BLASTX nr result
ID: Coptis21_contig00014549
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014549
(485 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populu... 132 8e-32
ref|XP_002302153.1| predicted protein [Populus trichocarpa] gi|2... 132 8e-32
gb|ABK94272.1| unknown [Populus trichocarpa] 132 8e-32
ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|22... 129 8e-32
ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2... 131 9e-31
>gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
Length = 154
Score = 132 bits (331), Expect(2) = 8e-32
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +1
Query: 1 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 180
STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK
Sbjct: 65 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 124
Query: 181 QLADDKT 201
QL DDKT
Sbjct: 125 QLGDDKT 131
Score = 30.0 bits (66), Expect(2) = 8e-32
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 287 SVLHLVLALRGGC 325
SVLHLVLALRGGC
Sbjct: 141 SVLHLVLALRGGC 153
Score = 71.2 bits (173), Expect(2) = 1e-11
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = +1
Query: 43 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 201
I VKTLTGK I +++E +D ID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3 IFVKTLTGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
Score = 23.1 bits (48), Expect(2) = 1e-11
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 287 SVLHLVLALRGG 322
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>ref|XP_002302153.1| predicted protein [Populus trichocarpa]
gi|224082516|ref|XP_002306725.1| predicted protein
[Populus trichocarpa] gi|118485172|gb|ABK94447.1|
unknown [Populus trichocarpa]
gi|222843879|gb|EEE81426.1| predicted protein [Populus
trichocarpa] gi|222856174|gb|EEE93721.1| predicted
protein [Populus trichocarpa]
Length = 154
Score = 132 bits (331), Expect(2) = 8e-32
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +1
Query: 1 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 180
STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK
Sbjct: 65 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 124
Query: 181 QLADDKT 201
QL DDKT
Sbjct: 125 QLGDDKT 131
Score = 30.0 bits (66), Expect(2) = 8e-32
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 287 SVLHLVLALRGGC 325
SVLHLVLALRGGC
Sbjct: 141 SVLHLVLALRGGC 153
Score = 73.2 bits (178), Expect(2) = 3e-12
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +1
Query: 43 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 201
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
Score = 23.1 bits (48), Expect(2) = 3e-12
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 287 SVLHLVLALRGG 322
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>gb|ABK94272.1| unknown [Populus trichocarpa]
Length = 154
Score = 132 bits (331), Expect(2) = 8e-32
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +1
Query: 1 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 180
STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK
Sbjct: 65 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 124
Query: 181 QLADDKT 201
QL DDKT
Sbjct: 125 QLGDDKT 131
Score = 30.0 bits (66), Expect(2) = 8e-32
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 287 SVLHLVLALRGGC 325
SVLHLVLALRGGC
Sbjct: 141 SVLHLVLALRGGC 153
Score = 71.2 bits (173), Expect(2) = 1e-11
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = +1
Query: 43 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 201
I VKTLTGK I +++E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRT 55
Score = 23.1 bits (48), Expect(2) = 1e-11
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 287 SVLHLVLALRGG 322
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|223547286|gb|EEF48781.1|
ubiquitin, putative [Ricinus communis]
Length = 154
Score = 129 bits (325), Expect(2) = 8e-32
Identities = 65/67 (97%), Positives = 65/67 (97%)
Frame = +1
Query: 1 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 180
STLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGK
Sbjct: 65 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 124
Query: 181 QLADDKT 201
QL DDKT
Sbjct: 125 QLGDDKT 131
Score = 32.3 bits (72), Expect(2) = 8e-32
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 287 SVLHLVLALRGGCF 328
SVLHLVLALRGGCF
Sbjct: 141 SVLHLVLALRGGCF 154
Score = 73.2 bits (178), Expect(2) = 3e-12
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +1
Query: 43 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 201
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
Score = 23.1 bits (48), Expect(2) = 3e-12
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 287 SVLHLVLALRGG 322
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|356556999|ref|XP_003546806.1| PREDICTED:
ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|255627501|gb|ACU14095.1| unknown [Glycine max]
Length = 154
Score = 131 bits (329), Expect(2) = 9e-31
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +1
Query: 1 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGK 180
STLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLIYAGK
Sbjct: 65 STLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGK 124
Query: 181 QLADDKT 201
QLADDKT
Sbjct: 125 QLADDKT 131
Score = 27.3 bits (59), Expect(2) = 9e-31
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 287 SVLHLVLALRGGCF 328
SVLHLVLALRGG +
Sbjct: 141 SVLHLVLALRGGTY 154
Score = 73.2 bits (178), Expect(2) = 3e-12
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +1
Query: 43 IKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKT 201
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
Score = 23.1 bits (48), Expect(2) = 3e-12
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 287 SVLHLVLALRGG 322
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76