BLASTX nr result

ID: Coptis21_contig00014475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014475
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631484.1| PREDICTED: uncharacterized protein LOC100855...   134   1e-29
ref|XP_002279781.2| PREDICTED: uncharacterized protein LOC100257...   115   5e-24
ref|XP_002326486.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|NP_001056746.2| Os06g0139700 [Oryza sativa Japonica Group] g...   109   3e-22
ref|XP_002436440.1| hypothetical protein SORBIDRAFT_10g002670 [S...   108   6e-22

>ref|XP_003631484.1| PREDICTED: uncharacterized protein LOC100855014 [Vitis vinifera]
          Length = 203

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/82 (74%), Positives = 73/82 (89%)
 Frame = +3

Query: 81  DNNNPSNGVQSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSQYLDYSVIDNDE 260
           D++ P NG QS+  ESN+KA+LSAVEMQDQM+QFTH+M QKFLSG+D  YLDYS ID+DE
Sbjct: 121 DHDGPVNGSQSSDMESNQKATLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDYSKIDDDE 180

Query: 261 TLDDHWLREANHDAEEKYFADD 326
           TLDDHWLREAN+DAE+KYFA+D
Sbjct: 181 TLDDHWLREANYDAEDKYFAED 202


>ref|XP_002279781.2| PREDICTED: uncharacterized protein LOC100257446 [Vitis vinifera]
          Length = 309

 Score =  115 bits (288), Expect = 5e-24
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +3

Query: 72  EEPDNNNPSNGVQSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSQYLDYSVID 251
           EE +        + +  ++ +  +LSAVEMQDQM+QFTH+M QKFLSG+D  YLDYS ID
Sbjct: 224 EEEEEEEEEEEKEEDEKQAGKATTLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDYSKID 283

Query: 252 NDETLDDHWLREANHDAEEKYFADD 326
           +DETLDDHWLREAN+DAE+KYFA+D
Sbjct: 284 DDETLDDHWLREANYDAEDKYFAED 308


>ref|XP_002326486.1| predicted protein [Populus trichocarpa] gi|222833808|gb|EEE72285.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  112 bits (281), Expect = 3e-23
 Identities = 57/93 (61%), Positives = 70/93 (75%)
 Frame = +3

Query: 54  NGGRHAEEPDNNNPSNGVQSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSQYL 233
           NGG  + E   +  S   QS+  E +E A+LSA EM D M QFT++M QKFL+G+D Q+L
Sbjct: 213 NGGVSSTEMSED--SKLAQSSKAEHDEAATLSAEEMGDMMGQFTYIMHQKFLAGEDHQHL 270

Query: 234 DYSVIDNDETLDDHWLREANHDAEEKYFADD*E 332
           DYS ID+DETLDDHWLREANHDAE+KYFA+D E
Sbjct: 271 DYSKIDDDETLDDHWLREANHDAEDKYFAEDEE 303


>ref|NP_001056746.2| Os06g0139700 [Oryza sativa Japonica Group]
           gi|55296476|dbj|BAD68672.1| unknown protein [Oryza
           sativa Japonica Group] gi|125553979|gb|EAY99584.1|
           hypothetical protein OsI_21562 [Oryza sativa Indica
           Group] gi|125595989|gb|EAZ35769.1| hypothetical protein
           OsJ_20060 [Oryza sativa Japonica Group]
           gi|215737044|dbj|BAG95973.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215741086|dbj|BAG97581.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215741153|dbj|BAG97648.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255676699|dbj|BAF18660.2| Os06g0139700 [Oryza sativa
           Japonica Group]
          Length = 311

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/94 (57%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = +3

Query: 48  MGNGGRHAEEPDNN-NPSNGVQSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDS 224
           M   GR A+    N + +  V SN T    K +LSA +M+DQ+EQFT +MQQKFLSG+DS
Sbjct: 218 MEEKGRGADNSSENPSVTEVVDSNKTAGASKQTLSAEDMEDQLEQFTSLMQQKFLSGEDS 277

Query: 225 QYLDYSVIDNDETLDDHWLREANHDAEEKYFADD 326
           +++DYS IDNDE LDDHW +EAN+DAEEKYF +D
Sbjct: 278 EHMDYSRIDNDEMLDDHWSKEANYDAEEKYFEED 311


>ref|XP_002436440.1| hypothetical protein SORBIDRAFT_10g002670 [Sorghum bicolor]
           gi|241914663|gb|EER87807.1| hypothetical protein
           SORBIDRAFT_10g002670 [Sorghum bicolor]
          Length = 324

 Score =  108 bits (270), Expect = 6e-22
 Identities = 52/77 (67%), Positives = 64/77 (83%)
 Frame = +3

Query: 96  SNGVQSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSQYLDYSVIDNDETLDDH 275
           +NG  S  T SN+  +LS  EMQDQ+EQFT+VMQQKFLSG+D++++DYS IDNDE LDDH
Sbjct: 250 NNGGDSAATTSNQ--TLSFEEMQDQLEQFTYVMQQKFLSGEDTEHMDYSQIDNDEMLDDH 307

Query: 276 WLREANHDAEEKYFADD 326
           W REAN+DAEEKYF +D
Sbjct: 308 WSREANYDAEEKYFEED 324


Top