BLASTX nr result

ID: Coptis21_contig00014505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014505
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|2...   213   3e-53
ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|2...   212   5e-53
ref|XP_002511779.1| conserved hypothetical protein [Ricinus comm...   203   2e-50
ref|XP_004144988.1| PREDICTED: LOW QUALITY PROTEIN: SPX domain-c...   202   5e-50
ref|XP_002867738.1| SPX domain-containing protein [Arabidopsis l...   202   5e-50

>ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|222845331|gb|EEE82878.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  213 bits (541), Expect = 3e-53
 Identities = 108/135 (80%), Positives = 117/135 (86%)
 Frame = -3

Query: 634 VGSYISNMFEDRQILLASEIMVCIGILISFHILGPYSVPQYVCSALITFVSAEVLEGVNX 455
           VGSYISNMFEDRQILLASEIMVC+GIL+SFHI+ PY+VPQYVCS LI FVSAEVLEGVN 
Sbjct: 360 VGSYISNMFEDRQILLASEIMVCVGILLSFHIISPYTVPQYVCSGLILFVSAEVLEGVNL 419

Query: 454 XXXXXXXXXXXXRGTYNGGLLSTEAGTLARVVADGTITLAGYLGVNRVLNVTLLPSLFIC 275
                       RGTYNGGLLSTEAGTLARVVADGTITLAGYLG +++LNVTLLPSL IC
Sbjct: 420 SLLSRVMSSRLSRGTYNGGLLSTEAGTLARVVADGTITLAGYLGESKLLNVTLLPSLVIC 479

Query: 274 VASIVATCFTYNTLY 230
           +ASIVATCFTYN+LY
Sbjct: 480 IASIVATCFTYNSLY 494


>ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|222841893|gb|EEE79440.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  212 bits (539), Expect = 5e-53
 Identities = 109/135 (80%), Positives = 116/135 (85%)
 Frame = -3

Query: 634 VGSYISNMFEDRQILLASEIMVCIGILISFHILGPYSVPQYVCSALITFVSAEVLEGVNX 455
           VGSYISNMFEDRQILL SEIMVCIGIL+SFHI+ PY+VPQYVCS LI FVSAEVLEGVN 
Sbjct: 564 VGSYISNMFEDRQILLTSEIMVCIGILLSFHIISPYTVPQYVCSGLIMFVSAEVLEGVNL 623

Query: 454 XXXXXXXXXXXXRGTYNGGLLSTEAGTLARVVADGTITLAGYLGVNRVLNVTLLPSLFIC 275
                       RGTYNGGLLSTEAGTLARVVADGTITLAGYLG +++LNVTLLPSL IC
Sbjct: 624 SLLSRVMSSRLSRGTYNGGLLSTEAGTLARVVADGTITLAGYLGESKLLNVTLLPSLVIC 683

Query: 274 VASIVATCFTYNTLY 230
           VASIVATCFTYN+LY
Sbjct: 684 VASIVATCFTYNSLY 698


>ref|XP_002511779.1| conserved hypothetical protein [Ricinus communis]
           gi|223548959|gb|EEF50448.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score =  203 bits (517), Expect = 2e-50
 Identities = 106/135 (78%), Positives = 116/135 (85%)
 Frame = -3

Query: 634 VGSYISNMFEDRQILLASEIMVCIGILISFHILGPYSVPQYVCSALITFVSAEVLEGVNX 455
           VG+YISNMFE+RQ+LLASEIMVCIGIL+SF+IL PYSVPQYV SALITFVSAEVLEGVN 
Sbjct: 565 VGNYISNMFEERQVLLASEIMVCIGILLSFNILIPYSVPQYVGSALITFVSAEVLEGVNL 624

Query: 454 XXXXXXXXXXXXRGTYNGGLLSTEAGTLARVVADGTITLAGYLGVNRVLNVTLLPSLFIC 275
                       RGTYNGGLLSTEAGTLARVVADGTITL GYLG +R+LN TLLPSLFIC
Sbjct: 625 SLLSRVMSSRLSRGTYNGGLLSTEAGTLARVVADGTITLTGYLGESRLLNATLLPSLFIC 684

Query: 274 VASIVATCFTYNTLY 230
           ++SIVATC TYN+LY
Sbjct: 685 ISSIVATCCTYNSLY 699


>ref|XP_004144988.1| PREDICTED: LOW QUALITY PROTEIN: SPX domain-containing membrane
           protein At4g22990-like [Cucumis sativus]
          Length = 694

 Score =  202 bits (513), Expect = 5e-50
 Identities = 97/135 (71%), Positives = 118/135 (87%)
 Frame = -3

Query: 634 VGSYISNMFEDRQILLASEIMVCIGILISFHILGPYSVPQYVCSALITFVSAEVLEGVNX 455
           VG+Y+SN+FE+RQ+LLASEIM+CIG+++SFHIL PYSVPQYVCSALITFVSAE+LEGVN 
Sbjct: 560 VGNYLSNLFEERQLLLASEIMLCIGVILSFHILIPYSVPQYVCSALITFVSAEILEGVNL 619

Query: 454 XXXXXXXXXXXXRGTYNGGLLSTEAGTLARVVADGTITLAGYLGVNRVLNVTLLPSLFIC 275
                       RGT+NGGLLSTEAGT+ARV+ADGTITL+GYL  +++LN+TLLPSLFIC
Sbjct: 620 SLLSRVMSSRLSRGTFNGGLLSTEAGTIARVIADGTITLSGYLSESKLLNITLLPSLFIC 679

Query: 274 VASIVATCFTYNTLY 230
           V +I+ATCFTYN+LY
Sbjct: 680 VYAIIATCFTYNSLY 694


>ref|XP_002867738.1| SPX domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313574|gb|EFH43997.1| SPX domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score =  202 bits (513), Expect = 5e-50
 Identities = 102/135 (75%), Positives = 112/135 (82%)
 Frame = -3

Query: 634 VGSYISNMFEDRQILLASEIMVCIGILISFHILGPYSVPQYVCSALITFVSAEVLEGVNX 455
           VGSYISNMFEDRQILL SEIMVC+GIL+SFH++ PY+VPQYVCS LI FVSAEVLEGVN 
Sbjct: 565 VGSYISNMFEDRQILLVSEIMVCVGILLSFHVVVPYTVPQYVCSGLIMFVSAEVLEGVNL 624

Query: 454 XXXXXXXXXXXXRGTYNGGLLSTEAGTLARVVADGTITLAGYLGVNRVLNVTLLPSLFIC 275
                       RGTYNGGLLSTEAGT+ARV+AD TIT+AGY G N +LNVTLLPSL IC
Sbjct: 625 SLLSRVMSSRLSRGTYNGGLLSTEAGTIARVIADATITVAGYFGRNMLLNVTLLPSLVIC 684

Query: 274 VASIVATCFTYNTLY 230
           V SIVATCFTYN+LY
Sbjct: 685 VLSIVATCFTYNSLY 699


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