BLASTX nr result

ID: Coptis21_contig00014566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014566
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   140   3e-31
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   138   1e-30
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]   136   5e-30
emb|CBI31915.3| unnamed protein product [Vitis vinifera]              135   9e-30
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   135   9e-30

>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  140 bits (353), Expect = 3e-31
 Identities = 75/185 (40%), Positives = 104/185 (56%), Gaps = 1/185 (0%)
 Frame = +1

Query: 118 MAYHGC-INGTIKGVNYSSPVPVIGLYIAAASFLYMAMMLYDIGSGFCARKRWLPCKSFK 294
           M   GC  +G +    +S P+P+IG+Y+A AS +    M  D+  GF  RK W PCK F 
Sbjct: 1   MGILGCDAHGDLNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFS 60

Query: 295 LNALTLTLLGIAAKLPVDLTTDMPSQKDQLSKLTGTAFICISMAFLVPSLGVNSESECFT 474
           LNA +LT + +  KL VDL T MPS++DQL+KL+ T F+C  M   +PSLG+   ++   
Sbjct: 61  LNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLM 120

Query: 475 NLIALSLVVITVAVNICLQLYTRVIVLFIPEHIXXXXXXXXXXXXXWHISSKVKIHKRIA 654
           NL+AL ++VIT  VNIC+QL T  I +F  EH                 ++ V   KRI 
Sbjct: 121 NLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVPTTKRIL 180

Query: 655 SDRYK 669
             +YK
Sbjct: 181 EAKYK 185


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  138 bits (347), Expect = 1e-30
 Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
 Frame = +1

Query: 118 MAYHGC-INGTIKGVNYSSPVPVIGLYIAAASFLYMAMMLYDIGSGFCARKRWLPCKSFK 294
           M   GC  +G +    +S P+P IG+Y+A AS +    M  D+  GF  RK W PCK F 
Sbjct: 1   MGILGCDAHGDLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFS 60

Query: 295 LNALTLTLLGIAAKLPVDLTTDMPSQKDQLSKLTGTAFICISMAFLVPSLGVNSESECFT 474
           LNA +LT + +  KL VDL T MPS++DQL+KL+ T F+C  M   +PSLG+   ++   
Sbjct: 61  LNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLM 120

Query: 475 NLIALSLVVITVAVNICLQLYTRVIVLFIPEHIXXXXXXXXXXXXXWHISSKVKIHKRIA 654
           NL+AL ++VIT  VNIC+QL T  I +F  EH                 ++ V   KRI 
Sbjct: 121 NLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVPTTKRIL 180

Query: 655 SDRY 666
             +Y
Sbjct: 181 ESKY 184


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score =  136 bits (342), Expect = 5e-30
 Identities = 67/154 (43%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
 Frame = +1

Query: 112 KKMAYHGC-INGTIKGVNYSSPVPVIGLYIAAASFLYMAMMLYDIGSGFCARKRWLPCKS 288
           KKM + GC I+G++   N++ P+P IG+Y+AAAS +    M  D    F   K W PCK 
Sbjct: 31  KKMVWQGCSIHGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLAFRHTKFWFPCKV 90

Query: 289 FKLNALTLTLLGIAAKLPVDLTTDMPSQKDQLSKLTGTAFICISMAFLVPSLGVNSESEC 468
           F LN  +LT++ +A  L VDL T MP  +DQLSKL+ T  +C  M   +PS+G     E 
Sbjct: 91  FSLNVTSLTIIAVATNLSVDLNTSMPRCQDQLSKLSSTVLMCTVMGNFMPSIGTTENKEV 150

Query: 469 FTNLIALSLVVITVAVNICLQLYTRVIVLFIPEH 570
           F+N+IAL +++IT+ VN+C+++ T VI +F  EH
Sbjct: 151 FSNVIALDILMITLMVNVCIKMGTGVIYVFWKEH 184


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  135 bits (340), Expect = 9e-30
 Identities = 67/152 (44%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
 Frame = +1

Query: 118 MAYHGC-INGTIKGVNYSSPVPVIGLYIAAASFLYMAMMLYDIGSGFCARKRWLPCKSFK 294
           M + GC I+G++   N++ P+P IG+Y+AAAS +    M  D       +K W PCK F 
Sbjct: 1   MVWQGCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFS 60

Query: 295 LNALTLTLLGIAAKLPVDLTTDMPSQKDQLSKLTGTAFICISMAFLVPSLGVNSESECFT 474
           LNA +LT++ +A KL VDL T MP  +DQLSKL+ T  +C  M   +PS+G     E F+
Sbjct: 61  LNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFS 120

Query: 475 NLIALSLVVITVAVNICLQLYTRVIVLFIPEH 570
           N+IAL ++VIT+ VN+C+Q+ T VI ++  EH
Sbjct: 121 NVIALGILVITLMVNVCIQMGTGVIYVYWKEH 152


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  135 bits (340), Expect = 9e-30
 Identities = 67/152 (44%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
 Frame = +1

Query: 118 MAYHGC-INGTIKGVNYSSPVPVIGLYIAAASFLYMAMMLYDIGSGFCARKRWLPCKSFK 294
           M + GC I+G++   N++ P+P IG+Y+AAAS +    M  D       +K W PCK F 
Sbjct: 1   MVWQGCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFS 60

Query: 295 LNALTLTLLGIAAKLPVDLTTDMPSQKDQLSKLTGTAFICISMAFLVPSLGVNSESECFT 474
           LNA +LT++ +A KL VDL T MP  +DQLSKL+ T  +C  M   +PS+G     E F+
Sbjct: 61  LNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFS 120

Query: 475 NLIALSLVVITVAVNICLQLYTRVIVLFIPEH 570
           N+IAL ++VIT+ VN+C+Q+ T VI ++  EH
Sbjct: 121 NVIALGILVITLMVNVCIQMGTGVIYVYWKEH 152


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