BLASTX nr result
ID: Coptis21_contig00014548
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014548 (1004 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation... 402 e-110 ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|1... 398 e-108 gb|AFK42050.1| unknown [Lotus japonicus] 391 e-106 ref|XP_002516208.1| Eukaryotic translation initiation factor 3 s... 389 e-106 gb|ABK93965.1| unknown [Populus trichocarpa] 389 e-106 >ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation factor 3 subunit K [Vitis vinifera] gi|297738508|emb|CBI27753.3| unnamed protein product [Vitis vinifera] Length = 229 Score = 402 bits (1034), Expect = e-110 Identities = 198/228 (86%), Positives = 211/228 (92%) Frame = +3 Query: 177 MGREQQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEP 356 MG +QQP YTVEQL+ LNPYNPDILPDLEN+VNEQVSSQTYSLDANLCLLRLYQFEP Sbjct: 1 MGIPKQQPQQQYTVEQLLALNPYNPDILPDLENFVNEQVSSQTYSLDANLCLLRLYQFEP 60 Query: 357 ERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW 536 ERM+TQIVARIL+KALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW Sbjct: 61 ERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW 120 Query: 537 DEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKYLEHQST 716 DEAAKNR I+EVVPGFEQAIQAYAIHVLSLTYQKVPR+V+AEAINIEGLSLDK+LEHQ Sbjct: 121 DEAAKNRHIVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVA 180 Query: 717 NCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860 NC WVLEK Q +GQLI LP NEFN P+LKK+ ADSIPLEH+ RIFPIL Sbjct: 181 NCGWVLEKSQGKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPIL 228 >ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|118488161|gb|ABK95900.1| unknown [Populus trichocarpa] gi|222833340|gb|EEE71817.1| predicted protein [Populus trichocarpa] Length = 235 Score = 398 bits (1022), Expect = e-108 Identities = 198/234 (84%), Positives = 213/234 (91%), Gaps = 6/234 (2%) Frame = +3 Query: 177 MGREQQQP------MISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 338 MGRE++ P +ISYTVEQL+ +NPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR Sbjct: 1 MGREREVPNKSEKEVISYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60 Query: 339 LYQFEPERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETA 518 LYQFEPERM+TQIVARIL+KALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLET Sbjct: 61 LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120 Query: 519 RFRQFWDEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKY 698 RFRQFWDEAAK+R I+E VPGFEQAIQAYAIH+LSLTYQKVPRSV+AEAINIEGLSLDK+ Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQAYAIHLLSLTYQKVPRSVLAEAINIEGLSLDKF 180 Query: 699 LEHQSTNCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860 LE Q NC W+LEK RGQLI LP NEFN P+LKK+TADSIPLEHVARIFPIL Sbjct: 181 LEQQVANCGWILEKSHGRGQLIVLPSNEFNHPELKKNTADSIPLEHVARIFPIL 234 >gb|AFK42050.1| unknown [Lotus japonicus] Length = 229 Score = 391 bits (1004), Expect = e-106 Identities = 186/229 (81%), Positives = 210/229 (91%) Frame = +3 Query: 177 MGREQQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEP 356 MGRE++Q + Y VEQL+ LNPYNPDILPDLENYVN+QVSSQTYSLDANLCLLRLYQFEP Sbjct: 1 MGREREQAQVGYAVEQLLALNPYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFEP 60 Query: 357 ERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW 536 E+M++QIVARIL+KALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLET RFRQFW Sbjct: 61 EKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFW 120 Query: 537 DEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKYLEHQST 716 DEAAK+R I+E VPGFEQAIQ+YA+HV+SLTYQKVPR+V+AEAIN+EGLSLDK+LEHQ Sbjct: 121 DEAAKSRHIVEAVPGFEQAIQSYAVHVISLTYQKVPRTVLAEAINVEGLSLDKFLEHQVA 180 Query: 717 NCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPILS 863 N W +EK Q +GQLI +PRNEFN P LKK+TADS+PLEH+ RIFPILS Sbjct: 181 NSGWAIEKSQGKGQLIVIPRNEFNDPILKKNTADSVPLEHITRIFPILS 229 >ref|XP_002516208.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223544694|gb|EEF46210.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 236 Score = 389 bits (1000), Expect = e-106 Identities = 189/235 (80%), Positives = 211/235 (89%), Gaps = 7/235 (2%) Frame = +3 Query: 177 MGRE-------QQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLL 335 MGRE QQQ +SYTVEQL+ +NPYNPD+LPDLENYVN+QVSSQTYSLDANLCLL Sbjct: 1 MGRERETQKSQQQQQQVSYTVEQLVAVNPYNPDVLPDLENYVNKQVSSQTYSLDANLCLL 60 Query: 336 RLYQFEPERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLET 515 RLYQFEPERM+TQIVARIL+KALMA+PAPDFSLCLFLIPERVQMEEQ K LIVLSH+LET Sbjct: 61 RLYQFEPERMSTQIVARILVKALMALPAPDFSLCLFLIPERVQMEEQLKNLIVLSHFLET 120 Query: 516 ARFRQFWDEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDK 695 RFRQFWDEAAK+R I+E VPGFEQA+QAYAIH+LSLTYQKVPRSV+AEAIN+E LSLDK Sbjct: 121 GRFRQFWDEAAKSRHIVEAVPGFEQAVQAYAIHLLSLTYQKVPRSVLAEAINVEALSLDK 180 Query: 696 YLEHQSTNCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860 +LEHQ NC W++EKG +GQLI LP NEFN P+LKK+TAD+IPLEHVARIFPIL Sbjct: 181 FLEHQVANCGWIIEKGHGKGQLIVLPSNEFNHPELKKNTADTIPLEHVARIFPIL 235 >gb|ABK93965.1| unknown [Populus trichocarpa] Length = 238 Score = 389 bits (1000), Expect = e-106 Identities = 190/226 (84%), Positives = 207/226 (91%) Frame = +3 Query: 183 REQQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEPER 362 ++QQ+ ++SYTVEQL+ +NPYNPDILPDLENYVNEQVSS TYSLDANLCLLRLYQFEPER Sbjct: 12 QQQQEEVVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSLTYSLDANLCLLRLYQFEPER 71 Query: 363 MNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFWDE 542 M+TQIVARILIKALMAMPAPDF LCLFLIPERVQMEEQFKTLIVLSHYLET RFRQFWDE Sbjct: 72 MSTQIVARILIKALMAMPAPDFGLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDE 131 Query: 543 AAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKYLEHQSTNC 722 AAKNR I+E VPGFEQAIQ YAIH+LSLTYQKVPRS++AEAINIEGLSLDK+LE Q +NC Sbjct: 132 AAKNRHIVEAVPGFEQAIQTYAIHLLSLTYQKVPRSILAEAINIEGLSLDKFLEQQVSNC 191 Query: 723 SWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860 W LEKG + QLI LP NEFN P+LKK+TADSIPLEHV RIFPIL Sbjct: 192 GWTLEKGHGQVQLIVLPSNEFNHPELKKNTADSIPLEHVTRIFPIL 237