BLASTX nr result

ID: Coptis21_contig00014466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014466
         (1956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...   390   e-106
ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil dom...   375   e-101
ref|XP_002533809.1| conserved hypothetical protein [Ricinus comm...   363   1e-97
ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|2...   361   3e-97
ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein ...   352   3e-94

>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4
            [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
            protein product [Vitis vinifera]
          Length = 662

 Score =  390 bits (1001), Expect = e-106
 Identities = 223/462 (48%), Positives = 277/462 (59%), Gaps = 10/462 (2%)
 Frame = -3

Query: 1750 LSPTHRYXXXXXXXXXLNQAQIHQTRPLGSEYQDEERIXXXXXXXXXXSEDPQLWVHESS 1571
            L+PT RY         L QAQIHQTRPLGS  +++ERI           EDPQLWVHE+S
Sbjct: 5    LTPTQRYAAGALLGLALQQAQIHQTRPLGSSIEEDERISSGSSSDSVS-EDPQLWVHENS 63

Query: 1570 GLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDD-ETSSERMDQEHALSN 1394
            GLLRPVF+ L+I+  AW GLEET GSSPAKHH+GAFLR++SE+  E+S++  D E ALS 
Sbjct: 64   GLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAESSADMKDAELALSK 123

Query: 1393 GVDAMAMSMENAISSKESRLAYKPEHLGNXXXXXXXXXXXTVQGSSE--------DDVVS 1238
             VD M +SME   ++ E+ ++ K +H               +Q +SE         ++ +
Sbjct: 124  AVDVMELSME---TTSETSMSKKEKHREYENKCREKCSPADMQPNSEVVDVPLQAQELKN 180

Query: 1237 CSK-ELSEAADGPAGILFEEPVEEIMLLNHHRKVAVLYELLSGCLANIPEDKKKHSRLRK 1061
            C++  + +   G +    E+PVEE+ +LN+ RKV VLYELLS CL + PED KK +R RK
Sbjct: 181  CNELSIEQTPYGSSSKFDEKPVEEVAMLNYPRKVTVLYELLSACLTDTPEDNKKSTRKRK 240

Query: 1060 GYDARHRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXXXXAKWSKWK 881
            GYDARHRVALRLLATWLD++W  +EAME+MVA SAMAL               ++W+KWK
Sbjct: 241  GYDARHRVALRLLATWLDIQWKKVEAMEIMVACSAMALSKEQASKEEETQSPKSQWTKWK 300

Query: 880  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTLGTLVPVIXXXXXXXXXXXXXXX 701
            R                                 APTLGT++PVI               
Sbjct: 301  RGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTV 360

Query: 700  XXXXXXXXXXXXXXXGLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVLVSGLAFEEQ 521
                           GLTGSKMARRTG VDEFEFK +GENHNQGRLAV +LVSG  F+E+
Sbjct: 361  AGSVAIAASFGAAGAGLTGSKMARRTGSVDEFEFKAIGENHNQGRLAVEILVSGFVFQEE 420

Query: 520  DFIRPWEGQKDNLERYALQWESKNLIAVSTAIQGLITQAFFL 395
            DFI PWEGQ +NLERYALQWESKNLIAVSTAIQ  +T +  L
Sbjct: 421  DFISPWEGQNNNLERYALQWESKNLIAVSTAIQDWLTSSIAL 462


>ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
            4-like [Cucumis sativus]
          Length = 673

 Score =  375 bits (963), Expect = e-101
 Identities = 218/452 (48%), Positives = 263/452 (58%), Gaps = 5/452 (1%)
 Frame = -3

Query: 1750 LSPTHRYXXXXXXXXXLNQAQIHQTRPLGSEYQD---EERIXXXXXXXXXXS-EDPQLWV 1583
            L+PT RY         L+QAQIHQTRPLG    D   EER             EDP+LWV
Sbjct: 20   LAPTQRYATGALFALALHQAQIHQTRPLGFSDDDARAEERTSSCSGSSSDSVSEDPELWV 79

Query: 1582 HESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDDETSSERMDQEHA 1403
            HESS LLRPVFR+LEID  AW GLEET GS  AKHHIGAFLR+LSED+E SSE ++QE A
Sbjct: 80   HESSALLRPVFRFLEIDSAAWSGLEETAGSGTAKHHIGAFLRLLSEDNENSSEMIEQELA 139

Query: 1402 LSNGVDAMAMSMENAISSKESRLAYKP-EHLGNXXXXXXXXXXXTVQGSSEDDVVSCSKE 1226
            LS  VDA+  +ME  I S +S+  Y+  E                 + + + +    S  
Sbjct: 140  LSKSVDAIEENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFNKQTESTDGSVV 199

Query: 1225 LSEAADGPAGILFEEPVEEIMLLNHHRKVAVLYELLSGCLANIPEDKKKHSRLRKGYDAR 1046
            + +  DG      E+P+EE  +L+H RKV +LYELLS CLA+I  +KK+ SR RKGYDAR
Sbjct: 200  VKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSACLADISVNKKQ-SRQRKGYDAR 258

Query: 1045 HRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXXXXAKWSKWKRXXXX 866
            HR+ALRLL+TW+D+KW+ MEA+E MVA SAMAL               + W KWKR    
Sbjct: 259  HRLALRLLSTWIDIKWMKMEAIETMVACSAMALAKSVAEMGEESPTKESNWDKWKRGGII 318

Query: 865  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTLGTLVPVIXXXXXXXXXXXXXXXXXXXX 686
                                         APTLGT++PVI                    
Sbjct: 319  GAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVAGSVA 378

Query: 685  XXXXXXXXXXGLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVLVSGLAFEEQDFIRP 506
                      GLTG+KMARR G VDEFEFK +GENHNQGRLAV + VSG AF+++DF+RP
Sbjct: 379  VAASFGAAGAGLTGTKMARRIGSVDEFEFKAIGENHNQGRLAVEITVSGFAFDDKDFVRP 438

Query: 505  WEGQKDNLERYALQWESKNLIAVSTAIQGLIT 410
            WEG  DNLERYALQWESKN+IAVSTAIQ  +T
Sbjct: 439  WEGLTDNLERYALQWESKNIIAVSTAIQDWLT 470


>ref|XP_002533809.1| conserved hypothetical protein [Ricinus communis]
            gi|223526263|gb|EEF28578.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 713

 Score =  363 bits (931), Expect = 1e-97
 Identities = 228/494 (46%), Positives = 272/494 (55%), Gaps = 42/494 (8%)
 Frame = -3

Query: 1750 LSPTHRYXXXXXXXXXLNQAQIHQTRPLG---------SEYQDEERIXXXXXXXXXXSED 1598
            LSPT RY         L+QAQ HQTRPLG          + Q +             SED
Sbjct: 25   LSPTQRYAAGALFAIALHQAQTHQTRPLGFSPDVDPTEPQQQGDRTSCSSSNSSDSVSED 84

Query: 1597 PQLWVHESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSE---DDETSS 1427
            P LWVHE+ GLLRPVFR+LEID  AW GLEET GSSPAK+H+GAFLR+L+E   DD  SS
Sbjct: 85   PDLWVHETLGLLRPVFRFLEIDSNAWHGLEETAGSSPAKYHVGAFLRLLAENNDDDNASS 144

Query: 1426 ERM--DQEHALSNGVDAMAMSMENAISSKESRLAYKPEHLGNXXXXXXXXXXXTVQGSSE 1253
             +   DQE ALS  VD M+ +ME A  S +S+   K +H               VQ  +E
Sbjct: 145  SQSSSDQELALSKAVDVMSQNMETATVSFQSK---KEKHKEYEYECREKLSNNEVQSDNE 201

Query: 1252 ------------------------DDVVSCSKELSEAADGP-AGI--LFEEPVEEIMLLN 1154
                                     DV   S E  +  DG   G+  + E+P+EE  +L+
Sbjct: 202  AAKELLETAQESREKLSSAQVELNSDVAKESVETLKERDGVLVGVSGVDEKPIEEEKMLS 261

Query: 1153 HHRKVAVLYELLSGCLANIPEDK-KKHSRLRKGYDARHRVALRLLATWLDVKWINMEAME 977
            + RK+AVLYE+LSGCLA+  ED  KK++R RKGYDARHRVALRLLATWLD+KWI MEA+E
Sbjct: 262  YPRKIAVLYEILSGCLADKREDNNKKYTRRRKGYDARHRVALRLLATWLDIKWIQMEAIE 321

Query: 976  VMVAFSAMALMXXXXXXXXXXXXXXAKWSKWKRXXXXXXXXXXXXXXXXXXXXXXXXXXX 797
             ++A SAMA+               +KW+KWKR                           
Sbjct: 322  TIIACSAMAVAKEEESKEEASHSTKSKWAKWKRGGIIGAAAITGGTLLAITGGLAAPAIA 381

Query: 796  XXXXXXAPTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTGSKMARRTGG 617
                  APTLGTL+PVI                              GL G+KMARRTG 
Sbjct: 382  AGFGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLAGTKMARRTGN 441

Query: 616  VDEFEFKPVGENHNQGRLAVGVLVSGLAFEEQDFIRPWEGQKDNLERYALQWESKNLIAV 437
            VDEFEFK +GENHNQGRLAV +LVSG  F+E+DFIRPWEGQ DNLERY LQWESKNLIAV
Sbjct: 442  VDEFEFKAIGENHNQGRLAVEILVSGFVFDEEDFIRPWEGQIDNLERYVLQWESKNLIAV 501

Query: 436  STAIQGLITQAFFL 395
            STAIQ  +T +  L
Sbjct: 502  STAIQDWLTSSIAL 515


>ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|222853743|gb|EEE91290.1|
            predicted protein [Populus trichocarpa]
          Length = 681

 Score =  361 bits (927), Expect = 3e-97
 Identities = 219/467 (46%), Positives = 265/467 (56%), Gaps = 20/467 (4%)
 Frame = -3

Query: 1750 LSPTHRYXXXXXXXXXLNQAQIHQTRPLGSEYQDEER--------IXXXXXXXXXXSEDP 1595
            LS T RY         L+QAQIHQTRPLG  + D E+                   SEDP
Sbjct: 13   LSRTQRYAAGALFAIALHQAQIHQTRPLGLFHDDSEQEERTSCSSSHSNGSSSDSVSEDP 72

Query: 1594 QLWVHESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDD----ETSS 1427
             LW+HE+SGLLRPVFR+LE++ +AW GLEET G SPAKHH+GAFLR+LSE+      +SS
Sbjct: 73   DLWIHENSGLLRPVFRFLEVESVAWTGLEETAGGSPAKHHVGAFLRLLSEESGDASSSSS 132

Query: 1426 ERMDQEHALSNGVDAMAMSM-ENAISS---KESRLAYKPEHLGNXXXXXXXXXXXTVQGS 1259
            +  DQE ALS  VD M  +M  N +SS   KE    Y+ +                V+  
Sbjct: 133  QSSDQEFALSKAVDVMEETMGANPVSSQSKKEKHKEYETQCREKLSAGSEVKSTSEVEND 192

Query: 1258 S----EDDVVSCSKELSEAADGPAGILFEEPVEEIMLLNHHRKVAVLYELLSGCLANIPE 1091
            S    +DD    S ++S+A       + EEPVEE  +L++ RKV VLYE+LS CLA+  E
Sbjct: 193  SPKTAKDDH---SADVSDAPRDSGHNVDEEPVEEEKMLSNQRKVTVLYEILSACLADRRE 249

Query: 1090 DKKKHSRLRKGYDARHRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXX 911
            + KK +R R GYDARHRVALRLLATWLD+KW  MEA+E+MVA SAMA+            
Sbjct: 250  ENKKCTRKRNGYDARHRVALRLLATWLDIKWTKMEAIELMVACSAMAVAKEEASKEETKS 309

Query: 910  XXXAKWSKWKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTLGTLVPVIXXXXX 731
                KW+KWKR                                 APTLGT++PVI     
Sbjct: 310  PKS-KWAKWKRGGIIGAAAITGGTLLAITGGLAAPAIAAGFGALAPTLGTIIPVIGASGF 368

Query: 730  XXXXXXXXXXXXXXXXXXXXXXXXXGLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGV 551
                                     GL G+KMARRTG VDEFEFK VG+NHNQGRLAVG+
Sbjct: 369  AAAASAAGTVAGSVAVAASFGAAGAGLAGTKMARRTGSVDEFEFKAVGDNHNQGRLAVGI 428

Query: 550  LVSGLAFEEQDFIRPWEGQKDNLERYALQWESKNLIAVSTAIQGLIT 410
            +VSG  F+E+DFI+PWEGQ DNLERYAL WE KNLIAVSTAIQ  +T
Sbjct: 429  MVSGCVFDEEDFIKPWEGQNDNLERYALHWEPKNLIAVSTAIQDWLT 475


>ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
            max]
          Length = 676

 Score =  352 bits (902), Expect = 3e-94
 Identities = 217/465 (46%), Positives = 259/465 (55%), Gaps = 18/465 (3%)
 Frame = -3

Query: 1750 LSPTHRYXXXXXXXXXLNQAQIHQTRPL------GSEYQDEERIXXXXXXXXXXSEDPQL 1589
            LSPT RY         L++A ++QT PL       S  +++             SEDP L
Sbjct: 15   LSPTQRYAAGALFGLALHEAHLNQTNPLPLPASEDSLSEEQRTSSSSGSSSDSVSEDPDL 74

Query: 1588 WVHESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSED-DETSSERMDQ 1412
            WVH +SGLLRPVF++L+ID  AW GLEET GSS A HH+G FLR+LS++ D+ SS+R+DQ
Sbjct: 75   WVHSNSGLLRPVFKFLDIDSAAWSGLEETAGSSSATHHVGPFLRLLSQELDDGSSQRLDQ 134

Query: 1411 EHALSNGVDAMAMSMENAISSKESRLAYKPEHLGNXXXXXXXXXXXTVQGSSE--DDVVS 1238
            E ALS+ VD +A+ M     S ES+     E+               VQ   E  D  + 
Sbjct: 135  ERALSSAVDGIALDMRRNSESSESKREKLREY---EHQCREKFSIDDVQPHCEKVDAHLE 191

Query: 1237 CSKELS--------EAADGPAGILFEE-PVEEIMLLNHHRKVAVLYELLSGCLANIPEDK 1085
              KE+         E   G      +E P+EE+ +L+  RKV VLYELLSGCL+N+ ED 
Sbjct: 192  VQKEMDAAPLLDCKETQQGSVDWKIDERPIEEVRMLSDQRKVTVLYELLSGCLSNLGEDV 251

Query: 1084 KKHSRLRKGYDARHRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXXX 905
                R RKGYDARHRVALRLLATWLDVKW  MEA+E MVA SAMAL+             
Sbjct: 252  ---GRRRKGYDARHRVALRLLATWLDVKWTKMEAIETMVACSAMALIKEKESKNEETQSK 308

Query: 904  XAKWSKWKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTLGTLVPVIXXXXXXX 725
             +KW+K KR                                 APTLGTL+PVI       
Sbjct: 309  ESKWAKLKRGGIIGAAALTGGTLLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAA 368

Query: 724  XXXXXXXXXXXXXXXXXXXXXXXGLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVLV 545
                                   GLTGSKMARR GGVDEFEFK +GENHNQGRL V +LV
Sbjct: 369  AASAAGTVAGSVAVAASFGAAGAGLTGSKMARRVGGVDEFEFKAIGENHNQGRLGVEILV 428

Query: 544  SGLAFEEQDFIRPWEGQKDNLERYALQWESKNLIAVSTAIQGLIT 410
            SG  FE++DFIRPWEGQ DNLERYALQWESKNLIAVSTAIQ  +T
Sbjct: 429  SGFVFEKEDFIRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLT 473


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