BLASTX nr result

ID: Coptis21_contig00014575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014575
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331903.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002327600.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002531424.1| receptor-kinase, putative [Ricinus communis]...    70   1e-10

>ref|XP_002331903.1| predicted protein [Populus trichocarpa] gi|222874575|gb|EEF11706.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +1

Query: 1   GRLSSLTYFNVGVNRLSGEVPLTIFNISSLNGLVIAFNQFSGSLPPDMGITLPNLNSFFG 180
           G+L +L++F++G N LSG +PL+++NISSL  L +A NQF G+LPP+MG+TLPNL     
Sbjct: 211 GKLKTLSFFSLGSNNLSGTIPLSLYNISSLLHLSLAHNQFHGTLPPNMGLTLPNLQYLGI 270

Query: 181 ARNQLSG 201
             N+LSG
Sbjct: 271 HDNRLSG 277


>ref|XP_002327600.1| predicted protein [Populus trichocarpa] gi|222836154|gb|EEE74575.1|
           predicted protein [Populus trichocarpa]
          Length = 985

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +1

Query: 1   GRLSSLTYFNVGVNRLSGEVPLTIFNISSLNGLVIAFNQFSGSLPPDMGITLPNLNSFFG 180
           G+L +L++F++G N LSG +PL+++NISSL  L +A NQF G+LPP+MG+TLPNL     
Sbjct: 188 GKLKTLSFFSLGSNNLSGTIPLSLYNISSLLHLSLAHNQFHGTLPPNMGLTLPNLQYLGI 247

Query: 181 ARNQLSG 201
             N+LSG
Sbjct: 248 HDNRLSG 254


>ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/68 (48%), Positives = 49/68 (72%)
 Frame = +1

Query: 1   GRLSSLTYFNVGVNRLSGEVPLTIFNISSLNGLVIAFNQFSGSLPPDMGITLPNLNSFFG 180
           G+L +L +F++G N LSG +P +++NISSL    + +NQF G+LPP++G+TLPNL     
Sbjct: 210 GKLKTLNFFSLGSNNLSGTIPASLYNISSLIHFSLPYNQFHGTLPPNIGLTLPNLQYLGI 269

Query: 181 ARNQLSGQ 204
             N+LSGQ
Sbjct: 270 HDNRLSGQ 277


>ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1|
           predicted protein [Populus trichocarpa]
          Length = 1021

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/67 (53%), Positives = 46/67 (68%)
 Frame = +1

Query: 1   GRLSSLTYFNVGVNRLSGEVPLTIFNISSLNGLVIAFNQFSGSLPPDMGITLPNLNSFFG 180
           G+L +L   N+  NRLSG +P +IFN+SSL  L I FN F G+LP D+GI+LPNL  F  
Sbjct: 213 GKLKNLRILNLMDNRLSGVIPPSIFNLSSLTALDIGFNLFHGNLPSDIGISLPNLEFFSI 272

Query: 181 ARNQLSG 201
           A NQ +G
Sbjct: 273 ASNQFTG 279


>ref|XP_002531424.1| receptor-kinase, putative [Ricinus communis]
           gi|223528974|gb|EEF30966.1| receptor-kinase, putative
           [Ricinus communis]
          Length = 1015

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +1

Query: 1   GRLSSLTYFNVGVNRLSGEVPLTIFNISSLNGLVIAFNQFSGSLPPDMGITLPNLNSFFG 180
           G+L++L + ++ VN LSG +P +I+N+SS+N L I +NQ  G LP ++GITLPNL  F  
Sbjct: 216 GQLNNLIFISLSVNNLSGTIPPSIYNLSSINTLNIVYNQIQGRLPSNLGITLPNLQVFAI 275

Query: 181 ARNQLSG 201
           ARN   G
Sbjct: 276 ARNDFIG 282


Top