BLASTX nr result

ID: Coptis21_contig00014595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014595
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300558.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002312011.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002300558.1| predicted protein [Populus trichocarpa] gi|222847816|gb|EEE85363.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2   SIDNNPPIPTPTLNYKPYGTAIAASLMHDIVLLT---TPYKKN*KYYVCKPTTREVYQLN 172
           S DN    PT +L++ P    I AS    ++L T     Y+   K YVCKPTT++  Q+ 
Sbjct: 46  SPDNTTSRPTLSLDFLPCSVKIEASTNQGLLLCTHFPPTYRNIPKVYVCKPTTKQWKQIP 105

Query: 173 TPKVR*FFTESLRMLVNSMKPLGFTIVRLSNP 268
            PK R +  +++ M+V S +PL + IVR S P
Sbjct: 106 NPKTR-YRNKAIGMIVLSSRPLHYKIVRFSQP 136


>ref|XP_002312011.1| predicted protein [Populus trichocarpa] gi|222851831|gb|EEE89378.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/89 (37%), Positives = 48/89 (53%)
 Frame = +2

Query: 2   SIDNNPPIPTPTLNYKPYGTAIAASLMHDIVLLTTPYKKN*KYYVCKPTTREVYQLNTPK 181
           S+D   P P  +LN+ P    I AS    ++L  T ++   +YYVCKPTT++   +  PK
Sbjct: 73  SVDTLKPYPKLSLNFLPASIEIVASTNQGLLLCQTHHRP--QYYVCKPTTKQWQIIPNPK 130

Query: 182 VR*FFTESLRMLVNSMKPLGFTIVRLSNP 268
           +R + T    M+V    PL + IVR S P
Sbjct: 131 MR-YQTLETSMIVIGSNPLHYKIVRFSEP 158


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