BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014574
         (2700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   997   0.0  
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   948   0.0  
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   936   0.0  
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   936   0.0  
ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...   837   0.0  

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  997 bits (2578), Expect = 0.0
 Identities = 532/872 (61%), Positives = 627/872 (71%), Gaps = 14/872 (1%)
 Frame = -1

Query: 2667 EDPVNLYLNLDQWSH---GQXXXXXXXXXXXXXXXEFFLVGFVVVRIVGLQHYSGRITGR 2497
            EDPV+L+++LD W                      E +LVGFV+V IVG+Q+YSG I+GR
Sbjct: 4    EDPVSLFMSLDHWREFPIDADDDEDSSQCPLSSPSETYLVGFVIVNIVGIQYYSGTISGR 63

Query: 2496 EMIGLVREPLNPYDSNAIKVLNMRSAQVGYVERDCAAVFAPLMDAGLITLEGIVPSTPGV 2317
            E +GLVREPLNPYD NAIKVLN  + QVG+++R  AAV APLMDA L+T+EGIVP+TPG 
Sbjct: 64   ERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAAAVLAPLMDANLVTVEGIVPNTPGS 123

Query: 2316 KQRYRLPCQVHIFSRIDAFSIVENAIEGGGLLLIPPEEPMFQLXXXXXXXXXXXXXXXXX 2137
              RYR+PCQVHIF++I+ F  V +AI  GGL LI   +P F L                 
Sbjct: 124  GNRYRIPCQVHIFAQIEWFPRVRSAISRGGLQLISDSDPSFTLSEAVIVKEKKCDKEFKS 183

Query: 2136 XXXXFMLVSANEDKKEGMKAMEPPSDVIKPKLFLHQKEGLGWLVHRESCEELPPFWEEKD 1957
                F L   N +K+  ++AMEPP DVIK +LFLHQKE LGWLVHRE+  ELPPFWE+++
Sbjct: 184  LDEIFKLAIENVNKQGALEAMEPPKDVIKSELFLHQKEALGWLVHRENSCELPPFWEKQN 243

Query: 1956 GGYMNVLTNFHTDKRPVPLRGGIFADDMGLGKTLTLLSLIATNRAEDDVALG---DNXXX 1786
            G Y+NVLTN+ T+KRP PLRGGIFADDMGLGKTLTLL LIA ++   D++     DN   
Sbjct: 244  GSYVNVLTNYQTNKRPEPLRGGIFADDMGLGKTLTLLCLIAFDKCSSDLSYSVNRDNIEK 303

Query: 1785 XXXXXXXXXXXXXXXXXXVAVNS-----RKKRKMSEPHIEDK-EEEGVRTKGTLVVCPPS 1624
                                V+      RKKRK  +   +D  +   V +K TL+VCPPS
Sbjct: 304  LGEEDEELIVSSGKKSRKGRVSRKASGLRKKRKTDDTPSDDMLKGNSVVSKTTLIVCPPS 363

Query: 1623 VMSTWITQLTEHTRRGSFKVYLYYGGERTQIVRELQKYDLVLTTYSTLAAEQNRE-SPIK 1447
            V STW+TQL EHT     KVY+YYG  RTQ   ELQKYD+VLTTYSTLA E+    SP+K
Sbjct: 364  VFSTWVTQLLEHTTPKRLKVYMYYGN-RTQEAEELQKYDIVLTTYSTLATEEAWSGSPVK 422

Query: 1446 KMEWFRVILDEAHVIKNEGALQSQAVIGLKAKRRWVVTGTPIQNGSLDLFSLMAFLKFEP 1267
            K+EW+RVILDEAH+IKN  A QSQAV  L+AKRRWVVTGTPIQNG+ DLFSLMAFL+FEP
Sbjct: 423  KIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFLRFEP 482

Query: 1266 FSIKSYWLSLVQRPLSQGNESGLSRLQILMGTISLRRVKDNIDIGLPPKTIETCFVDLSA 1087
            FSIKSYW SLVQRPL QG E GLSRLQ+LM TISLRR KD   IGLPPK++ETCFV+LSA
Sbjct: 483  FSIKSYWQSLVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIGLPPKSVETCFVELSA 542

Query: 1086 RERELYDQMENEARTLVKAYICVNSVVRNYSTVLSIILRLRQICDDIALYP-DMKLLLPS 910
             ERELYDQME E + +++ YI   SV+RNYSTVL IILRLRQIC D+AL P D++ LL S
Sbjct: 543  EERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLRQICTDVALCPSDLRSLLLS 602

Query: 909  NNIEDVSNKPELLKKMVAMLQDGDDFDCPICISPPSNTIITRCAHIFCRACILKALKRPN 730
            NNIEDVSN PELLKKMV +LQDG+DFDCPICISPP+N +IT CAHIFCR CILK LKR  
Sbjct: 603  NNIEDVSNNPELLKKMVLVLQDGEDFDCPICISPPTNIVITCCAHIFCRVCILKTLKRTK 662

Query: 729  PSCPLCRQSLSESDLYLAXXXXXXXXXXXXXXXXXXXSKVNAXXXXXLEDRERDPSTKSI 550
            P CPLCR  LS+SDL+ A                   SKV          R+++PSTKS+
Sbjct: 663  PCCPLCRHPLSQSDLFSAPPESTETDNSEIPSSECTSSKVLTLLKFLSASRDQNPSTKSV 722

Query: 549  VFSQFRKMLILLEEPLKASGFTILRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKAS 370
            VFSQFRKML+LLE+PLKA+GF  LRLDGSM AK+RA+VIE+F        TVLLASLKAS
Sbjct: 723  VFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKAS 782

Query: 369  GTGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQD 190
            G GINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQK+DVKIVRLI ++SIEERIL LQ+
Sbjct: 783  GAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQE 842

Query: 189  KKKMLAREAFRRKDGKDAGRIGMEDLRVLMAL 94
            +KK LA+EAF R+  KD   +G+EDLR+LM+L
Sbjct: 843  RKKKLAKEAFGRRGLKDRREVGVEDLRMLMSL 874


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316976|gb|EFH47398.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  948 bits (2451), Expect = 0.0
 Identities = 489/828 (59%), Positives = 603/828 (72%), Gaps = 4/828 (0%)
 Frame = -1

Query: 2565 FLVGFVVVRIVGLQHYSGRITGREMIGLVREPLNPYDSNAIKVLNMRSAQVGYVERDCAA 2386
            +L+GFV+  IVGL++YSGRI GREM+GLVREPLNPYD+NAI+VLN RS QVG++ER  AA
Sbjct: 37   YLIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTVAA 96

Query: 2385 VFAPLMDAGLITLEGIVPSTPGVKQRYRLPCQVHIFSRIDAFSIVENAIEGGGLLLIPPE 2206
            V APL+D+  I +EGIVP+T     R+++PCQ+H+F++++A S V++ I  GGL+LI   
Sbjct: 97   VLAPLIDSHTIIVEGIVPNTRSNSNRFKIPCQIHVFAKLEASSTVKSTISRGGLVLISDS 156

Query: 2205 EPMFQLXXXXXXXXXXXXXXXXXXXXXFMLVSANEDKKEGMKAMEPPSDVIKPKLFLHQK 2026
            +  F L                     F LV  N   K  + A+EPP +VIK +LF HQK
Sbjct: 157  DTAFGLSEAVVVKEQMGNGDKKSVDKIFKLVDRNVKLKGKLVAVEPPREVIKSELFAHQK 216

Query: 2025 EGLGWLVHRESCEELPPFWEEKDGGYMNVLTNFHTDKRPVPLRGGIFADDMGLGKTLTLL 1846
            EGLGWL++RE   ELPPFWEEKDG ++N LTN+ +DKRP PLRGG+FADDMGLGKTLTLL
Sbjct: 217  EGLGWLLYREKSGELPPFWEEKDGEFLNTLTNYRSDKRPEPLRGGVFADDMGLGKTLTLL 276

Query: 1845 SLIATNRAEDDVALGDNXXXXXXXXXXXXXXXXXXXXXVAVNSRKKRKMSEPHIEDKEEE 1666
            SLIA +R  +                             +  SR ++K+     +D    
Sbjct: 277  SLIAFDRYGNASTSTPTKEPLDVEGDKIEKKGKKRGRGKSSESRTRKKLKP---DDVVGM 333

Query: 1665 GVRTKGTLVVCPPSVMSTWITQLTEHTRRGSFKVYLYYGGERTQIVRELQKYDLVLTTYS 1486
             V  K TL+VCPPSV+S WITQL EHT +GS KVY+Y+GGERT  V EL KYDLVLTTYS
Sbjct: 334  NVSQKTTLIVCPPSVISAWITQLEEHTVQGSLKVYMYHGGERTDDVNELMKYDLVLTTYS 393

Query: 1485 TLAAEQNRE-SPIKKMEWFRVILDEAHVIKNEGALQSQAVIGLKAKRRWVVTGTPIQNGS 1309
            TLA E++ E SP+KKMEW R+ILDEAH IKN  A QS+ V  LKA RRW VTGTPIQNGS
Sbjct: 394  TLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVSKLKASRRWAVTGTPIQNGS 453

Query: 1308 LDLFSLMAFLKFEPFSIKSYWLSLVQRPLSQGNESGLSRLQILMGTISLRRVKDNIDIGL 1129
             DL+SLMAFL+FEPFSIKSYW SL+QRPL QGN+ GLSRLQ+LM TISLRR K+   IGL
Sbjct: 454  FDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGL 513

Query: 1128 PPKTIETCFVDLSARERELYDQMENEARTLVKAYICVNSVVRNYSTVLSIILRLRQICDD 949
            PPKT+ETC+V+LS  ER+LYD ME EA+ +V+  I   S++RNYSTVLSIILRLRQ+CDD
Sbjct: 514  PPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDD 573

Query: 948  IALY-PDMKLLLPSNNIEDVSNKPELLKKMVAMLQDGDDFDCPICISPPSNTIITRCAHI 772
            I+L  P+++    S ++EDV +KPELL+K++A+LQDG+DFDCPICISPP+N IITRCAHI
Sbjct: 574  ISLCPPELRSFTTSTSVEDVIDKPELLQKLIAVLQDGEDFDCPICISPPTNIIITRCAHI 633

Query: 771  FCRACILKALKRPNPSCPLCRQSLSESDLYLA--XXXXXXXXXXXXXXXXXXXSKVNAXX 598
            FCRACIL+ L+R  P CPLCR SL++SDLY A                     SKV+A  
Sbjct: 634  FCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDDSNTDGEDTKSSTKSSKVSALL 693

Query: 597  XXXLEDRERDPSTKSIVFSQFRKMLILLEEPLKASGFTILRLDGSMTAKKRAEVIEQFSN 418
               +  R+  P+TKS+VFSQFRKML+LLE PLKA+GFTILRLDG+MT KKR +VI +F N
Sbjct: 694  SLLIASRQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEFGN 753

Query: 417  QDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKKDVKIVR 238
             +     VLLASLKASG GINLTAASRVYLL+PWWNPAVEEQAMDR+HRIGQK++VK++R
Sbjct: 754  PELTGPVVLLASLKASGAGINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQKQEVKMIR 813

Query: 237  LITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIGMEDLRVLMAL 94
            +I +DSIEER+L LQ KKK LA EAF+R+  KD   + +ED+  LM+L
Sbjct: 814  MIARDSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVIALMSL 861


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  936 bits (2420), Expect = 0.0
 Identities = 484/828 (58%), Positives = 597/828 (72%), Gaps = 4/828 (0%)
 Frame = -1

Query: 2565 FLVGFVVVRIVGLQHYSGRITGREMIGLVREPLNPYDSNAIKVLNMRSAQVGYVERDCAA 2386
            +L+GFV+  IVGL++YSGRI GREM+GLVREPLN YD+NAI+VLN RS QVG++ER  AA
Sbjct: 38   YLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIRVLNTRSEQVGHIERTVAA 97

Query: 2385 VFAPLMDAGLITLEGIVPSTPGVKQRYRLPCQVHIFSRIDAFSIVENAIEGGGLLLIPPE 2206
            V AP++D+  I +EGIVP+T     RYR+PCQ+H+F++++A S V++ I  GGL+LI   
Sbjct: 98   VLAPMIDSHTIVVEGIVPNTRSNSNRYRIPCQIHVFAKLEASSTVKSTISRGGLVLISES 157

Query: 2205 EPMFQLXXXXXXXXXXXXXXXXXXXXXFMLVSANEDKKEGMKAMEPPSDVIKPKLFLHQK 2026
            +  F L                     F LV  N      + A EPP +VIK +LF HQK
Sbjct: 158  DTSFGLSEAVVVKEQMGNGDKRSVDKIFKLVDENVKLMGKLVAAEPPREVIKSELFAHQK 217

Query: 2025 EGLGWLVHRESCEELPPFWEEKDGGYMNVLTNFHTDKRPVPLRGGIFADDMGLGKTLTLL 1846
            EGLGWL+HRE   ELPPFWEEKDG ++N LTN+ +DKRP PLRGG+FADDMGLGKTLTLL
Sbjct: 218  EGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLTLL 277

Query: 1845 SLIATNRAEDDVALGDNXXXXXXXXXXXXXXXXXXXXXVAVNSRKKRKMSEPHIEDKEEE 1666
            SLIA +R  +                             +  S  ++K+     +D    
Sbjct: 278  SLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKT---DDVVGM 334

Query: 1665 GVRTKGTLVVCPPSVMSTWITQLTEHTRRGSFKVYLYYGGERTQIVRELQKYDLVLTTYS 1486
             V  K TL+VCPPSV+S WITQL EHT  G  KVY+Y+GGERT  V EL KYD+VLTTY 
Sbjct: 335  NVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYG 394

Query: 1485 TLAAEQNRE-SPIKKMEWFRVILDEAHVIKNEGALQSQAVIGLKAKRRWVVTGTPIQNGS 1309
            TLA E++ E SP+KKMEW R+ILDEAH IKN  A QS+ V  LKA RRW VTGTPIQNGS
Sbjct: 395  TLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGS 454

Query: 1308 LDLFSLMAFLKFEPFSIKSYWLSLVQRPLSQGNESGLSRLQILMGTISLRRVKDNIDIGL 1129
             DL+SLMAFL+FEPFSIKSYW SL+QRPL QGN+ GLSRLQ+LM TISLRR K+   IGL
Sbjct: 455  FDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGL 514

Query: 1128 PPKTIETCFVDLSARERELYDQMENEARTLVKAYICVNSVVRNYSTVLSIILRLRQICDD 949
            PPKT+ETC+V+LS  ER+LYD ME EA+ +V+  I   S++RNYSTVLSIILRLRQ+CDD
Sbjct: 515  PPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDD 574

Query: 948  IALY-PDMKLLLPSNNIEDVSNKPELLKKMVAMLQDGDDFDCPICISPPSNTIITRCAHI 772
            ++L  P+++    S ++EDV++KPELL+K+VA LQDG+DFDCPICISPP+N IITRCAHI
Sbjct: 575  MSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHI 634

Query: 771  FCRACILKALKRPNPSCPLCRQSLSESDLYLA--XXXXXXXXXXXXXXXXXXXSKVNAXX 598
            FCRACIL+ L+R  P CPLCR SL++SDLY A                     SKV+A  
Sbjct: 635  FCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALL 694

Query: 597  XXXLEDRERDPSTKSIVFSQFRKMLILLEEPLKASGFTILRLDGSMTAKKRAEVIEQFSN 418
               +  R+ +P+TKS+VFSQFRKML+LLE PLKA+GFTILRLDG+MT KKR +VI +F N
Sbjct: 695  SLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGN 754

Query: 417  QDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKKDVKIVR 238
             +     VLLASLKASGTGINLTAASRVYL +PWWNPAVEEQAMDR+HRIGQK++VK++R
Sbjct: 755  PELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIR 814

Query: 237  LITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIGMEDLRVLMAL 94
            +I ++SIEER+L LQ KKK LA EAF+R+  KD   + +ED+  LM+L
Sbjct: 815  MIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 862


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  936 bits (2420), Expect = 0.0
 Identities = 484/828 (58%), Positives = 597/828 (72%), Gaps = 4/828 (0%)
 Frame = -1

Query: 2565 FLVGFVVVRIVGLQHYSGRITGREMIGLVREPLNPYDSNAIKVLNMRSAQVGYVERDCAA 2386
            +L+GFV+  IVGL++YSGRI GREM+GLVREPLN YD+NAI+VLN RS QVG++ER  AA
Sbjct: 57   YLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIRVLNTRSEQVGHIERTVAA 116

Query: 2385 VFAPLMDAGLITLEGIVPSTPGVKQRYRLPCQVHIFSRIDAFSIVENAIEGGGLLLIPPE 2206
            V AP++D+  I +EGIVP+T     RYR+PCQ+H+F++++A S V++ I  GGL+LI   
Sbjct: 117  VLAPMIDSHTIVVEGIVPNTRSNSNRYRIPCQIHVFAKLEASSTVKSTISRGGLVLISES 176

Query: 2205 EPMFQLXXXXXXXXXXXXXXXXXXXXXFMLVSANEDKKEGMKAMEPPSDVIKPKLFLHQK 2026
            +  F L                     F LV  N      + A EPP +VIK +LF HQK
Sbjct: 177  DTSFGLSEAVVVKEQMGNGDKRSVDKIFKLVDENVKLMGKLVAAEPPREVIKSELFAHQK 236

Query: 2025 EGLGWLVHRESCEELPPFWEEKDGGYMNVLTNFHTDKRPVPLRGGIFADDMGLGKTLTLL 1846
            EGLGWL+HRE   ELPPFWEEKDG ++N LTN+ +DKRP PLRGG+FADDMGLGKTLTLL
Sbjct: 237  EGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLTLL 296

Query: 1845 SLIATNRAEDDVALGDNXXXXXXXXXXXXXXXXXXXXXVAVNSRKKRKMSEPHIEDKEEE 1666
            SLIA +R  +                             +  S  ++K+     +D    
Sbjct: 297  SLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKT---DDVVGM 353

Query: 1665 GVRTKGTLVVCPPSVMSTWITQLTEHTRRGSFKVYLYYGGERTQIVRELQKYDLVLTTYS 1486
             V  K TL+VCPPSV+S WITQL EHT  G  KVY+Y+GGERT  V EL KYD+VLTTY 
Sbjct: 354  NVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYG 413

Query: 1485 TLAAEQNRE-SPIKKMEWFRVILDEAHVIKNEGALQSQAVIGLKAKRRWVVTGTPIQNGS 1309
            TLA E++ E SP+KKMEW R+ILDEAH IKN  A QS+ V  LKA RRW VTGTPIQNGS
Sbjct: 414  TLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGS 473

Query: 1308 LDLFSLMAFLKFEPFSIKSYWLSLVQRPLSQGNESGLSRLQILMGTISLRRVKDNIDIGL 1129
             DL+SLMAFL+FEPFSIKSYW SL+QRPL QGN+ GLSRLQ+LM TISLRR K+   IGL
Sbjct: 474  FDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGL 533

Query: 1128 PPKTIETCFVDLSARERELYDQMENEARTLVKAYICVNSVVRNYSTVLSIILRLRQICDD 949
            PPKT+ETC+V+LS  ER+LYD ME EA+ +V+  I   S++RNYSTVLSIILRLRQ+CDD
Sbjct: 534  PPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDD 593

Query: 948  IALY-PDMKLLLPSNNIEDVSNKPELLKKMVAMLQDGDDFDCPICISPPSNTIITRCAHI 772
            ++L  P+++    S ++EDV++KPELL+K+VA LQDG+DFDCPICISPP+N IITRCAHI
Sbjct: 594  MSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHI 653

Query: 771  FCRACILKALKRPNPSCPLCRQSLSESDLYLA--XXXXXXXXXXXXXXXXXXXSKVNAXX 598
            FCRACIL+ L+R  P CPLCR SL++SDLY A                     SKV+A  
Sbjct: 654  FCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALL 713

Query: 597  XXXLEDRERDPSTKSIVFSQFRKMLILLEEPLKASGFTILRLDGSMTAKKRAEVIEQFSN 418
               +  R+ +P+TKS+VFSQFRKML+LLE PLKA+GFTILRLDG+MT KKR +VI +F N
Sbjct: 714  SLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGN 773

Query: 417  QDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKKDVKIVR 238
             +     VLLASLKASGTGINLTAASRVYL +PWWNPAVEEQAMDR+HRIGQK++VK++R
Sbjct: 774  PELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIR 833

Query: 237  LITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIGMEDLRVLMAL 94
            +I ++SIEER+L LQ KKK LA EAF+R+  KD   + +ED+  LM+L
Sbjct: 834  MIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVALMSL 881


>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
            gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
            RING-type; ATP-requiring DNA helicase RecQ [Medicago
            truncatula] gi|355499950|gb|AES81153.1| DNA repair
            protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  837 bits (2161), Expect = 0.0
 Identities = 455/864 (52%), Positives = 573/864 (66%), Gaps = 42/864 (4%)
 Frame = -1

Query: 2565 FLVGFVVVRIVGLQHYSGRITGREMIGLVREPLNPYDSNAIKVLNMRSAQVGYVERDCAA 2386
            +L GFV+  IVG++HYSG ITGRE++GL+REPLNPYDSNAIKVLN ++ QVGY+ER  A+
Sbjct: 16   YLAGFVMANIVGIKHYSGTITGREILGLIREPLNPYDSNAIKVLNTQTLQVGYIERAVAS 75

Query: 2385 VFAPLMDAGLITLEGIVPSTPGVKQRYRLPCQVHIFSRIDAFSIVENAIEGGGLLLIPPE 2206
              APL+DA +I +E IV        ++R+PCQ+HIF+   +F  V +A  G  +  I   
Sbjct: 76   ALAPLLDAHIIHVEAIVQPRSN-NNKFRIPCQIHIFAHQSSFDAVHDAFNGSNVHFISYS 134

Query: 2205 EPMFQLXXXXXXXXXXXXXXXXXXXXXFMLVSANEDK-----KEGMKA-------MEPPS 2062
            +P F L                         S N D+     +E + +       + PPS
Sbjct: 135  DPSFTLSHSAAVKETRADTFNSDSVTTGNNNSKNLDQIFKLVRENLASKTLVSEPLNPPS 194

Query: 2061 DVIKPKLFLHQKEGLGWLVHRESCEELPPFWEEKDGGYMNVLTNFHTDKRPVPLRGGIFA 1882
             +IK +L  HQKE LGWL HRES ++LPPFWEEK G ++NVLTN+ T+ RP PLRGGIFA
Sbjct: 195  SIIKSELLQHQKEALGWLYHRESTQDLPPFWEEKVGNFVNVLTNYQTNARPEPLRGGIFA 254

Query: 1881 DDMGLGKTLTLLSLIATNRAEDDVALGDNXXXXXXXXXXXXXXXXXXXXXVAVNSRKKRK 1702
            D MGLGKTLTLLSLI+ ++ +                               + S KKR 
Sbjct: 255  DGMGLGKTLTLLSLISYDKMK-------------------------------MKSGKKRG 283

Query: 1701 MSEPHIEDKEEEGVRTKGTLVVCPPSVMSTWITQLTEHTRRGSFKVYLYYGGERTQIVRE 1522
             S   +E  E E   T GTL+VCPPSV+STWITQL EHT RG+ KVY+YYG  RTQ   E
Sbjct: 284  RSS--VERVESE---TNGTLIVCPPSVISTWITQLEEHTNRGTLKVYMYYGDRRTQDAEE 338

Query: 1521 LQKYDLVLTTYSTLAAEQN-RESPIKKMEWFRVILDEAHVIKNEGALQSQAVIGLKAKRR 1345
            L+KYD+VLTTY+TL AE    ++P+KK+ W R++LDEAH IKN  A QSQAVI L AKRR
Sbjct: 339  LRKYDIVLTTYATLGAELRCSDTPVKKLGWRRIVLDEAHTIKNVNAGQSQAVIALNAKRR 398

Query: 1344 WVVTGTPIQNGSLDLFSLMAFLKFEPFSIKSYWLSLVQRPLSQGNESGLSRLQILMGTIS 1165
            W VTGTPIQNGS DLFSLMAFL FEPFSIKSYW SLVQRPL+QG ++G+SRLQ+LM  IS
Sbjct: 399  WAVTGTPIQNGSYDLFSLMAFLHFEPFSIKSYWQSLVQRPLNQGKQTGMSRLQVLMSAIS 458

Query: 1164 LRRVKDNIDIGLPPKTIETCFVDLSARERELYDQMENEARTLVKAYICVNSVVRNYSTVL 985
            LRR KD    GLPPK +ETC+V+LS  ER+LYD+++ E ++L+  +   + +V +YSTVL
Sbjct: 459  LRRTKDTALGGLPPKIVETCYVELSFEERKLYDEVKEEIKSLMMHHNSNDRLVSSYSTVL 518

Query: 984  SIILRLRQICDDIALYP-DMK-LLLPSNNIE----------------------DVSNKPE 877
            S+ILRLRQIC D ++ P D K  L  S +IE                       VS  PE
Sbjct: 519  SMILRLRQICADFSMVPLDFKSCLFSSTDIEGIEMNQSGCIFCYIRKFSFAGNHVSKNPE 578

Query: 876  LLKKMVAMLQDGDDFDCPICISPPSNTIITRCAHIFCRACILKALKRPNPSCPLCRQSLS 697
            LL+ ++ MLQDG+DFDCPIC+SPP++ +IT CAHIFCR CILK L+R N SCPLCR+SLS
Sbjct: 579  LLQTLIRMLQDGEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQRSNSSCPLCRRSLS 638

Query: 696  ESDLYLA-----XXXXXXXXXXXXXXXXXXXSKVNAXXXXXLEDRERDPSTKSIVFSQFR 532
            E++L+ A                        +KV+       E R+++P+TKS+VFSQFR
Sbjct: 639  ETELFSAPPESFKTDDTDVTTELCTAEVRSSTKVSTLIKLLTESRDQNPATKSVVFSQFR 698

Query: 531  KMLILLEEPLKASGFTILRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKASGTGINL 352
            KML+LLEEPLKA+GF  LRLDG+M AK+RA+VIEQF   +     +LLASL+AS TGINL
Sbjct: 699  KMLLLLEEPLKAAGFKTLRLDGTMNAKQRAQVIEQFQLSEVDEPMILLASLRASSTGINL 758

Query: 351  TAASRVYLLEPWWNPAVEEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQDKKKMLA 172
            TAASRVYL+EPWWNPAVEEQAMDRVHRIGQK++VKIVRLI K+SIEE+IL LQ+KKK   
Sbjct: 759  TAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEEKILMLQEKKKKTI 818

Query: 171  REAFRRKDGKDAGRIGMEDLRVLM 100
                  +  +D   +G+EDL  ++
Sbjct: 819  TSRGSGRRSRDIAGMGIEDLHFVL 842