BLASTX nr result

ID: Coptis21_contig00014577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014577
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323859.1| condensin complex components subunit [Populu...   276   3e-72
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   275   5e-72
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   275   7e-72
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              275   7e-72
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   275   9e-72

>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
            gi|222866861|gb|EEF03992.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1256

 Score =  276 bits (706), Expect = 3e-72
 Identities = 136/139 (97%), Positives = 138/139 (99%)
 Frame = -1

Query: 678  QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 499
            QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY
Sbjct: 1118 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 1177

Query: 498  KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 319
            KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN
Sbjct: 1178 KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 1237

Query: 318  CTKSITINPGSFAICENAA 262
            CTKSITINPGSF +C+NAA
Sbjct: 1238 CTKSITINPGSFVVCQNAA 1256


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1242

 Score =  275 bits (704), Expect = 5e-72
 Identities = 137/139 (98%), Positives = 137/139 (98%)
 Frame = -1

Query: 678  QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 499
            QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY
Sbjct: 1104 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 1163

Query: 498  KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 319
            KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN
Sbjct: 1164 KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 1223

Query: 318  CTKSITINPGSFAICENAA 262
            CTKSITINPGSF ICE AA
Sbjct: 1224 CTKSITINPGSFVICEKAA 1242


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Vitis vinifera]
          Length = 1486

 Score =  275 bits (703), Expect = 7e-72
 Identities = 136/139 (97%), Positives = 137/139 (98%)
 Frame = -1

Query: 678  QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 499
            QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY
Sbjct: 1348 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 1407

Query: 498  KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 319
            KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN
Sbjct: 1408 KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 1467

Query: 318  CTKSITINPGSFAICENAA 262
            CTKSITINPGSF +CE AA
Sbjct: 1468 CTKSITINPGSFVVCEKAA 1486


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  275 bits (703), Expect = 7e-72
 Identities = 136/139 (97%), Positives = 137/139 (98%)
 Frame = -1

Query: 678  QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 499
            QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY
Sbjct: 1115 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 1174

Query: 498  KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 319
            KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN
Sbjct: 1175 KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 1234

Query: 318  CTKSITINPGSFAICENAA 262
            CTKSITINPGSF +CE AA
Sbjct: 1235 CTKSITINPGSFVVCEKAA 1253


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223525329|gb|EEF27966.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  275 bits (702), Expect = 9e-72
 Identities = 136/139 (97%), Positives = 137/139 (98%)
 Frame = -1

Query: 678  QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 499
            QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY
Sbjct: 1121 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHY 1180

Query: 498  KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 319
            KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN
Sbjct: 1181 KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDN 1240

Query: 318  CTKSITINPGSFAICENAA 262
            CTKSITINPGSF +C NAA
Sbjct: 1241 CTKSITINPGSFVVCGNAA 1259


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