BLASTX nr result
ID: Coptis21_contig00014451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014451
(1787 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2... 241 5e-61
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin... 193 1e-46
ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231... 147 7e-33
ref|XP_004134949.1| PREDICTED: zinc finger CCCH domain-containin... 147 7e-33
ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [... 139 2e-30
>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
predicted protein [Populus trichocarpa]
Length = 669
Score = 241 bits (615), Expect = 5e-61
Identities = 192/564 (34%), Positives = 259/564 (45%), Gaps = 47/564 (8%)
Frame = -2
Query: 1786 RPRSLSPPTESEDGTKRPAIICDFFARGWCIKGSSCKFLHRKDGMDNSSMFSNQDVPTKS 1607
R RSLSP TE DG KR A+ICDFFA+GWCI+GSSC+FLH + DN+ D +
Sbjct: 152 RARSLSPSTELRDGNKRAAVICDFFAKGWCIRGSSCRFLHTTNKADNTGQQLGVD-EVAT 210
Query: 1606 SNDNFKDSGLRVENEKSSVQKSKPLASSESQRSRQSVDKHDKHCSLVPDDLKSDNPGSGW 1427
D F + + P+A+S + + S H L P
Sbjct: 211 REDQFDEGVRNILETPKFPHFPDPVAASTGKEATFS--SHFSSERLPP-----------L 257
Query: 1426 QHLGSASGFQCKSNNSEEYNRSLGIPLLNEIRNHHSHFMDDKRLNGEEYVRGYSSSMTNL 1247
+H + Q + + +GIPL + K+ + + G+SSS ++
Sbjct: 258 EHKENERLHQLDDKHKLSLRQRVGIPL------------NAKQFSSSKDDPGFSSSFKDV 305
Query: 1246 LPEHRFLSSGSPIPSSVYRNSSSSLAYEKSIGEPPNLILESQSMKYGAXXXXXXXXXXXX 1067
E+ +R + Y G +LI S + +
Sbjct: 306 GIEN-------------FRQQWPATDY----GSYTSLINRGSSFSFSSSFDTSLLGSQKL 348
Query: 1066 XXXXXXXXXXSMLGHSPSTFYSRPEQEILSLHRSTG-------HHFRSTISNWEPSVPFR 908
S+L ++ +S E E LSL G H + + ++WEPSVPFR
Sbjct: 349 LDSDRASRSSSLL--QSASAFSGSEPESLSLASVPGDQLRHAEHKTKISSNDWEPSVPFR 406
Query: 907 PXXXXXXXXXXSK-NQYDPLLDSIDPPNGGERTFWGSSVSQSATTHNTSNQQANGDP--- 740
P S ++YDPL DS PN G+++F S S A+ NTS Q GD
Sbjct: 407 PSFFITPEMISSAGSKYDPLRDSFVLPNVGDKSFKFSFFSLGASISNTSQQPIYGDSLSN 466
Query: 739 -------------ISFHQKPQYGLSENSVSSHGVDGFTTPADVTATFGAQQQNNRSLSKE 599
IS H KP LS+ + S+ G D FTT A VT G N S KE
Sbjct: 467 RNFGTEFNGDKSTISSHDKPHGSLSDKNCSTPGKDSFTT-ATVTGGAGTADGENGSALKE 525
Query: 598 ENRL-----KSGRFLN------------STNAKDVDLDNKHSH------QGDGGNHTKES 488
E+ K R N S + KD+ D+ + Q GG+ KES
Sbjct: 526 ESASGIGYDKVNRVTNKIDRDARPQTDGSRHKKDLKADSVRQNNDMEVDQKIGGDTQKES 585
Query: 487 KAPKLFRASLIEFVKEIVKPYWREGHLSKDAHNTIVKKAVEKVLHSLQPQQIPNTTESTT 308
K + FR++LI+FVK+++KP WREGHLSKDAHNTIVKK VEKVL +LQP QIP T ES
Sbjct: 586 KVLRHFRSALIDFVKDLLKPTWREGHLSKDAHNTIVKKTVEKVLSTLQPHQIPATVESIK 645
Query: 307 EYLSASQPKLAKLVEGYVGRYAKS 236
+YLS+SQPK+AKLVEGY+ +Y KS
Sbjct: 646 QYLSSSQPKMAKLVEGYISKYGKS 669
>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Glycine max]
Length = 713
Score = 193 bits (491), Expect = 1e-46
Identities = 161/559 (28%), Positives = 237/559 (42%), Gaps = 43/559 (7%)
Frame = -2
Query: 1786 RPRSLSPPTESEDGTKRPAIICDFFARGWCIKGSSCKFLHRKDGMDNSSMFSNQD-VPTK 1610
R R+LSP E +DG KRP IICDFFA+GWCI+GSSC FLH KD DN+ + D V T
Sbjct: 208 RTRNLSPSAEIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGDNTDQEAEADSVSTY 267
Query: 1609 SSNDNFKDSGLRVENEKSSVQKSKPLASSESQRSRQSVDKHDKHCSLVPDDLKSDNPGSG 1430
+ G+R E+S + + + S + +Q D +L PD+ +
Sbjct: 268 QKRQLKVEEGVRENVERSRMNEQEATPSWHPSQEKQKFPPRD---NLFPDNRFPFSASDN 324
Query: 1429 WQHLGSASGFQCKSNNSEEYNRSLGIPLLNEIRNHHSHFMDDKRLNGEEYVRGYSSSMTN 1250
+ + C + RN H + +GY+S++ +
Sbjct: 325 YLSPNLSLNSTCADGMATP-------------RNQHMY-------------KGYTSTLLS 358
Query: 1249 LLPEH----RFLSSGSPIPSSVYRNSSSSLAYEKSIGEPPNLILESQSMKYGAXXXXXXX 1082
P +F +S + + S SL + S+G S+K+
Sbjct: 359 HSPNSSLVTQFAASSMSLSHRILAQSGRSLPFSSSLGAS-----NVDSLKF--------- 404
Query: 1081 XXXXXXXXXXXXXXXSMLGHSPSTFYSRPEQEILSLHR----STGHHFRSTISNWEPSVP 914
+ S + R + ++S R G+ + +WEPSVP
Sbjct: 405 ---------LNTDKEYLTSKSTFSGSGREDFSLVSSSRVPSYPAGYKSKICSYDWEPSVP 455
Query: 913 FRPXXXXXXXXXXSKNQ-YDPLLDSIDPPNGGERTFWGSSVSQSATTHNTSNQQANGDP- 740
FRP S YDPL DSI+ PN G+ + S + + +S + GD
Sbjct: 456 FRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNVQVSSQVRTYGDSA 515
Query: 739 ---------------ISFHQKPQYGLSENSVSSHGVDGFTTPADVTA------------T 641
+S H K + H D ++T+ T
Sbjct: 516 VVGEHMSNLNDDKSSVSSHNKFCENEPNKNCLPHEKDCLPPETEITSGTYQGKMGMGQHT 575
Query: 640 FGAQQQNNRSLSKEENRLKSGRFLNSTNAKDVDLDNKHSHQGD-----GGNHTKESKAPK 476
FG E + + K VD D K+ H+ D G+ KESKA K
Sbjct: 576 FGVADSTKNERDVTECDARRHGEGSGHKKKRVDRDKKN-HEMDVDFQIDGSIQKESKALK 634
Query: 475 LFRASLIEFVKEIVKPYWREGHLSKDAHNTIVKKAVEKVLHSLQPQQIPNTTESTTEYLS 296
FRA+L++ VKE++KP W EGHLSKDAH IVKK+V+KV+ +L+P QIP ++ +Y+S
Sbjct: 635 FFRAALVDHVKELLKPAWHEGHLSKDAHIMIVKKSVDKVVSTLEPHQIP-IMDTAKQYVS 693
Query: 295 ASQPKLAKLVEGYVGRYAK 239
+SQ K+AKLV GYV +Y K
Sbjct: 694 SSQVKIAKLVNGYVNKYGK 712
>ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231580 [Cucumis sativus]
Length = 738
Score = 147 bits (372), Expect = 7e-33
Identities = 99/283 (34%), Positives = 146/283 (51%), Gaps = 42/283 (14%)
Frame = -2
Query: 958 HHFRSTISNWEPSVPFRPXXXXXXXXXXSKNQYDPLLDSIDPPN--GGERTFWGSSVSQS 785
+ + + +WEPSVPFRP + +QYDP LDS++ P G
Sbjct: 461 YKMKCSSDDWEPSVPFRP--SFFIPSITTASQYDPFLDSMEVPRIVGCSYNVTLDRQGHE 518
Query: 784 ATTHNTSNQQANGD-PISFHQKPQYGLSENSVSSH--------------GVDGFTTPADV 650
+ ++ Q+A+G+ + KP++ +S+SSH G D ++
Sbjct: 519 EASPLSTLQRASGNFVVPGSSKPEFNDDTSSLSSHNKAADKNGKVGHLQGKDPLLLEPEI 578
Query: 649 TATFG-------AQQQNNRSLSKEENRLKSGRF---------LNSTNAKDV--------- 545
+FG ++ +++ L+ E++ K + S + KD
Sbjct: 579 RGSFGLDGRFSRTREDDHKGLTCEKDVTKKKKMGIGGELKLPNISLHEKDSEADSDRQLG 638
Query: 544 DLDNKHSHQGDGGNHTKESKAPKLFRASLIEFVKEIVKPYWREGHLSKDAHNTIVKKAVE 365
D+D KH + GN KESKA + FR++LIE VKEI+KP WREGHL KD HNT+VKK +
Sbjct: 639 DMDGKHLME---GNAPKESKATRHFRSALIELVKEILKPKWREGHLKKDVHNTVVKKTFD 695
Query: 364 KVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVEGYVGRYAKS 236
KVL +LQ Q+P T ES +YLS+S+PK+ KLVEGYV +Y KS
Sbjct: 696 KVLGALQSHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKYGKS 738
Score = 58.5 bits (140), Expect = 5e-06
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -2
Query: 1786 RPRSLSPPTESEDGTKRPAI-ICDFFARGWCIKGSSCKFLHRKDGMDNSSMFSNQ 1625
R RSL+P + K PA ICDF+A+GWCIKGSSC FLH K+ S S +
Sbjct: 170 RSRSLTPVADVNGEEKHPAAAICDFYAKGWCIKGSSCSFLHIKNNAYGSDQHSEE 224
>ref|XP_004134949.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Cucumis sativus]
Length = 458
Score = 147 bits (372), Expect = 7e-33
Identities = 99/283 (34%), Positives = 146/283 (51%), Gaps = 42/283 (14%)
Frame = -2
Query: 958 HHFRSTISNWEPSVPFRPXXXXXXXXXXSKNQYDPLLDSIDPPN--GGERTFWGSSVSQS 785
+ + + +WEPSVPFRP + +QYDP LDS++ P G
Sbjct: 181 YKMKCSSDDWEPSVPFRP--SFFIPSITTASQYDPFLDSMEVPRIVGCSYNVTLDRQGHE 238
Query: 784 ATTHNTSNQQANGD-PISFHQKPQYGLSENSVSSH--------------GVDGFTTPADV 650
+ ++ Q+A+G+ + KP++ +S+SSH G D ++
Sbjct: 239 EASPLSTLQRASGNFVVPGSSKPEFNDDTSSLSSHNKAADKNGKVGHLQGKDPLLLEPEI 298
Query: 649 TATFG-------AQQQNNRSLSKEENRLKSGRF---------LNSTNAKDV--------- 545
+FG ++ +++ L+ E++ K + S + KD
Sbjct: 299 RGSFGLDGRFSRTREDDHKGLTCEKDVTKKKKMGIGGELKLPNISLHEKDSEADSDRQLG 358
Query: 544 DLDNKHSHQGDGGNHTKESKAPKLFRASLIEFVKEIVKPYWREGHLSKDAHNTIVKKAVE 365
D+D KH + GN KESKA + FR++LIE VKEI+KP WREGHL KD HNT+VKK +
Sbjct: 359 DMDGKHLME---GNAPKESKATRHFRSALIELVKEILKPKWREGHLKKDVHNTVVKKTFD 415
Query: 364 KVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVEGYVGRYAKS 236
KVL +LQ Q+P T ES +YLS+S+PK+ KLVEGYV +Y KS
Sbjct: 416 KVLGALQSHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKYGKS 458
>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355482671|gb|AES63874.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 892
Score = 139 bits (350), Expect = 2e-30
Identities = 104/303 (34%), Positives = 146/303 (48%), Gaps = 40/303 (13%)
Frame = -2
Query: 1024 HSPSTFYSRPEQEILSLHRSTGH---HFRSTISNWEPSVPFRPXXXXXXXXXXS-KNQYD 857
H S R + ++ R H + T SNWEPSVPFRP S ++ YD
Sbjct: 590 HKSSFSSDREDFHLVGSSRVAPHANGYTLKTRSNWEPSVPFRPSFFITSMNVSSPRDLYD 649
Query: 856 PLLDSIDPPNGGERTFW------GSSVSQSATTHNTSNQQANG----------DPISFHQ 725
PL +SI+ PN G+ + GSSV S+ + A G +S H
Sbjct: 650 PLRNSIEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVSSHH 709
Query: 724 KPQYGLSENSVSSHGVDGFTTPADVTATFGAQQQNN---------------RSLSKEENR 590
K S G D T A++T+ A QN +L K
Sbjct: 710 KFYENEPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGVEDRIETLKKRTEH 769
Query: 589 LKSGRFLNSTNAKD-VDLDNK-HSHQGD---GGNHTKESKAPKLFRASLIEFVKEIVKPY 425
S + K+ V DNK H + D G+ KE+K K+F A L++ VKE++KP+
Sbjct: 770 DARHHSDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELLKPF 829
Query: 424 WREGHLSKDAHNTIVKKAVEKVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVEGYVGRY 245
W EG LSKDAH IVKK+V+KV+ +L+P+QIP T ++ +Y+S +PK+AKLV GYV ++
Sbjct: 830 WHEGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRPKIAKLVHGYVNKH 889
Query: 244 AKS 236
KS
Sbjct: 890 GKS 892
Score = 80.9 bits (198), Expect = 1e-12
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 1786 RPRSLSPPTESEDGTKRPAIICDFFARGWCIKGSSCKFLHRKDGMDNSSMFSNQDVPTKS 1607
R R SP E +DG KRPAIIC FFA+GWCI+GSSC FLH KD ++N+ + DV T
Sbjct: 433 RTRIHSPSAEIKDGNKRPAIICAFFAKGWCIRGSSCSFLHVKDSVNNTDQGAEGDVVTAH 492
Query: 1606 SNDNFK-DSGLRVENEKSSVQKSKPLASSESQRSRQSVDKHDKHCSLVPDDLKSDNPGS 1433
K + G++ ENE+ + P E R S+ +K ++ S N S
Sbjct: 493 QKRELKLEKGVK-ENEEEASPSWHPSHEKEKFLMRDSLFPENKSAFNTSNNYFSSNLSS 550