BLASTX nr result

ID: Coptis21_contig00014527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014527
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...    96   3e-18
ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...    92   3e-17
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    92   3e-17
ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichoca...    92   3e-17
ref|XP_002333828.1| BED finger-nbs resistance protein [Populus t...    92   3e-17

>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -1

Query: 319 GMEMATTTLIGRTAEKNFEMVWEWLMGDQFQNIGVYGMGGAGKTTLMKNINNRLLRQSRS 140
           G  + TT L G+  +KN EM+W WLM D+  +IG+YGMGG GK++L  +I+N+LL++  S
Sbjct: 98  GEALLTTELAGQGFDKNREMIWSWLMKDEVSSIGIYGMGGVGKSSLATHIHNQLLQRPTS 157

Query: 139 FESVLWVTVSKDVNARKLQDQIAGVVN-NLDKE 44
           F+ VLW+TVS+D +  KLQ  IA  +N NL  E
Sbjct: 158 FKHVLWITVSQDFSISKLQYLIANAINLNLSNE 190


>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/87 (47%), Positives = 61/87 (70%)
 Frame = -1

Query: 319 GMEMATTTLIGRTAEKNFEMVWEWLMGDQFQNIGVYGMGGAGKTTLMKNINNRLLRQSRS 140
           G  + TT L+G+ +++N EM+W WLM D   ++G+YGMGG GKT+L+ +I+N+LL++  S
Sbjct: 86  GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSS 145

Query: 139 FESVLWVTVSKDVNARKLQDQIAGVVN 59
           F  V WVTVS++    KLQ  IA  +N
Sbjct: 146 FNYVFWVTVSQNFTISKLQYLIAKAIN 172


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/87 (47%), Positives = 61/87 (70%)
 Frame = -1

Query: 319 GMEMATTTLIGRTAEKNFEMVWEWLMGDQFQNIGVYGMGGAGKTTLMKNINNRLLRQSRS 140
           G  + TT L+G+ +++N EM+W WLM D   ++G+YGMGG GKT+L+ +I+N+LL++  S
Sbjct: 217 GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSS 276

Query: 139 FESVLWVTVSKDVNARKLQDQIAGVVN 59
           F  V WVTVS++    KLQ  IA  +N
Sbjct: 277 FNYVFWVTVSQNFTISKLQYLIAKAIN 303


>ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860585|gb|EEE98132.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 802

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/87 (45%), Positives = 62/87 (71%)
 Frame = -1

Query: 319 GMEMATTTLIGRTAEKNFEMVWEWLMGDQFQNIGVYGMGGAGKTTLMKNINNRLLRQSRS 140
           G    TT L+GR  E+N   +W WLM D   +IG+YG+GG GKT+L+++IN++LL++  S
Sbjct: 25  GKAFQTTELVGRAFERNVSEIWSWLMKDDVLSIGIYGIGGVGKTSLLRHINDQLLQRPSS 84

Query: 139 FESVLWVTVSKDVNARKLQDQIAGVVN 59
           F++V W+TV++D +  KLQ+ IA  V+
Sbjct: 85  FQNVFWITVTQDFSIYKLQNLIAKAVD 111


>ref|XP_002333828.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222838647|gb|EEE77012.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 1153

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/87 (45%), Positives = 62/87 (71%)
 Frame = -1

Query: 319 GMEMATTTLIGRTAEKNFEMVWEWLMGDQFQNIGVYGMGGAGKTTLMKNINNRLLRQSRS 140
           G    TT L+GR  E+N   +W WLM D   +IG+YG+GG GKT+L+++IN++LL++  S
Sbjct: 145 GKAFQTTELVGRAFERNVSEIWSWLMKDDVLSIGIYGIGGVGKTSLLRHINDQLLQRPSS 204

Query: 139 FESVLWVTVSKDVNARKLQDQIAGVVN 59
           F++V W+TV++D +  KLQ+ IA  V+
Sbjct: 205 FQNVFWITVTQDFSIYKLQNLIAKAVD 231


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