BLASTX nr result

ID: Coptis21_contig00014513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014513
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526765.1| Makorin-1, putative [Ricinus communis] gi|22...   152   1e-48
ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makor...   151   5e-47
ref|XP_002314030.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-44
ref|XP_003599126.1| E3 ubiquitin-protein ligase makorin [Medicag...   134   7e-42
emb|CAN69574.1| hypothetical protein VITISV_028611 [Vitis vinifera]   130   8e-41

>ref|XP_002526765.1| Makorin-1, putative [Ricinus communis] gi|223533892|gb|EEF35619.1|
           Makorin-1, putative [Ricinus communis]
          Length = 361

 Score =  152 bits (383), Expect(2) = 1e-48
 Identities = 82/155 (52%), Positives = 98/155 (63%), Gaps = 12/155 (7%)
 Frame = +2

Query: 2   EFSHDWKDQSNNLCTFY*KRVCSYGSRCRYEHVKIA---TILSSSTNSIQQKASKPVEVT 172
           EFSHDWKD  NN+CT+Y K +CSYGSRCRYEHVK     +  SSST S Q  AS  +   
Sbjct: 22  EFSHDWKDPPNNICTYYQKGICSYGSRCRYEHVKPLRSDSASSSSTVSYQSLASTSI--- 78

Query: 173 CPSKISVGAEVNSNLSVHV---ELSALSSPFFPP---AWKQDSGDQNFPDDDIV---GNL 325
            P   SV    +   SVH    ELSA  +PFFPP   AW  DSG  N  ++  +    N+
Sbjct: 79  -PLVHSVRTGSSRLTSVHNASGELSASRNPFFPPSNPAWNLDSGPNNLLENGEIIEPRNV 137

Query: 326 RDVDRPICSFVAAGDCPRGDRCPHIHGDLCPTCEK 430
           +  D P+CSF AAG+CPRGD+CPH+HGDLCPTC K
Sbjct: 138 KPEDHPLCSFAAAGNCPRGDKCPHVHGDLCPTCGK 172



 Score = 66.6 bits (161), Expect(2) = 1e-48
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +3

Query: 432 NCLHPYRPDERDEHSIMCGKKKRHLDALKHSQEIECS 542
           NCLHP+RP+ER+EH   C KK++HL+ALKHSQEIECS
Sbjct: 173 NCLHPFRPEEREEHLRTCEKKQKHLEALKHSQEIECS 209


>ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Vitis
           vinifera]
          Length = 361

 Score =  151 bits (382), Expect(2) = 5e-47
 Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 9/152 (5%)
 Frame = +2

Query: 2   EFSHDWKDQSNNLCTFY*KRVCSYGSRCRYEHVKIA----TILSSSTNSIQQKASKPVEV 169
           EFSHDWK   NN+CTFY K VCSYG RCRYEHVK++    +  SSST+S Q        +
Sbjct: 22  EFSHDWKASPNNICTFYQKGVCSYGGRCRYEHVKVSHSQPSAPSSSTSSHQLLVPDSASL 81

Query: 170 TCPSKISVGAEVNSNLSVHVELSALSSPFFP---PAWKQDSGDQNFPDDDI--VGNLRDV 334
           T PS+      + +   V  E SA S P FP   PAW Q+SGDQ+F +++I      R  
Sbjct: 82  THPSRTVTNGLIPAP-GVPPEPSASSRPLFPPTQPAWNQESGDQDFLENNIGEPRTDRPA 140

Query: 335 DRPICSFVAAGDCPRGDRCPHIHGDLCPTCEK 430
           D+ ICSF AAG CPRG++CPHIHGDLCPTC K
Sbjct: 141 DQSICSFAAAGSCPRGEKCPHIHGDLCPTCGK 172



 Score = 61.6 bits (148), Expect(2) = 5e-47
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +3

Query: 432 NCLHPYRPDERDEHSIMCGKKKRHLDALKHSQEIECS 542
           +CLHP+RP+E +EH   C KK++HL+ALKHSQEIECS
Sbjct: 173 HCLHPFRPEEIEEHLRTCEKKQKHLEALKHSQEIECS 209


>ref|XP_002314030.1| predicted protein [Populus trichocarpa] gi|222850438|gb|EEE87985.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  145 bits (365), Expect(2) = 1e-44
 Identities = 74/151 (49%), Positives = 100/151 (66%), Gaps = 8/151 (5%)
 Frame = +2

Query: 2   EFSHDWKDQSNNLCTFY*KRVCSYGSRCRYEHVKIATILSSSTNSIQQKASKPVEVTCPS 181
           EFSHDWKD  NN+CTFY K +C YGSRCRY+HVK +   S++++S+   AS  V +  P+
Sbjct: 22  EFSHDWKDPPNNICTFYQKGICVYGSRCRYDHVKPSRPESTASSSLTVLASTSVSLALPA 81

Query: 182 KISVGAEVNSNLSVHVELSALSSPFF---PPAWKQDSGDQNFPDD---DIV--GNLRDVD 337
           + +V + V + L+V  ELSA S PF     PAW  +S   +F +D   +++   N++  D
Sbjct: 82  R-TVSSGVRTVLAVPPELSASSRPFIAPSTPAWDLESVQLDFLEDGDGEVIQPRNVKPAD 140

Query: 338 RPICSFVAAGDCPRGDRCPHIHGDLCPTCEK 430
           R +CSF AAG CPRGD+CPHIHGDLC  C K
Sbjct: 141 RSLCSFAAAGSCPRGDKCPHIHGDLCAYCGK 171



 Score = 60.5 bits (145), Expect(2) = 1e-44
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +3

Query: 432 NCLHPYRPDERDEHSIMCGKKKRHLDALKHSQEIECS 542
           +CLHP+RPDER+EH   C KK+++LD LK+SQEIECS
Sbjct: 172 HCLHPFRPDERNEHLKACEKKQKNLDLLKYSQEIECS 208


>ref|XP_003599126.1| E3 ubiquitin-protein ligase makorin [Medicago truncatula]
           gi|355488174|gb|AES69377.1| E3 ubiquitin-protein ligase
           makorin [Medicago truncatula]
          Length = 420

 Score =  134 bits (338), Expect(2) = 7e-42
 Identities = 69/148 (46%), Positives = 94/148 (63%), Gaps = 7/148 (4%)
 Frame = +2

Query: 2   EFSHDWKDQSNNLCTFY*KRVCSYGSRCRYEHVKIATILSSSTNSIQQKASKPVEVTCPS 181
           EFSHDWK   NN+CTFY K VC+YGSRCRY+HVK +   SS+ +S     ++   +   S
Sbjct: 22  EFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASRAQSSTPSS---SITEHQPLVSES 78

Query: 182 KISVGAEVNSN-LSVHVELSALSSPFFPP---AWKQDSGDQNF-PDDDIVGNL--RDVDR 340
            +     V SN ++   E S  S+PF  P   AW Q+S   +F  +DD+V ++     + 
Sbjct: 79  AVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQESAQLDFLREDDVVQSVITSPSEL 138

Query: 341 PICSFVAAGDCPRGDRCPHIHGDLCPTC 424
           PICSF AAG+CPRG++CPH+HGDLCP+C
Sbjct: 139 PICSFAAAGNCPRGEQCPHVHGDLCPSC 166



 Score = 61.2 bits (147), Expect(2) = 7e-42
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +3

Query: 435 CLHPYRPDERDEHSIMCGKKKRHLDALKHSQEIECS 542
           CLHP+RP+ER+EH + C  K++HL+ALK SQEIECS
Sbjct: 170 CLHPFRPEEREEHMMSCRNKQKHLEALKRSQEIECS 205


>emb|CAN69574.1| hypothetical protein VITISV_028611 [Vitis vinifera]
          Length = 428

 Score =  130 bits (328), Expect(2) = 8e-41
 Identities = 71/140 (50%), Positives = 88/140 (62%), Gaps = 9/140 (6%)
 Frame = +2

Query: 38  LCTFY*KRVCSYGSRCRYEHVKIA----TILSSSTNSIQQKASKPVEVTCPSKISVGAEV 205
           +CTFY K VCSYG RCRYEHVK++    +  SSST+S Q        +T PS+      +
Sbjct: 69  ICTFYQKGVCSYGGRCRYEHVKVSHSQPSAPSSSTSSHQLLVPDSASLTHPSRTVTNGLI 128

Query: 206 NSNLSVHVELSALSSPFFPP---AWKQDSGDQNFPDDDIVGNLRD--VDRPICSFVAAGD 370
            +   V  E SA S P FPP   AW Q+SGDQ+F +++I     D   D+ ICSF AAG 
Sbjct: 129 PAP-GVPPEPSASSRPLFPPTQPAWNQESGDQDFLENNIGEPRTDRPADQSICSFAAAGS 187

Query: 371 CPRGDRCPHIHGDLCPTCEK 430
           CPRG++CPHIHGDLCPTC K
Sbjct: 188 CPRGEKCPHIHGDLCPTCGK 207



 Score = 61.6 bits (148), Expect(2) = 8e-41
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +3

Query: 432 NCLHPYRPDERDEHSIMCGKKKRHLDALKHSQEIECS 542
           +CLHP+RP+E +EH   C KK++HL+ALKHSQEIECS
Sbjct: 208 HCLHPFRPEEIEEHLRTCEKKQKHLEALKHSQEIECS 244


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