BLASTX nr result

ID: Coptis21_contig00014570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014570
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40409.3| unnamed protein product [Vitis vinifera]              295   6e-78
ref|XP_002276965.1| PREDICTED: 3-methyl-2-oxobutanoate hydroxyme...   295   6e-78
ref|XP_002454906.1| hypothetical protein SORBIDRAFT_03g001200 [S...   293   4e-77
ref|XP_002320828.1| ketopantoate hydroxymethyltransferase [Popul...   291   9e-77
ref|NP_191712.1| Phosphoenolpyruvate carboxylase family protein ...   291   1e-76

>emb|CBI40409.3| unnamed protein product [Vitis vinifera]
          Length = 271

 Score =  295 bits (756), Expect = 6e-78
 Identities = 143/172 (83%), Positives = 157/172 (91%)
 Frame = +1

Query: 1   PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKSVASAVKVVETAMALQEAGCF 180
           PSRITAAK+IVEAGIAVMGHVGLTPQAISVLGGFRPQGK++ASAVKVVETAMALQEAGCF
Sbjct: 72  PSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNIASAVKVVETAMALQEAGCF 131

Query: 181 SVVLECXXXXXXXXXTSALRIPTIGIGAGPYCGGQVLVYHDLLGMLQHPHHAKVTPKFCK 360
           +VVLEC         TSALRIPTIGIGAGP+C GQVLVYHDLLGM+QHPHHAKVTPKFCK
Sbjct: 132 AVVLECVPAPVAAATTSALRIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCK 191

Query: 361 QYGRVGDVINKALSEYKEEVTNRSFPGPSHTPYKISDSDVDGFLNELHKMGL 516
           +YG+VG+VINKAL EYKEEVTN SFPGP+H+PYKI  ++VDGFLNEL K+GL
Sbjct: 192 RYGQVGEVINKALLEYKEEVTNGSFPGPAHSPYKICSAEVDGFLNELQKLGL 243


>ref|XP_002276965.1| PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase [Vitis
           vinifera]
          Length = 363

 Score =  295 bits (756), Expect = 6e-78
 Identities = 143/172 (83%), Positives = 157/172 (91%)
 Frame = +1

Query: 1   PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKSVASAVKVVETAMALQEAGCF 180
           PSRITAAK+IVEAGIAVMGHVGLTPQAISVLGGFRPQGK++ASAVKVVETAMALQEAGCF
Sbjct: 164 PSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNIASAVKVVETAMALQEAGCF 223

Query: 181 SVVLECXXXXXXXXXTSALRIPTIGIGAGPYCGGQVLVYHDLLGMLQHPHHAKVTPKFCK 360
           +VVLEC         TSALRIPTIGIGAGP+C GQVLVYHDLLGM+QHPHHAKVTPKFCK
Sbjct: 224 AVVLECVPAPVAAATTSALRIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCK 283

Query: 361 QYGRVGDVINKALSEYKEEVTNRSFPGPSHTPYKISDSDVDGFLNELHKMGL 516
           +YG+VG+VINKAL EYKEEVTN SFPGP+H+PYKI  ++VDGFLNEL K+GL
Sbjct: 284 RYGQVGEVINKALLEYKEEVTNGSFPGPAHSPYKICSAEVDGFLNELQKLGL 335


>ref|XP_002454906.1| hypothetical protein SORBIDRAFT_03g001200 [Sorghum bicolor]
           gi|241926881|gb|EES00026.1| hypothetical protein
           SORBIDRAFT_03g001200 [Sorghum bicolor]
          Length = 353

 Score =  293 bits (749), Expect = 4e-77
 Identities = 144/172 (83%), Positives = 153/172 (88%)
 Frame = +1

Query: 1   PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKSVASAVKVVETAMALQEAGCF 180
           PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGK+V SAVKVVETA+ALQEAGCF
Sbjct: 159 PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKTVDSAVKVVETALALQEAGCF 218

Query: 181 SVVLECXXXXXXXXXTSALRIPTIGIGAGPYCGGQVLVYHDLLGMLQHPHHAKVTPKFCK 360
           SVVLEC         TSAL+IPTIGIGAGP+C GQVLVYHDLLGML+HPHHAKVTPKFCK
Sbjct: 219 SVVLECVPAPVAAAATSALKIPTIGIGAGPFCSGQVLVYHDLLGMLRHPHHAKVTPKFCK 278

Query: 361 QYGRVGDVINKALSEYKEEVTNRSFPGPSHTPYKISDSDVDGFLNELHKMGL 516
           Q+G VGDVINKALSEYK+EV   SFPGPSHTPYKI+ +DVDGF N L KMGL
Sbjct: 279 QFGNVGDVINKALSEYKQEVETHSFPGPSHTPYKITPTDVDGFANALQKMGL 330


>ref|XP_002320828.1| ketopantoate hydroxymethyltransferase [Populus trichocarpa]
           gi|222861601|gb|EEE99143.1| ketopantoate
           hydroxymethyltransferase [Populus trichocarpa]
          Length = 360

 Score =  291 bits (746), Expect = 9e-77
 Identities = 140/172 (81%), Positives = 156/172 (90%)
 Frame = +1

Query: 1   PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKSVASAVKVVETAMALQEAGCF 180
           PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGK++ASAVKVVETA+ALQEAGCF
Sbjct: 163 PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNIASAVKVVETALALQEAGCF 222

Query: 181 SVVLECXXXXXXXXXTSALRIPTIGIGAGPYCGGQVLVYHDLLGMLQHPHHAKVTPKFCK 360
           SVVLEC         TSAL+IPTIGIGAGP+C GQVLVYHDLLGM+QHPHHAKVTPKFCK
Sbjct: 223 SVVLECVPAPVAAAATSALKIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCK 282

Query: 361 QYGRVGDVINKALSEYKEEVTNRSFPGPSHTPYKISDSDVDGFLNELHKMGL 516
           QY  VGDVINKAL EYKEEV N SFPGP+H+PYKIS+++++GF++EL K+GL
Sbjct: 283 QYAHVGDVINKALVEYKEEVANGSFPGPAHSPYKISETEINGFMSELQKLGL 334


>ref|NP_191712.1| Phosphoenolpyruvate carboxylase family protein [Arabidopsis
           thaliana] gi|42572757|ref|NP_974474.1|
           Phosphoenolpyruvate carboxylase family protein
           [Arabidopsis thaliana] gi|6850844|emb|CAB71083.1|
           3-methyl-2-oxobutanoate hydroxy-methyl-transferase-like
           protein [Arabidopsis thaliana]
           gi|21593121|gb|AAM65070.1| 3-methyl-2-oxobutanoate
           hydroxy-methyl-transferase-like protein [Arabidopsis
           thaliana] gi|94442441|gb|ABF19008.1| At3g61530
           [Arabidopsis thaliana] gi|332646697|gb|AEE80218.1|
           Phosphoenolpyruvate carboxylase family protein
           [Arabidopsis thaliana] gi|332646698|gb|AEE80219.1|
           Phosphoenolpyruvate carboxylase family protein
           [Arabidopsis thaliana]
          Length = 354

 Score =  291 bits (745), Expect = 1e-76
 Identities = 142/172 (82%), Positives = 154/172 (89%)
 Frame = +1

Query: 1   PSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKSVASAVKVVETAMALQEAGCF 180
           PSRITAAK+IVEAGIAVMGHVGLTPQAISVLGGFRPQGK++ASAVKVVETAMALQEAGCF
Sbjct: 160 PSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNIASAVKVVETAMALQEAGCF 219

Query: 181 SVVLECXXXXXXXXXTSALRIPTIGIGAGPYCGGQVLVYHDLLGMLQHPHHAKVTPKFCK 360
           SVVLEC         TSAL IPTIGIGAGP+C GQVLVYHDLLGM+QHPHHAKVTPKFCK
Sbjct: 220 SVVLECVPPPVAAAATSALNIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCK 279

Query: 361 QYGRVGDVINKALSEYKEEVTNRSFPGPSHTPYKISDSDVDGFLNELHKMGL 516
           QY +VG+VINKAL EYKEEV+   FPGPSH+PYKIS SD+DGFL+EL K+GL
Sbjct: 280 QYAQVGEVINKALLEYKEEVSKHLFPGPSHSPYKISSSDLDGFLSELQKLGL 331


Top