BLASTX nr result
ID: Coptis21_contig00014541
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014541 (558 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACL51019.1| F-box family protein [Citrus trifoliata] 305 4e-81 ref|XP_002297845.1| f-box family protein [Populus trichocarpa] g... 298 4e-79 ref|XP_002514903.1| conserved hypothetical protein [Ricinus comm... 297 9e-79 gb|AFB74452.1| F-box family protein [Prunus persica] 295 3e-78 gb|ACI13687.1| Fbox protein [Malus x domestica] 288 4e-76 >gb|ACL51019.1| F-box family protein [Citrus trifoliata] Length = 468 Score = 305 bits (780), Expect = 4e-81 Identities = 142/181 (78%), Positives = 160/181 (88%) Frame = +2 Query: 14 KSGSSKMVVPCKSPPAKKSRKERNSNKLLENVNVTEVMDPLIWHKLPEDLFEAVIARLPM 193 KSGS KM+ P K PP+K+SRKERN KL + + E M+ IW + PEDL+EAVIARLP+ Sbjct: 77 KSGSCKMLEPVKPPPSKRSRKERNRGKLAGSTSTAEAMEQEIWKEFPEDLYEAVIARLPI 136 Query: 194 STLFRFRSVCQKWNSLLASHSFSKHCAEVPQGYPWFYTITHENVNTGAMYDPSLKKWYHP 373 +T FRFRSVCQKWNSLL SHSFS+HCA+VPQG PWFYTITHENVN+GAMYDPSLKKW+HP Sbjct: 137 ATFFRFRSVCQKWNSLLESHSFSQHCAQVPQGNPWFYTITHENVNSGAMYDPSLKKWHHP 196 Query: 374 SISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNPLTQSFKELPIRSVRVWSRVAVGMT 553 +ISSLPTK+IILPVASA GLVCFLDIGHRNFY+CNPLTQSFKELP RSV+VWSRVAVGMT Sbjct: 197 TISSLPTKMIILPVASARGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMT 256 Query: 554 L 556 L Sbjct: 257 L 257 >ref|XP_002297845.1| f-box family protein [Populus trichocarpa] gi|222845103|gb|EEE82650.1| f-box family protein [Populus trichocarpa] Length = 481 Score = 298 bits (763), Expect = 4e-79 Identities = 140/181 (77%), Positives = 155/181 (85%) Frame = +2 Query: 14 KSGSSKMVVPCKSPPAKKSRKERNSNKLLENVNVTEVMDPLIWHKLPEDLFEAVIARLPM 193 KSGS KM+ PCK PP+KK RKERN K L + TEVM IW + PEDLFEAVIARLP+ Sbjct: 90 KSGSFKMLEPCKPPPSKKPRKERNRGKSLGTTSSTEVMQQEIWKEFPEDLFEAVIARLPI 149 Query: 194 STLFRFRSVCQKWNSLLASHSFSKHCAEVPQGYPWFYTITHENVNTGAMYDPSLKKWYHP 373 +T FRFRSVC+KWNS L S SFS+HCA+VPQ PWFYTI HENVN+GAMYDPSLKKW+HP Sbjct: 150 TTFFRFRSVCRKWNSFLDSQSFSQHCAQVPQSNPWFYTIAHENVNSGAMYDPSLKKWHHP 209 Query: 374 SISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNPLTQSFKELPIRSVRVWSRVAVGMT 553 +IS LPTK I+LPVASAGGLVCFLDIGHRNFY+CNPLTQSFKELP RSV+VWSRVAVGMT Sbjct: 210 TISYLPTKTIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPPRSVKVWSRVAVGMT 269 Query: 554 L 556 L Sbjct: 270 L 270 >ref|XP_002514903.1| conserved hypothetical protein [Ricinus communis] gi|223545954|gb|EEF47457.1| conserved hypothetical protein [Ricinus communis] Length = 470 Score = 297 bits (760), Expect = 9e-79 Identities = 137/181 (75%), Positives = 158/181 (87%) Frame = +2 Query: 14 KSGSSKMVVPCKSPPAKKSRKERNSNKLLENVNVTEVMDPLIWHKLPEDLFEAVIARLPM 193 KSG KM+ P K PP+KKS+KERN KLL N TEVM+ IW PEDLFEAVIARLP+ Sbjct: 79 KSGRCKMLEPSKPPPSKKSKKERNRGKLLGTTNTTEVMEEEIWKDFPEDLFEAVIARLPI 138 Query: 194 STLFRFRSVCQKWNSLLASHSFSKHCAEVPQGYPWFYTITHENVNTGAMYDPSLKKWYHP 373 +T FRFR+VC+KWNSLL+S SFS+HC +V Q PWFYTITHENVN+GA+YDPSLKKW+HP Sbjct: 139 ATFFRFRTVCRKWNSLLSSESFSQHCTKVLQANPWFYTITHENVNSGAIYDPSLKKWHHP 198 Query: 374 SISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNPLTQSFKELPIRSVRVWSRVAVGMT 553 +ISSLPTK+I+LPVASAGGLVCF+DIGHRNFY+CNPLTQSFKELP RSV+VWSR+AVGMT Sbjct: 199 TISSLPTKMIVLPVASAGGLVCFIDIGHRNFYVCNPLTQSFKELPARSVKVWSRIAVGMT 258 Query: 554 L 556 L Sbjct: 259 L 259 >gb|AFB74452.1| F-box family protein [Prunus persica] Length = 495 Score = 295 bits (756), Expect = 3e-78 Identities = 138/181 (76%), Positives = 155/181 (85%) Frame = +2 Query: 14 KSGSSKMVVPCKSPPAKKSRKERNSNKLLENVNVTEVMDPLIWHKLPEDLFEAVIARLPM 193 KSGS KM+ PCK PP K+SRKER K N TE M+ IW PEDL+EAVIARLP+ Sbjct: 86 KSGSLKMLEPCKPPPTKRSRKERTRGKSSGTTNTTEPMEQHIWKDFPEDLYEAVIARLPI 145 Query: 194 STLFRFRSVCQKWNSLLASHSFSKHCAEVPQGYPWFYTITHENVNTGAMYDPSLKKWYHP 373 +T FRFR+VC+KWNSLL S SFS+HCAEVPQ PWFYTITHENVN+GAMYDPSLKKW+HP Sbjct: 146 ATFFRFRTVCRKWNSLLDSESFSQHCAEVPQATPWFYTITHENVNSGAMYDPSLKKWHHP 205 Query: 374 SISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNPLTQSFKELPIRSVRVWSRVAVGMT 553 +ISSLPTK+I+LPVASAGGLVCFLDIG+RNFY+CNPL QSFKELP RSV+VWSRVAVGMT Sbjct: 206 TISSLPTKLIVLPVASAGGLVCFLDIGNRNFYVCNPLNQSFKELPARSVKVWSRVAVGMT 265 Query: 554 L 556 L Sbjct: 266 L 266 >gb|ACI13687.1| Fbox protein [Malus x domestica] Length = 472 Score = 288 bits (737), Expect = 4e-76 Identities = 134/181 (74%), Positives = 153/181 (84%) Frame = +2 Query: 14 KSGSSKMVVPCKSPPAKKSRKERNSNKLLENVNVTEVMDPLIWHKLPEDLFEAVIARLPM 193 KS S KM+ PCK PP K+SRKE+ K N TE M+ IW PEDL+EAVIARLP+ Sbjct: 81 KSRSFKMLEPCKPPPTKRSRKEQTRGKSSGTTNTTEPMEQHIWKDFPEDLYEAVIARLPV 140 Query: 194 STLFRFRSVCQKWNSLLASHSFSKHCAEVPQGYPWFYTITHENVNTGAMYDPSLKKWYHP 373 +T FRFR+VC+KWNSLL S SFS+HCAEVPQ PWFYTITHENVN+GAMYDPSLKKW+HP Sbjct: 141 ATFFRFRTVCRKWNSLLDSESFSQHCAEVPQATPWFYTITHENVNSGAMYDPSLKKWHHP 200 Query: 374 SISSLPTKVIILPVASAGGLVCFLDIGHRNFYICNPLTQSFKELPIRSVRVWSRVAVGMT 553 +I SLPTK+I+LPVASAGGLVCFLDIG+RNFY+CNPL QSFKELP RSV+VWSR+AVGMT Sbjct: 201 TIFSLPTKLIVLPVASAGGLVCFLDIGNRNFYVCNPLNQSFKELPARSVKVWSRIAVGMT 260 Query: 554 L 556 L Sbjct: 261 L 261