFRNALEK 413
           S +   L S FEL +  L K
Sbjct: 475 SPSDADLQSLFELLQQILMK 494



 Score = 22.3 bits (46), Expect(2) = 3e-22
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +1

Query: 412 KVSVSEADNLW 444
           KVSVS+++NLW
Sbjct: 494 KVSVSKSENLW 504