BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014583
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   171   9e-57
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp....   125   5e-27
ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [...   114   5e-25
ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [...   114   5e-25
ref|ZP_08244251.1| Hypothetical protein APO_2582 [Acetobacter po...   108   3e-24

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score =  171 bits (433), Expect(2) = 9e-57
 Identities = 77/77 (100%), Positives = 77/77 (100%)
 Frame = +2

Query: 338 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 517
           GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ
Sbjct: 417 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 476

Query: 518 HAAVNMYPGPVHTARHT 568
           HAAVNMYPGPVHTARHT
Sbjct: 477 HAAVNMYPGPVHTARHT 493



 Score = 74.7 bits (182), Expect(2) = 9e-57
 Identities = 39/61 (63%), Positives = 43/61 (70%)
 Frame = +1

Query: 85  DDDVELAAEEDSAFRRATRWCGT*W**YAPPKRLRNKKTKRCVPHSRGTASDILEEGGDD 264
           DDDVELAAE+DS               YAPPK+   K+TKRC+PHSRGTASDILEEGGDD
Sbjct: 376 DDDVELAAEKDS---------------YAPPKQTAPKQTKRCMPHSRGTASDILEEGGDD 420

Query: 265 V 267
           V
Sbjct: 421 V 421


>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
           gi|40795104|gb|AAR91148.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 111

 Score =  125 bits (314), Expect = 5e-27
 Identities = 69/121 (57%), Positives = 71/121 (58%)
 Frame = +2

Query: 128 GEPPGGVVRSGNSTPRQNGSETKKQKGACRTHEGLPVIYWRKVGMTSXXXXXXXXXXXXX 307
           G+PPGGVVRSGNST         KQ+  C  H           G  S             
Sbjct: 23  GQPPGGVVRSGNST-----RPAPKQRKRCVPHSR---------GTASEILEE-------- 60

Query: 308 XXXXXXXXXXGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNM 487
                     GGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQLGNM
Sbjct: 61  ----------GGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNM 110

Query: 488 K 490
           K
Sbjct: 111 K 111


>ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [Rhodospirillum
           photometricum DSM 122] gi|378401450|emb|CCG06566.1|
           Putative uncharacterized protein, partial
           [Rhodospirillum photometricum DSM 122]
          Length = 161

 Score =  114 bits (284), Expect(2) = 5e-25
 Identities = 55/77 (71%), Positives = 59/77 (76%)
 Frame = +2

Query: 338 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 517
           GGDDVKS+WPL AG HTCYNG YNG    +   I K CLSSDC+LQLG MK ESLVI DQ
Sbjct: 54  GGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLGCMKSESLVIVDQ 113

Query: 518 HAAVNMYPGPVHTARHT 568
           HA VN +PG VHTARHT
Sbjct: 114 HATVNTFPGLVHTARHT 130



 Score = 25.8 bits (55), Expect(2) = 5e-25
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 217 HSRGTASDILEEGGDDV 267
           HS  TA D  EEGGDDV
Sbjct: 42  HSGETAGDKPEEGGDDV 58


>ref|YP_005415556.1| hypothetical protein RSPPHO_03247, partial [Rhodospirillum
           photometricum DSM 122] gi|378401470|emb|CCG06586.1|
           unnamed protein product, partial [Rhodospirillum
           photometricum DSM 122]
          Length = 137

 Score =  114 bits (284), Expect(2) = 5e-25
 Identities = 55/77 (71%), Positives = 59/77 (76%)
 Frame = +2

Query: 338 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 517
           GGDDVKS+WPL AG HTCYNG YNG    +   I K CLSSDC+LQLG MK ESLVI DQ
Sbjct: 30  GGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLGCMKSESLVIVDQ 89

Query: 518 HAAVNMYPGPVHTARHT 568
           HA VN +PG VHTARHT
Sbjct: 90  HATVNTFPGLVHTARHT 106



 Score = 25.8 bits (55), Expect(2) = 5e-25
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 217 HSRGTASDILEEGGDDV 267
           HS  TA D  EEGGDDV
Sbjct: 18  HSGETAGDKPEEGGDDV 34


>ref|ZP_08244251.1| Hypothetical protein APO_2582 [Acetobacter pomorum DM001]
           gi|326695170|gb|EGE46866.1| Hypothetical protein
           APO_2582 [Acetobacter pomorum DM001]
          Length = 105

 Score =  108 bits (271), Expect(2) = 3e-24
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = +2

Query: 338 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 517
           GGDDVKS+WPL  G HTCYNG  +GK G     I K  LSSDC+LQL  MK+ESLVIADQ
Sbjct: 20  GGDDVKSSWPLCPGLHTCYNGGDSGKLGGDTMLISKSRLSSDCTLQLECMKVESLVIADQ 79

Query: 518 HAAVNMYPGPVHTARHT 568
           HAAVN +PG VHTARHT
Sbjct: 80  HAAVNTFPGLVHTARHT 96



 Score = 28.5 bits (62), Expect(2) = 3e-24
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +1

Query: 217 HSRGTASDILEEGGDDV 267
           HSR TA D  EEGGDDV
Sbjct: 8   HSRETAGDKPEEGGDDV 24