BLASTX nr result

ID: Coptis21_contig00014605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014605
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336465.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...    85   5e-15
gb|AFK37449.1| unknown [Lotus japonicus]                               84   9e-15
ref|XP_003621540.1| RING finger protein [Medicago truncatula] gi...    84   9e-15
ref|XP_002331274.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002336465.1| predicted protein [Populus trichocarpa] gi|222835076|gb|EEE73525.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = -2

Query: 359 CLDGYDEENPRIVPECKHHYHLGCILEWMERSNTCPVCNKVMIYEETS 216
           CL+ Y  ENPRIV +C HHYHL CI EWMERS TCPVC+KVMI++ETS
Sbjct: 154 CLEEYSVENPRIVTQCNHHYHLSCIYEWMERSQTCPVCSKVMIFDETS 201


>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 32/48 (66%), Positives = 42/48 (87%)
 Frame = -2

Query: 359 CLDGYDEENPRIVPECKHHYHLGCILEWMERSNTCPVCNKVMIYEETS 216
           CL+ Y EENP+IV +C HH+HLGCI EWMERS++CPVC KVM+++ET+
Sbjct: 179 CLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 226


>gb|AFK37449.1| unknown [Lotus japonicus]
          Length = 229

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 33/48 (68%), Positives = 41/48 (85%)
 Frame = -2

Query: 359 CLDGYDEENPRIVPECKHHYHLGCILEWMERSNTCPVCNKVMIYEETS 216
           CL+ Y EENPRI+ +C HHYHLGCI EWMERS++CPVC KVM ++ET+
Sbjct: 182 CLEEYTEENPRIMTKCSHHYHLGCIYEWMERSDSCPVCGKVMDFDETT 229


>ref|XP_003621540.1| RING finger protein [Medicago truncatula]
           gi|217073256|gb|ACJ84987.1| unknown [Medicago
           truncatula] gi|355496555|gb|AES77758.1| RING finger
           protein [Medicago truncatula]
          Length = 227

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 32/47 (68%), Positives = 41/47 (87%)
 Frame = -2

Query: 359 CLDGYDEENPRIVPECKHHYHLGCILEWMERSNTCPVCNKVMIYEET 219
           CL+ Y EENP+IV +C HHYHLGCI EWMERS++CPVC KVM+++E+
Sbjct: 180 CLEEYTEENPKIVTKCNHHYHLGCIYEWMERSDSCPVCGKVMLFDES 226


>ref|XP_002331274.1| predicted protein [Populus trichocarpa] gi|222873699|gb|EEF10830.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 31/48 (64%), Positives = 42/48 (87%)
 Frame = -2

Query: 359 CLDGYDEENPRIVPECKHHYHLGCILEWMERSNTCPVCNKVMIYEETS 216
           CLD Y +ENP+I+ +C HH+HLGCI EWMERS++CPVC KVM+++ET+
Sbjct: 180 CLDEYTQENPKIMTKCTHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 227


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