BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014489
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33123.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   174   9e-42
ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   170   1e-40

>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  182 bits (463), Expect = 2e-44
 Identities = 93/147 (63%), Positives = 102/147 (69%), Gaps = 2/147 (1%)
 Frame = +2

Query: 62  MSFDLHLKPQCGGCGSQKDLYGSNCKHLTLCINCGKKMAENRNKCYDCGVPVTRLIREXX 241
           MSFDL LKP C GCGS  DLYGSNCKH+TLC++CGK MAEN  KCYDCG PVT       
Sbjct: 1   MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVT------- 53

Query: 242 XXXXXXXXXXXXXXXXXXXXXVTRLIREYNVRTNASTEKNYFIGRFVSGLP-FSKKKNAE 418
                                  RLIREYNVRTN+S +KNYFIGRFV+GLP FSKKKNA+
Sbjct: 54  -----------------------RLIREYNVRTNSSGDKNYFIGRFVTGLPGFSKKKNAD 90

Query: 419 -KWCIQKEGLQGRNVTDALREKYKNKP 496
            KW + KEGLQGR V+DALREKYKNKP
Sbjct: 91  NKWSLHKEGLQGRQVSDALREKYKNKP 117


>ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|222867168|gb|EEF04299.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/147 (59%), Positives = 100/147 (68%), Gaps = 2/147 (1%)
 Frame = +2

Query: 62  MSFDLHLKPQCGGCGSQKDLYGSNCKHLTLCINCGKKMAENRNKCYDCGVPVTRLIREXX 241
           MSFDL LKP C GCGS  DLYGSNCKH+TLC+NCGK MAENR KC+DCG  V+       
Sbjct: 1   MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVS------- 53

Query: 242 XXXXXXXXXXXXXXXXXXXXXVTRLIREYNVRTNASTEKNYFIGRFVSGLP-FSKKKNAE 418
                                  RLIREYNVR + S++KNYFIGRFV+GLP FSKKKNAE
Sbjct: 54  -----------------------RLIREYNVRASTSSDKNYFIGRFVTGLPSFSKKKNAE 90

Query: 419 -KWCIQKEGLQGRNVTDALREKYKNKP 496
            KW + KEG+ GR +TDALREK+KNKP
Sbjct: 91  NKWSLHKEGILGRQITDALREKFKNKP 117


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score =  174 bits (440), Expect = 9e-42
 Identities = 88/141 (62%), Positives = 97/141 (68%), Gaps = 2/141 (1%)
 Frame = +2

Query: 80  LKPQCGGCGSQKDLYGSNCKHLTLCINCGKKMAENRNKCYDCGVPVTRLIREXXXXXXXX 259
           LKP C GCGS  DLYGSNCKH+TLC++CGK MAEN  KCYDCG PVTRLI          
Sbjct: 2   LKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLI---------- 51

Query: 260 XXXXXXXXXXXXXXXVTRLIREYNVRTNASTEKNYFIGRFVSGLP-FSKKKNAE-KWCIQ 433
                               REYNVRTN+S +KNYFIGRFV+GLP FSKKKNA+ KW + 
Sbjct: 52  --------------------REYNVRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLH 91

Query: 434 KEGLQGRNVTDALREKYKNKP 496
           KEGLQGR V+DALREKYKNKP
Sbjct: 92  KEGLQGRQVSDALREKYKNKP 112


>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/147 (59%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
 Frame = +2

Query: 62  MSFDLHLKPQCGGCGSQKDLYGSNCKHLTLCINCGKKMAENRNKCYDCGVPVTRLIREXX 241
           MSFDL L+P C GCGS  DLYGSNCKH+TLC+ CGK MAENR KC+DCG  VT       
Sbjct: 1   MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVT------- 53

Query: 242 XXXXXXXXXXXXXXXXXXXXXVTRLIREYNVRTNASTEKNYFIGRFVSGLP-FSKKKNAE 418
                                  RLIREYNVR + S+EKNYFIGRFV+GLP FSKKKNAE
Sbjct: 54  -----------------------RLIREYNVRASTSSEKNYFIGRFVTGLPGFSKKKNAE 90

Query: 419 -KWCIQKEGLQGRNVTDALREKYKNKP 496
            KW + KEG+ GR +TD LREK+KNKP
Sbjct: 91  NKWSLLKEGIHGRQITDTLREKFKNKP 117


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Cucumis sativus]
          Length = 538

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/147 (59%), Positives = 99/147 (67%), Gaps = 2/147 (1%)
 Frame = +2

Query: 62  MSFDLHLKPQCGGCGSQKDLYGSNCKHLTLCINCGKKMAENRNKCYDCGVPVTRLIREXX 241
           MSFDL LK  C GCGS  +LYGSNCKH+TLC+ CGK MAEN+ KCYDCG  VTRLI    
Sbjct: 1   MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLI---- 56

Query: 242 XXXXXXXXXXXXXXXXXXXXXVTRLIREYNVRTNASTEKNYFIGRFVSGLP-FSKKKNAE 418
                                     REYNVR +AS +KNYFIGRF+SGLP FSKK+NAE
Sbjct: 57  --------------------------REYNVRASASNDKNYFIGRFMSGLPNFSKKRNAE 90

Query: 419 -KWCIQKEGLQGRNVTDALREKYKNKP 496
            KW + KEGLQGR ++DALREKYKN+P
Sbjct: 91  NKWSLYKEGLQGRQLSDALREKYKNRP 117