BLASTX nr result

ID: Coptis21_contig00014554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014554
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268336.2| PREDICTED: nucleolar complex protein 2 homol...   110   1e-22
emb|CBI24319.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CAN81729.1| hypothetical protein VITISV_040115 [Vitis vinifera]   109   3e-22
ref|XP_003547025.1| PREDICTED: nucleolar complex protein 2 homol...    99   3e-19
ref|XP_003592650.1| Nucleolar complex protein-like protein [Medi...    99   3e-19

>ref|XP_002268336.2| PREDICTED: nucleolar complex protein 2 homolog [Vitis vinifera]
          Length = 744

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 69/80 (86%)
 Frame = -3

Query: 242 LIHQIEVNAEFTNAKRATVTFLPNDTAASLFLEDEKKSRSSPLSQYLVSLHQRAQQRNDS 63
           LIH I+ N+EFTN +R  ++FLPND AA+ FLE EKKS +SPLSQY+ +LHQRAQQRN+S
Sbjct: 522 LIHNIQANSEFTNERRMCISFLPNDPAATTFLEAEKKSGASPLSQYVATLHQRAQQRNES 581

Query: 62  MVESSVVVGARSSLFGSKIS 3
           ++ SSV+VG+RSS+FG+K+S
Sbjct: 582 LMGSSVLVGSRSSIFGNKMS 601


>emb|CBI24319.3| unnamed protein product [Vitis vinifera]
          Length = 776

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 69/80 (86%)
 Frame = -3

Query: 242 LIHQIEVNAEFTNAKRATVTFLPNDTAASLFLEDEKKSRSSPLSQYLVSLHQRAQQRNDS 63
           LIH I+ N+EFTN +R  ++FLPND AA+ FLE EKKS +SPLSQY+ +LHQRAQQRN+S
Sbjct: 554 LIHNIQANSEFTNERRMCISFLPNDPAATTFLEAEKKSGASPLSQYVATLHQRAQQRNES 613

Query: 62  MVESSVVVGARSSLFGSKIS 3
           ++ SSV+VG+RSS+FG+K+S
Sbjct: 614 LMGSSVLVGSRSSIFGNKMS 633


>emb|CAN81729.1| hypothetical protein VITISV_040115 [Vitis vinifera]
          Length = 883

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/80 (63%), Positives = 69/80 (86%)
 Frame = -3

Query: 242 LIHQIEVNAEFTNAKRATVTFLPNDTAASLFLEDEKKSRSSPLSQYLVSLHQRAQQRNDS 63
           LIH I+ N+EFTN +R  ++FLPND AA+ FLE EKKS +SPLS+Y+ +LHQRAQQRN+S
Sbjct: 661 LIHNIQANSEFTNERRMCISFLPNDPAATTFLEAEKKSGASPLSEYVATLHQRAQQRNES 720

Query: 62  MVESSVVVGARSSLFGSKIS 3
           ++ SSV+VG+RSS+FG+K+S
Sbjct: 721 LMGSSVLVGSRSSIFGNKMS 740


>ref|XP_003547025.1| PREDICTED: nucleolar complex protein 2 homolog [Glycine max]
          Length = 817

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/80 (60%), Positives = 67/80 (83%)
 Frame = -3

Query: 242 LIHQIEVNAEFTNAKRATVTFLPNDTAASLFLEDEKKSRSSPLSQYLVSLHQRAQQRNDS 63
           LI QIE ++++ N KR +++FLPND AA+ FLEDEKK  SS LS+Y+V+LHQRA+Q+N+S
Sbjct: 645 LICQIEASSDYLNGKRLSISFLPNDPAAASFLEDEKKPASSALSKYVVTLHQRAEQKNNS 704

Query: 62  MVESSVVVGARSSLFGSKIS 3
           ++ESSV+VG  SS FG++IS
Sbjct: 705 LMESSVLVGDESSKFGNEIS 724


>ref|XP_003592650.1| Nucleolar complex protein-like protein [Medicago truncatula]
           gi|355481698|gb|AES62901.1| Nucleolar complex
           protein-like protein [Medicago truncatula]
          Length = 731

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/80 (60%), Positives = 64/80 (80%)
 Frame = -3

Query: 242 LIHQIEVNAEFTNAKRATVTFLPNDTAASLFLEDEKKSRSSPLSQYLVSLHQRAQQRNDS 63
           LI +IE N +F N +R +++FLPND AAS FLEDEKKS SS LS+Y+++L QRA+Q+NDS
Sbjct: 539 LIREIEANVQFVNERRMSISFLPNDPAASSFLEDEKKSASSALSKYVITLRQRAKQKNDS 598

Query: 62  MVESSVVVGARSSLFGSKIS 3
           + ESSV+VG  SS+FG + S
Sbjct: 599 LKESSVLVGEESSVFGDEES 618


Top