BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014537
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-59
emb|CBI37720.3| unnamed protein product [Vitis vinifera]              230   6e-58
ref|XP_002514404.1| conserved hypothetical protein [Ricinus comm...   212   2e-52
ref|XP_004144958.1| PREDICTED: pentatricopeptide repeat-containi...   198   3e-48
ref|XP_002873394.1| hypothetical protein ARALYDRAFT_487743 [Arab...   189   1e-45

>ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera]
          Length = 246

 Score =  236 bits (602), Expect = 1e-59
 Identities = 124/216 (57%), Positives = 161/216 (74%), Gaps = 1/216 (0%)
 Frame = +1

Query: 190 RRGIIT-NARNTGQSRKQLQRGRNLSIEAIQTVQALKRAKKDDNMVEQVFESKVRRLLKF 366
           +RGI T N R+  Q+RK LQRGRNLSIEAIQ VQALKRAK+D++ +E+VFESKVRRLLK 
Sbjct: 31  KRGIFTINMRDRSQNRKPLQRGRNLSIEAIQAVQALKRAKRDESSLERVFESKVRRLLKL 90

Query: 367 DMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFXXXXXXXXXX 546
           DM+AVL++LL QNE LLAL+VF DVRKEYWYKPQV +YA+MI++  SN            
Sbjct: 91  DMIAVLKQLLNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGLFEQVHLLLSY 150

Query: 547 XXIERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFKILVNGLESK 726
              E   L+ +TEGFNAL RTL+++  T  AM+CFQ MK   C+PN+S+F+IL+ GLESK
Sbjct: 151 LKKET-GLELETEGFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSFRILIKGLESK 209

Query: 727 GETGLSSMLRQEADKYFGWPLEYQEEEKEEINLSHN 834
           GE  +S+ ++ +A KYFG  LE+ EEE E++ + +N
Sbjct: 210 GELDISATVKLDAQKYFGESLEFLEEE-EDMTVGYN 244


>emb|CBI37720.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  230 bits (587), Expect = 6e-58
 Identities = 119/207 (57%), Positives = 155/207 (74%)
 Frame = +1

Query: 214 RNTGQSRKQLQRGRNLSIEAIQTVQALKRAKKDDNMVEQVFESKVRRLLKFDMLAVLREL 393
           R+  Q+RK LQRGRNLSIEAIQ VQALKRAK+D++ +E+VFESKVRRLLK DM+AVL++L
Sbjct: 2   RDRSQNRKPLQRGRNLSIEAIQAVQALKRAKRDESSLERVFESKVRRLLKLDMIAVLKQL 61

Query: 394 LRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFXXXXXXXXXXXXIERYHLD 573
           L QNE LLAL+VF DVRKEYWYKPQV +YA+MI++  SN               E   L+
Sbjct: 62  LNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGLFEQVHLLLSYLKKET-GLE 120

Query: 574 ADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFKILVNGLESKGETGLSSML 753
            +TEGFNAL RTL+++  T  AM+CFQ MK   C+PN+S+F+IL+ GLESKGE  +S+ +
Sbjct: 121 LETEGFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSFRILIKGLESKGELDISATV 180

Query: 754 RQEADKYFGWPLEYQEEEKEEINLSHN 834
           + +A KYFG  LE+ EEE E++ + +N
Sbjct: 181 KLDAQKYFGESLEFLEEE-EDMTVGYN 206


>ref|XP_002514404.1| conserved hypothetical protein [Ricinus communis]
           gi|223546501|gb|EEF48000.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score =  212 bits (539), Expect = 2e-52
 Identities = 109/211 (51%), Positives = 148/211 (70%), Gaps = 2/211 (0%)
 Frame = +1

Query: 190 RRGIITNARNTGQSRKQLQRGRNLSIEAIQTVQALKRAK--KDDNMVEQVFESKVRRLLK 363
           R  ++ NA+    +RKQLQ+GRNLSIE+IQ VQ+LKRA     ++ ++ VF SK  RLLK
Sbjct: 37  RMVMVVNAKGKEDNRKQLQKGRNLSIESIQAVQSLKRAYYFSTNSNLDSVFRSKFSRLLK 96

Query: 364 FDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFXXXXXXXXX 543
            DML+VLRELLRQN  LLAL+VFKD+RKEYWYKPQV +Y DMIK  ASN +         
Sbjct: 97  LDMLSVLRELLRQNHCLLALKVFKDIRKEYWYKPQVSLYDDMIKAMASNGYFEQVELLCI 156

Query: 544 XXXIERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFKILVNGLES 723
               E   ++ +T+ FNALF TL+ +  +  AM+ +  MK V+C+P+  TF+IL+NGLES
Sbjct: 157 YLKTETNLIEPETDAFNALFTTLITFNLSGFAMEFYGLMKAVKCEPDRLTFRILINGLES 216

Query: 724 KGETGLSSMLRQEADKYFGWPLEYQEEEKEE 816
            GE+  S++LRQ+A K++G  LE+ EEE++E
Sbjct: 217 MGESSASAILRQDAHKFYGQSLEFLEEEEDE 247


>ref|XP_004144958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449473007|ref|XP_004153757.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449517150|ref|XP_004165609.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 249

 Score =  198 bits (503), Expect = 3e-48
 Identities = 102/200 (51%), Positives = 142/200 (71%)
 Frame = +1

Query: 214 RNTGQSRKQLQRGRNLSIEAIQTVQALKRAKKDDNMVEQVFESKVRRLLKFDMLAVLREL 393
           R   ++RK LQ+GRNLSIEAIQ VQ+LKR KKD   +++V++SK+RRLLKFDMLAVLREL
Sbjct: 43  RGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLREL 102

Query: 394 LRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFXXXXXXXXXXXXIERYHLD 573
           LRQNE  LAL+VF+DVRKE+WYKPQV +YAD+I + ASN               E   L 
Sbjct: 103 LRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEA-DLA 161

Query: 574 ADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFKILVNGLESKGETGLSSML 753
            + +GFNAL + L+++     AM+ +  MK+V C+P++++F+I++ GLESKGE      +
Sbjct: 162 PEIDGFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTV 221

Query: 754 RQEADKYFGWPLEYQEEEKE 813
           +Q+A + +G  LE+ EEE+E
Sbjct: 222 KQDAQRLYGESLEFLEEEEE 241


>ref|XP_002873394.1| hypothetical protein ARALYDRAFT_487743 [Arabidopsis lyrata subsp.
            lyrata] gi|297319231|gb|EFH49653.1| hypothetical protein
            ARALYDRAFT_487743 [Arabidopsis lyrata subsp. lyrata]
          Length = 745

 Score =  189 bits (481), Expect = 1e-45
 Identities = 106/217 (48%), Positives = 140/217 (64%), Gaps = 9/217 (4%)
 Frame = +1

Query: 190  RRGIITNARNTGQSRKQLQRGRNLSIEAIQTVQALKRAK---------KDDNMVEQVFES 342
            RR +    R+  ++RK LQRGR LSIEAIQ VQALKRA              +V++V  S
Sbjct: 521  RRAMGIKMRDRSKNRKPLQRGRMLSIEAIQAVQALKRANPLLPPPSPSSSSALVDRVIIS 580

Query: 343  KVRRLLKFDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFXX 522
            K RRLLKFDM+AVLRELLRQNE  LAL+VF+++RKEYWYKPQV +Y DMI + A N    
Sbjct: 581  KFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLME 640

Query: 523  XXXXXXXXXXIERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFKI 702
                       E+  L AD E FN L   L+N+      MDC+ FM+ +  +P+ ++F+I
Sbjct: 641  EVNYLYSAMKSEK-GLMADIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRI 699

Query: 703  LVNGLESKGETGLSSMLRQEADKYFGWPLEYQEEEKE 813
            LV GLES GE  LS+++R++A +Y+G  LE+ EEE+E
Sbjct: 700  LVLGLESNGEMSLSAIVRKDAHEYYGESLEFIEEEEE 736