BLASTX nr result

ID: Coptis21_contig00014477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014477
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514842.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
ref|XP_002322439.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_003631883.1| PREDICTED: uncharacterized protein LOC100854...    74   2e-11
ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp....    72   5e-11
ref|XP_002318251.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>ref|XP_002514842.1| conserved hypothetical protein [Ricinus communis]
           gi|223545893|gb|EEF47396.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 73

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = -2

Query: 506 MMREKSPGLKILWLWTIGTAGVLVASVVTTRLRDMEKLINSQEQQQPTTTNESTIIRDGT 327
           M  EKSPGLKILWLWTIGTAG+LV SVV TRL+DME+L+N+++QQQ  +T   ++I D T
Sbjct: 1   MPGEKSPGLKILWLWTIGTAGILVTSVVRTRLKDMEQLVNTEQQQQQQSTISDSVIVDTT 60

Query: 326 EES*E 312
            E+ E
Sbjct: 61  METQE 65


>ref|XP_002322439.1| predicted protein [Populus trichocarpa] gi|222869435|gb|EEF06566.1|
           predicted protein [Populus trichocarpa]
          Length = 73

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -2

Query: 506 MMREKSPGLKILWLWTIGTAGVLVASVVTTRLRDMEKLINSQEQQQPTTTNESTI 342
           M RE SPGLKILWLWTIGTAG+LV SVV TRL+DME+++N+  QQQ    ++S++
Sbjct: 1   MPRETSPGLKILWLWTIGTAGILVTSVVRTRLKDMEQMMNTDHQQQQQEEHQSSL 55


>ref|XP_003631883.1| PREDICTED: uncharacterized protein LOC100854667 [Vitis vinifera]
           gi|297735259|emb|CBI17621.3| unnamed protein product
           [Vitis vinifera]
          Length = 70

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = -2

Query: 506 MMREKSPGLKILWLWTIGTAGVLVASVVTTRLRDMEKLINSQEQQQPTTTNESTIIRDGT 327
           M RE SPGLKILWLWTIGTAG+LV SV+ TRLRDME+ + ++ Q+Q  T N+S II D  
Sbjct: 1   MPRETSPGLKILWLWTIGTAGILVTSVMRTRLRDMEQQL-TRTQEQEATPNDS-IITDVV 58

Query: 326 EES 318
            ES
Sbjct: 59  PES 61


>ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335422|gb|EFH65839.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
 Frame = -2

Query: 506 MMREKSPGLKILWLWTIGTAGVLVASVVTTRLRDMEKLINSQEQQQP-----TTTNESTI 342
           M REKSPGLKILW+WTIGTA +LV SVV TR++DM+ ++N  ++Q P      +  +S++
Sbjct: 1   MGREKSPGLKILWIWTIGTAAILVTSVVRTRMQDMQSMMNQNQEQAPKENQNVSAGDSSV 60

Query: 341 IRDGT 327
           + D T
Sbjct: 61  LTDET 65


>ref|XP_002318251.1| predicted protein [Populus trichocarpa] gi|222858924|gb|EEE96471.1|
           predicted protein [Populus trichocarpa]
          Length = 75

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = -2

Query: 506 MMREKSPGLKILWLWTIGTAGVLVASVVTTRLRDMEKLINSQEQQQ 369
           M RE SPGLKILW WTIGTA +LV SVV TRL+DME+++N+++QQQ
Sbjct: 1   MTRETSPGLKILWAWTIGTAAILVTSVVRTRLKDMEQMMNAEQQQQ 46


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