BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014548
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation...   402   e-110
ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|1...   398   e-108
gb|AFK42050.1| unknown [Lotus japonicus]                              391   e-106
ref|XP_002516208.1| Eukaryotic translation initiation factor 3 s...   389   e-106
gb|ABK93965.1| unknown [Populus trichocarpa]                          389   e-106

>ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation factor 3 subunit K
           [Vitis vinifera] gi|297738508|emb|CBI27753.3| unnamed
           protein product [Vitis vinifera]
          Length = 229

 Score =  402 bits (1034), Expect = e-110
 Identities = 198/228 (86%), Positives = 211/228 (92%)
 Frame = +3

Query: 177 MGREQQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEP 356
           MG  +QQP   YTVEQL+ LNPYNPDILPDLEN+VNEQVSSQTYSLDANLCLLRLYQFEP
Sbjct: 1   MGIPKQQPQQQYTVEQLLALNPYNPDILPDLENFVNEQVSSQTYSLDANLCLLRLYQFEP 60

Query: 357 ERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW 536
           ERM+TQIVARIL+KALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW
Sbjct: 61  ERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW 120

Query: 537 DEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKYLEHQST 716
           DEAAKNR I+EVVPGFEQAIQAYAIHVLSLTYQKVPR+V+AEAINIEGLSLDK+LEHQ  
Sbjct: 121 DEAAKNRHIVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVA 180

Query: 717 NCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860
           NC WVLEK Q +GQLI LP NEFN P+LKK+ ADSIPLEH+ RIFPIL
Sbjct: 181 NCGWVLEKSQGKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPIL 228


>ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|118488161|gb|ABK95900.1|
           unknown [Populus trichocarpa]
           gi|222833340|gb|EEE71817.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score =  398 bits (1022), Expect = e-108
 Identities = 198/234 (84%), Positives = 213/234 (91%), Gaps = 6/234 (2%)
 Frame = +3

Query: 177 MGREQQQP------MISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 338
           MGRE++ P      +ISYTVEQL+ +NPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR
Sbjct: 1   MGREREVPNKSEKEVISYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 339 LYQFEPERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETA 518
           LYQFEPERM+TQIVARIL+KALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLET 
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120

Query: 519 RFRQFWDEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKY 698
           RFRQFWDEAAK+R I+E VPGFEQAIQAYAIH+LSLTYQKVPRSV+AEAINIEGLSLDK+
Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQAYAIHLLSLTYQKVPRSVLAEAINIEGLSLDKF 180

Query: 699 LEHQSTNCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860
           LE Q  NC W+LEK   RGQLI LP NEFN P+LKK+TADSIPLEHVARIFPIL
Sbjct: 181 LEQQVANCGWILEKSHGRGQLIVLPSNEFNHPELKKNTADSIPLEHVARIFPIL 234


>gb|AFK42050.1| unknown [Lotus japonicus]
          Length = 229

 Score =  391 bits (1004), Expect = e-106
 Identities = 186/229 (81%), Positives = 210/229 (91%)
 Frame = +3

Query: 177 MGREQQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEP 356
           MGRE++Q  + Y VEQL+ LNPYNPDILPDLENYVN+QVSSQTYSLDANLCLLRLYQFEP
Sbjct: 1   MGREREQAQVGYAVEQLLALNPYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFEP 60

Query: 357 ERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW 536
           E+M++QIVARIL+KALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLET RFRQFW
Sbjct: 61  EKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFW 120

Query: 537 DEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKYLEHQST 716
           DEAAK+R I+E VPGFEQAIQ+YA+HV+SLTYQKVPR+V+AEAIN+EGLSLDK+LEHQ  
Sbjct: 121 DEAAKSRHIVEAVPGFEQAIQSYAVHVISLTYQKVPRTVLAEAINVEGLSLDKFLEHQVA 180

Query: 717 NCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPILS 863
           N  W +EK Q +GQLI +PRNEFN P LKK+TADS+PLEH+ RIFPILS
Sbjct: 181 NSGWAIEKSQGKGQLIVIPRNEFNDPILKKNTADSVPLEHITRIFPILS 229


>ref|XP_002516208.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223544694|gb|EEF46210.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 236

 Score =  389 bits (1000), Expect = e-106
 Identities = 189/235 (80%), Positives = 211/235 (89%), Gaps = 7/235 (2%)
 Frame = +3

Query: 177 MGRE-------QQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLL 335
           MGRE       QQQ  +SYTVEQL+ +NPYNPD+LPDLENYVN+QVSSQTYSLDANLCLL
Sbjct: 1   MGRERETQKSQQQQQQVSYTVEQLVAVNPYNPDVLPDLENYVNKQVSSQTYSLDANLCLL 60

Query: 336 RLYQFEPERMNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLET 515
           RLYQFEPERM+TQIVARIL+KALMA+PAPDFSLCLFLIPERVQMEEQ K LIVLSH+LET
Sbjct: 61  RLYQFEPERMSTQIVARILVKALMALPAPDFSLCLFLIPERVQMEEQLKNLIVLSHFLET 120

Query: 516 ARFRQFWDEAAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDK 695
            RFRQFWDEAAK+R I+E VPGFEQA+QAYAIH+LSLTYQKVPRSV+AEAIN+E LSLDK
Sbjct: 121 GRFRQFWDEAAKSRHIVEAVPGFEQAVQAYAIHLLSLTYQKVPRSVLAEAINVEALSLDK 180

Query: 696 YLEHQSTNCSWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860
           +LEHQ  NC W++EKG  +GQLI LP NEFN P+LKK+TAD+IPLEHVARIFPIL
Sbjct: 181 FLEHQVANCGWIIEKGHGKGQLIVLPSNEFNHPELKKNTADTIPLEHVARIFPIL 235


>gb|ABK93965.1| unknown [Populus trichocarpa]
          Length = 238

 Score =  389 bits (1000), Expect = e-106
 Identities = 190/226 (84%), Positives = 207/226 (91%)
 Frame = +3

Query: 183 REQQQPMISYTVEQLITLNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEPER 362
           ++QQ+ ++SYTVEQL+ +NPYNPDILPDLENYVNEQVSS TYSLDANLCLLRLYQFEPER
Sbjct: 12  QQQQEEVVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSLTYSLDANLCLLRLYQFEPER 71

Query: 363 MNTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFWDE 542
           M+TQIVARILIKALMAMPAPDF LCLFLIPERVQMEEQFKTLIVLSHYLET RFRQFWDE
Sbjct: 72  MSTQIVARILIKALMAMPAPDFGLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDE 131

Query: 543 AAKNRSILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEGLSLDKYLEHQSTNC 722
           AAKNR I+E VPGFEQAIQ YAIH+LSLTYQKVPRS++AEAINIEGLSLDK+LE Q +NC
Sbjct: 132 AAKNRHIVEAVPGFEQAIQTYAIHLLSLTYQKVPRSILAEAINIEGLSLDKFLEQQVSNC 191

Query: 723 SWVLEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 860
            W LEKG  + QLI LP NEFN P+LKK+TADSIPLEHV RIFPIL
Sbjct: 192 GWTLEKGHGQVQLIVLPSNEFNHPELKKNTADSIPLEHVTRIFPIL 237