BLASTX nr result
ID: Coptis21_contig00014546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014546
(771 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 111 1e-22
ref|XP_002326984.1| predicted protein [Populus trichocarpa] gi|2... 92 2e-16
ref|XP_002520510.1| transcription initiation factor, putative [R... 88 2e-15
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2... 87 3e-15
ref|XP_002510115.1| transcription initiation factor, putative [R... 86 9e-15
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 111 bits (278), Expect = 1e-22
Identities = 57/125 (45%), Positives = 80/125 (64%)
Frame = +2
Query: 392 KTPSDPNQVLTPKVEASSNSSFPTPESNSQKSRESEHSSDSQRMHVSKVSSSSVGTNNQE 571
KTPS+ + + + ++ ++SS+PT E+NSQK RE E SDS M S++SSSS+ + QE
Sbjct: 281 KTPSNSSHMPSSAMKVQTDSSYPTTETNSQKPREMERQSDSHGMQGSQMSSSSLSSAKQE 340
Query: 572 RDLPTVPPRGPNKQHQQHLHLPPTSYPMYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDS 751
R+ +P +GPNKQ QQHLH T + MYG NY H Y+G ++ S+T Q DS
Sbjct: 341 REHSVMPMQGPNKQQQQHLHFSQTPFTMYGSAGGNY--HSYTGTNVNTSATSTKQQPHDS 398
Query: 752 QVRQV 766
Q+RQV
Sbjct: 399 QMRQV 403
Score = 72.4 bits (176), Expect = 1e-10
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +1
Query: 1 VSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMRNIVGDQMLRQAVHKIQ 180
+ FG++LP ++P L+KDRA+QL+ LY KL+KNEI K FVR MR IVGDQML+ AV
Sbjct: 200 IPFGMLLPSIIPHLDKDRALQLRTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLAVDAWN 259
Query: 181 VQQDQTKAQ 207
Q ++ Q
Sbjct: 260 YQTGPSQFQ 268
>ref|XP_002326984.1| predicted protein [Populus trichocarpa] gi|222835299|gb|EEE73734.1|
predicted protein [Populus trichocarpa]
Length = 619
Score = 91.7 bits (226), Expect = 2e-16
Identities = 51/124 (41%), Positives = 73/124 (58%)
Frame = +2
Query: 398 PSDPNQVLTPKVEASSNSSFPTPESNSQKSRESEHSSDSQRMHVSKVSSSSVGTNNQERD 577
P++P+ V+ ++SS NSQKS+ E DS M S+ SS+ +NQER+
Sbjct: 307 PAEPSHNPPSAVQLQTDSSIV----NSQKSKAVEWKPDSLVMQASQSHSSNASISNQERE 362
Query: 578 LPTVPPRGPNKQHQQHLHLPPTSYPMYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDSQV 757
++ +G NKQ QQH++ PPTS+PMYG + NY HPYSG ++ S + PQ D Q
Sbjct: 363 RSSISMQGQNKQ-QQHVNFPPTSFPMYGSSGGNY--HPYSGTNVSTSGPSVKPQPHDPQT 419
Query: 758 RQVL 769
RQ+L
Sbjct: 420 RQIL 423
Score = 79.0 bits (193), Expect = 1e-12
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 1 VSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMRNIVGDQMLRQAVHKIQ 180
+ F ++LP L P L+KDR MQLQ LY KLRKNEI KD FVR MRNIVGDQ+LR A ++Q
Sbjct: 193 IPFAILLPALKPHLDKDREMQLQTLYNKLRKNEIAKDQFVRLMRNIVGDQVLRLAAAQLQ 252
Query: 181 VQ 186
Q
Sbjct: 253 SQ 254
>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
gi|223540352|gb|EEF41923.1| transcription initiation
factor, putative [Ricinus communis]
Length = 927
Score = 87.8 bits (216), Expect = 2e-15
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Frame = +2
Query: 431 VEASSNSSFPTPESNSQKSRESEHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNK 610
V+A ++SS P+ E+N+QKS+E E +S M VS++SSSS +Q+ + + G NK
Sbjct: 257 VQAQADSSCPSAENNAQKSQEVECQPNSHGMQVSQLSSSSTRALSQDSNCSLISVPGHNK 316
Query: 611 ---QHQQHLHLPPTSYPMYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDSQVRQV 766
Q QQHLH P S+PMYG N+ + PYSG + S + + PQ+ D Q+R++
Sbjct: 317 QQQQEQQHLHFPQNSFPMYGNNSGTH--RPYSGTNFNTSGSSMRPQSHDLQMRKI 369
Score = 63.2 bits (152), Expect = 6e-08
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +1
Query: 1 VSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMRNIVGDQMLRQAVHKIQ 180
+SF +LP L P L+KDR M LQ L+ +LRK++I K+ FVR M+ IVG+Q LR A+ ++Q
Sbjct: 165 LSFESLLPFLKPHLDKDREMHLQTLFDELRKSKIVKEQFVRLMKGIVGEQALRLALAQLQ 224
Query: 181 VQQDQTKAQ 207
Q ++Q
Sbjct: 225 SQPGSNQSQ 233
>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
predicted protein [Populus trichocarpa]
Length = 875
Score = 87.4 bits (215), Expect = 3e-15
Identities = 45/98 (45%), Positives = 61/98 (62%)
Frame = +2
Query: 473 NSQKSRESEHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNKQHQQHLHLPPTSYP 652
NSQKS+ E DS M S+ SS+ +NQER+ ++ +G NKQ QQH++ PPTS+P
Sbjct: 281 NSQKSKAVEWKPDSLVMQASQSHSSNASISNQERERSSISMQGQNKQ-QQHVNFPPTSFP 339
Query: 653 MYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDSQVRQV 766
MYG + NY HPYSG ++ S + PQ D Q RQ+
Sbjct: 340 MYGSSGGNY--HPYSGTNVSTSGPSVKPQPHDPQTRQI 375
Score = 79.0 bits (193), Expect = 1e-12
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +1
Query: 1 VSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMRNIVGDQMLRQAVHKIQ 180
+ F ++LP L P L+KDR MQLQ LY KLRKNEI KD FVR MRNIVGDQ+LR A ++Q
Sbjct: 203 IPFAILLPALKPHLDKDREMQLQTLYNKLRKNEIAKDQFVRLMRNIVGDQVLRLAAAQLQ 262
Query: 181 VQ 186
Q
Sbjct: 263 SQ 264
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 85.9 bits (211), Expect = 9e-15
Identities = 43/112 (38%), Positives = 65/112 (58%)
Frame = +2
Query: 431 VEASSNSSFPTPESNSQKSRESEHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNK 610
V+ ++SS+P E N+ + R EH DS M S+ SS S T +Q+R+ ++ G +K
Sbjct: 293 VQVLADSSYPPAEGNAHRPRGVEHLPDSHGMQASQFSSPSTSTLSQDRERSSISVPGHSK 352
Query: 611 QHQQHLHLPPTSYPMYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDSQVRQV 766
Q QQHLH P S+ YG ++ + HPYSG +I S + + Q D Q+RQ+
Sbjct: 353 QQQQHLHFPQNSFSTYGSSSGTH--HPYSGTNINTSGSSMKTQPHDLQMRQI 402
Score = 71.2 bits (173), Expect = 2e-10
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +1
Query: 1 VSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMRNIVGDQMLRQAVHKIQ 180
+ F ++LP L P L+KDR MQL+ L+ KLR+N++ K+ FVR MR IVGDQ+LR AV + Q
Sbjct: 201 IPFMLLLPTLKPHLDKDRDMQLEILFNKLRRNQVPKEQFVRLMRGIVGDQVLRLAVEQWQ 260
Query: 181 VQQDQTKAQ 207
QQ ++Q
Sbjct: 261 SQQGSRQSQ 269