BLASTX nr result

ID: Coptis21_contig00014526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014526
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20163.3| unnamed protein product [Vitis vinifera]              105   1e-20
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   105   1e-20
ref|XP_002514137.1| leucine-rich repeat-containing protein 2, lr...   100   2e-19
ref|XP_002266478.1| PREDICTED: probable disease resistance prote...   100   2e-19
gb|AAN62351.1|AF506028_18 NBS-LRR type disease resistance protei...   100   2e-19

>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  105 bits (261), Expect = 1e-20
 Identities = 76/214 (35%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
 Frame = -2

Query: 640 QTLKDKRTDLIARVDDVKEKLLIAEGEGKTRTKIVETWLNKADRVKSKVDEVQTEAEEPN 461
           +TLK+K   L +R  DVK +L  A+ + K   K VE WL +   +K  ++ ++ E  +  
Sbjct: 36  RTLKEKMERLKSREQDVKIELQNAQYQRKKEKKEVENWLKEVQNMKDDLERMEQEVGKGR 95

Query: 460 RCLCGVLPNCCSRAKLGKRMLELNEEMASLLNDGKFSEEELAISVPETVREIPTTRLIGK 281
                      SR    ++  E  E++  LL  G+F E  L   + +  R + TT+LIG+
Sbjct: 96  ---------IFSRLGFLRQSEEHIEKVDELLERGRFPEGILIDVLRDEGRALLTTQLIGE 146

Query: 280 TAEK-NFEMVWEWLIGDQFQKIGVYGMGGAGKTTSMKNINDRLRLQQQRRFENVLWVTVS 104
           T  K N E +W  L   + Q IGV+GMGG GKTT + +I++ L L+++  F  V WVTVS
Sbjct: 147 TTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHN-LLLEKKDTFGLVYWVTVS 205

Query: 103 KDVDVRKLQEQIAGVVLDQKTLETFARQDEVGRS 2
           KD  VRKLQ+    V+ ++  L+    +DE  RS
Sbjct: 206 KDSSVRKLQD----VIAEKINLDLSKEEDERLRS 235


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score =  105 bits (261), Expect = 1e-20
 Identities = 76/214 (35%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
 Frame = -2

Query: 640 QTLKDKRTDLIARVDDVKEKLLIAEGEGKTRTKIVETWLNKADRVKSKVDEVQTEAEEPN 461
           +TLK+K   L +R  DVK +L  A+ + K   K VE WL +   +K  ++ ++ E  +  
Sbjct: 36  RTLKEKMERLKSREQDVKIELQNAQYQRKKEKKEVENWLKEVQNMKDDLERMEQEVGKGR 95

Query: 460 RCLCGVLPNCCSRAKLGKRMLELNEEMASLLNDGKFSEEELAISVPETVREIPTTRLIGK 281
                      SR    ++  E  E++  LL  G+F E  L   + +  R + TT+LIG+
Sbjct: 96  ---------IFSRLGFLRQSEEHIEKVDELLERGRFPEGILIDVLRDEGRALLTTQLIGE 146

Query: 280 TAEK-NFEMVWEWLIGDQFQKIGVYGMGGAGKTTSMKNINDRLRLQQQRRFENVLWVTVS 104
           T  K N E +W  L   + Q IGV+GMGG GKTT + +I++ L L+++  F  V WVTVS
Sbjct: 147 TTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHN-LLLEKKDTFGLVYWVTVS 205

Query: 103 KDVDVRKLQEQIAGVVLDQKTLETFARQDEVGRS 2
           KD  VRKLQ+    V+ ++  L+    +DE  RS
Sbjct: 206 KDSSVRKLQD----VIAEKINLDLSKEEDERLRS 235


>ref|XP_002514137.1| leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus
           communis] gi|223546593|gb|EEF48091.1| leucine-rich
           repeat-containing protein 2, lrrc2, putative [Ricinus
           communis]
          Length = 877

 Score =  100 bits (250), Expect = 2e-19
 Identities = 67/192 (34%), Positives = 99/192 (51%)
 Frame = -2

Query: 643 LQTLKDKRTDLIARVDDVKEKLLIAEGEGKTRTKIVETWLNKADRVKSKVDEVQTEAEEP 464
           L+ LK KR D+  +VD        AE +G   T  V+ WL +   V++K   +     + 
Sbjct: 39  LEELKYKRDDIQRQVD-------CAELKGLICTCQVQGWLERVKDVETKASLITGVLGQR 91

Query: 463 NRCLCGVLPNCCSRAKLGKRMLELNEEMASLLNDGKFSEEELAISVPETVREIPTTRLIG 284
            +C    + N C+R KL KR+ EL  E+  L+  G F        V ETV+E+P    +G
Sbjct: 92  KQCFMCCVANSCTRYKLSKRVSELQMEINELIGKGAFDAVIADGLVSETVQEMPIRPSVG 151

Query: 283 KTAEKNFEMVWEWLIGDQFQKIGVYGMGGAGKTTSMKNINDRLRLQQQRRFENVLWVTVS 104
                  E V ++L  D+   IG+YGMGG GKTT +K+IN++  L +   FE V+W  VS
Sbjct: 152 --LNMMVEKVQQFLAEDEVGIIGIYGMGGIGKTTLLKSINNKF-LTKSHEFEVVIWAVVS 208

Query: 103 KDVDVRKLQEQI 68
           KD  V  +Q+ +
Sbjct: 209 KDFIVDNIQQAV 220


>ref|XP_002266478.1| PREDICTED: probable disease resistance protein At1g12280 [Vitis
           vinifera] gi|147795375|emb|CAN65320.1| hypothetical
           protein VITISV_028037 [Vitis vinifera]
          Length = 872

 Score =  100 bits (250), Expect = 2e-19
 Identities = 65/195 (33%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
 Frame = -2

Query: 643 LQTLKDKRTDLIARVDDVKEKLLIAEGEGKTRTKIVETWLNKADRVKSKVDE--VQTEAE 470
           L +L +   +L     DVKE++   E     RT+ V+ WL   + ++ +V+E  V+++ E
Sbjct: 23  LDSLANVMEELKHVYQDVKERVKREEQFQNKRTREVDAWLCSVENMEREVNELMVKSDIE 82

Query: 469 EPNRCLCGV-LPNCCSRAKLGKRMLELNEEMASLLNDGKFSEEELAISVPETVREIPTTR 293
              +CL    L NC S  KLGK + E    +A L +     +E     +   V E+P  +
Sbjct: 83  IQKKCLGSCCLTNCRSSYKLGKMIREKVAAVAELQSRADNLDEVPVPFIRPAVNEMPMEK 142

Query: 292 LIGKTAEKNFEMVWEWLIGDQFQKIGVYGMGGAGKTTSMKNINDRLRLQQQRRFENVLWV 113
            +G   +  F+ VW WL  +Q   IG+YG+GG GKTT +  IN+ + L++   F+ V+W+
Sbjct: 143 SVG--LDLLFDRVWRWLEDEQVGTIGIYGVGGVGKTTLLAKINNGV-LKRNNEFDVVIWI 199

Query: 112 TVSKDVDVRKLQEQI 68
           TVSK   + ++QEQI
Sbjct: 200 TVSKGETIERVQEQI 214


>gb|AAN62351.1|AF506028_18 NBS-LRR type disease resistance protein [Citrus trifoliata]
          Length = 899

 Score =  100 bits (250), Expect = 2e-19
 Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 5/197 (2%)
 Frame = -2

Query: 643 LQTLKDKRTDLIARVDDVKEKLLIAEGEGK-TRTKIVETWLNKADRVKSKVDE-VQTEAE 470
           ++ LK++   LIA+ DDV  +++ AE +   TR   V+ WL++ D V +  DE ++  ++
Sbjct: 37  VEALKNELPKLIAKKDDVMARVVNAERQQMMTRLNEVQLWLSRVDAVTAGADELIRIGSQ 96

Query: 469 EPNR-CLCGVLP-NCCSRAKLGKRMLELNEEMASLLNDGKFSEEELAISVPETVR-EIPT 299
           E  + CL G    NC S  K GK++ +   ++  LL +G F+   +A   PE+V  E P 
Sbjct: 97  EIEKLCLGGYCSKNCKSSKKFGKQVDKKLSDVKILLAEGSFAV--VAQRAPESVADERPI 154

Query: 298 TRLIGKTAEKNFEMVWEWLIGDQFQKIGVYGMGGAGKTTSMKNINDRLRLQQQRRFENVL 119
              +G   +   E VW  L+ +    +G+YGMGG GKTT + ++N++   Q+   F+ ++
Sbjct: 155 EPAVG--IQSQLEQVWRCLVEEPVGIVGLYGMGGVGKTTLLTHLNNKFLGQRDFHFDFLI 212

Query: 118 WVTVSKDVDVRKLQEQI 68
           WV VSKD+ + K+QE I
Sbjct: 213 WVVVSKDLQIEKIQEII 229


Top