BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014486
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vi...   175   5e-42
ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vi...   171   1e-40
ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002510145.1| F-box protein GID2, putative [Ricinus commun...   164   9e-39

>ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  175 bits (444), Expect = 5e-42
 Identities = 96/184 (52%), Positives = 116/184 (63%), Gaps = 24/184 (13%)
 Frame = -2

Query: 597 MKRPLNAQEHEEVV---LKKRRIIQQEEEKQKLGCEAEFHNLNEDMLFEILKHVDAPTLA 427
           MKRP  A +  E     +K  ++   EE+ +  G    F NL+E++L+E+LKHVDA TLA
Sbjct: 1   MKRPFVADDDLESADQKMKNPKLEDDEEDGEVRGETTGFVNLDENLLYEVLKHVDARTLA 60

Query: 426 KASCVNKKWQRTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLK 247
            A CV+K W RTS DERLWE++CTRHW NIGC  +QVRSVVLA GGFR LHSLYL P+ K
Sbjct: 61  IAGCVSKLWHRTSQDERLWELICTRHWANIGCGNQQVRSVVLALGGFRRLHSLYLWPLSK 120

Query: 246 ---------------ATALS------QYQSSTIPNKWGKDEVHLSLSLLSIRYYEMMDCN 130
                          +TALS             P +WGKDEVHLSLSLLSIRYYE M+ N
Sbjct: 121 PQASSSSSPPSSSWPSTALSPPFAPHSMMRPKFPTRWGKDEVHLSLSLLSIRYYEKMNFN 180

Query: 129 YKGR 118
            +GR
Sbjct: 181 NRGR 184


>ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|222835498|gb|EEE73933.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  174 bits (440), Expect = 2e-41
 Identities = 93/183 (50%), Positives = 121/183 (66%), Gaps = 23/183 (12%)
 Frame = -2

Query: 597 MKRPLNA--QEHEEVVLKKRRIIQQEEEKQKLGCEAE------FHNLNEDMLFEILKHVD 442
           MKRPL+   + H +  +K ++   QEE + K   E+E      F NL+E++LFE+LKHVD
Sbjct: 1   MKRPLDTGPEIHNKTDMKMKKKRHQEEGEIKEEIESETNTGTGFMNLDENLLFEVLKHVD 60

Query: 441 APTLAKASCVNKKWQRTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYL 262
           A TL +ASCV+K+W RT  DERLWE++CT+HW NIGC  +Q+RSVVLA GGFR LHS YL
Sbjct: 61  ARTLGRASCVSKQWHRTVQDERLWELICTKHWANIGCGNQQLRSVVLALGGFRRLHSQYL 120

Query: 261 RPVLKATALSQYQSSTIPN---------------KWGKDEVHLSLSLLSIRYYEMMDCNY 127
            P+ K  +     SS+ P+               +WGKDEVHLSLSLLSIRYYE M+ + 
Sbjct: 121 WPLSKPHSTPAPSSSSSPSAWNPFPKMIGNKPPARWGKDEVHLSLSLLSIRYYEKMNFSN 180

Query: 126 KGR 118
           +GR
Sbjct: 181 RGR 183


>ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  171 bits (432), Expect = 1e-40
 Identities = 86/166 (51%), Positives = 115/166 (69%), Gaps = 22/166 (13%)
 Frame = -2

Query: 552 KKRRIIQQEEEKQKLGCEAEFHNLNEDMLFEILKHVDAPTLAKASCVNKKWQRTSNDERL 373
           ++RR ++  EE  ++  E  F NL+ED+LFE+LKHVDA TLA A+CV+++W+RT++DERL
Sbjct: 18  RQRRQVEGGEEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERL 77

Query: 372 WEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLK-----ATALSQYQSST-- 214
           WEM+CTRHW N+GC  +Q+RSVVLA GGFR LH+L L P+LK     +++ S Y +S+  
Sbjct: 78  WEMICTRHWANVGCGTQQLRSVVLALGGFRRLHALCLWPLLKSPPSSSSSPSPYTTSSHS 137

Query: 213 ---------------IPNKWGKDEVHLSLSLLSIRYYEMMDCNYKG 121
                           P +WGKDEVHLSLSLLSIR+YE M    KG
Sbjct: 138 PQSSPFSPPVVPSKKAPTRWGKDEVHLSLSLLSIRFYEKMSSKSKG 183


>ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|222842886|gb|EEE80433.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  171 bits (432), Expect = 1e-40
 Identities = 92/183 (50%), Positives = 121/183 (66%), Gaps = 23/183 (12%)
 Frame = -2

Query: 597 MKRPLNA----QEHEEVVLKKRRIIQQEEEKQKLGCEAE----FHNLNEDMLFEILKHVD 442
           MKRPL+     Q   ++ +KK+R  Q++E K+++         F NL+E++LFE+LKHVD
Sbjct: 1   MKRPLDTDPGNQNKIDIKMKKKRY-QEDENKEEIESAVNTGSGFMNLDENLLFEVLKHVD 59

Query: 441 APTLAKASCVNKKWQRTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYL 262
           A TL  A+CV+K+W RT  DERLWE+VCT+HW N+GC  +Q+RSVVLA GGFR LHS YL
Sbjct: 60  ARTLGSAACVSKQWHRTVQDERLWELVCTKHWGNMGCGNQQMRSVVLALGGFRRLHSQYL 119

Query: 261 RPVLKATALSQYQSSTI---------------PNKWGKDEVHLSLSLLSIRYYEMMDCNY 127
            P+ K  + S   +ST                P +WGKDEVHLSLSLLSIRYYE M+ + 
Sbjct: 120 WPLSKPQSNSAGSASTSSSAWNPFSPMIGNKPPARWGKDEVHLSLSLLSIRYYEKMNFSN 179

Query: 126 KGR 118
           +GR
Sbjct: 180 RGR 182


>ref|XP_002510145.1| F-box protein GID2, putative [Ricinus communis]
           gi|223550846|gb|EEF52332.1| F-box protein GID2, putative
           [Ricinus communis]
          Length = 179

 Score =  164 bits (416), Expect = 9e-39
 Identities = 90/171 (52%), Positives = 115/171 (67%), Gaps = 17/171 (9%)
 Frame = -2

Query: 597 MKRPLNAQEHE---EVVLKKRRIIQQEEEK--QKLGCEAEFHNLNEDMLFEILKHVDAPT 433
           MKR L  Q      + +  K++I  Q EEK   +      F NL+E++L+E+LKHVDA T
Sbjct: 1   MKRSLETQTENITGQDIKMKKKIKHQGEEKFADEEISGTGFVNLDENLLYEVLKHVDART 60

Query: 432 LAKASCVNKKWQRTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPV 253
           L +A+CV+K+W RT+ DERLWE++CTRHW NIGC  +Q+RSVVLA GGFR LHS YL P+
Sbjct: 61  LGRAACVSKQWHRTAQDERLWELICTRHWANIGCGNQQLRSVVLALGGFRRLHSQYLWPL 120

Query: 252 LK-------ATALSQYQS-----STIPNKWGKDEVHLSLSLLSIRYYEMMD 136
            K       A++ S + S     S  P +WGKDEVHLSLSLLSIRYYE M+
Sbjct: 121 SKPQSSTSAASSSSSWPSFPPIRSKPPARWGKDEVHLSLSLLSIRYYEKMN 171