BLASTX nr result

ID: Coptis21_contig00014450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014450
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515600.1| hypothetical protein RCOM_0927570 [Ricinus c...   219   1e-54
ref|XP_002282416.2| PREDICTED: protein TIFY 8-like [Vitis vinife...   217   3e-54
ref|XP_002308637.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51
ref|XP_002324269.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48
ref|XP_003522639.1| PREDICTED: protein TIFY 8-like [Glycine max]      194   4e-47

>ref|XP_002515600.1| hypothetical protein RCOM_0927570 [Ricinus communis]
            gi|223545544|gb|EEF47049.1| hypothetical protein
            RCOM_0927570 [Ricinus communis]
          Length = 446

 Score =  219 bits (557), Expect = 1e-54
 Identities = 139/286 (48%), Positives = 173/286 (60%), Gaps = 11/286 (3%)
 Frame = -3

Query: 1033 ERPRRA--DELSFGMQPPKPTSSSHLILKHTVGSRPDSAASKWERSLMNVGSSTQNTSCL 860
            +R RR+  DE  +GMQ  +PTS+S LIL+ + G R D+  SKWER +  VG++ Q     
Sbjct: 173  DRHRRSNDDEAFYGMQAMRPTSAS-LILQSSTGGRLDANVSKWERPIP-VGTAIQYPPRA 230

Query: 859  GQFGTYVDNVKA--------GPSVISPPAADEGSRTGVKGSGMLRAINATSGVEPK-TPG 707
            GQF  +V  V A        G S+IS  AADEGSRTG+KG G+L ++N  SG+  K + G
Sbjct: 231  GQFVPFVHQVSANKFREMNAGTSIISQSAADEGSRTGIKGPGILSSLNTGSGISEKNSSG 290

Query: 706  VLLSSHRLKSGTQNADPELSNSPRREGLNSASRQMTIFYAGQAHVFDEVHPNKADVIMAL 527
             L S  +LKSGT  +DPE S    R+GL SASRQMTIFY GQAHVFD+VHPNKADVIMAL
Sbjct: 291  ALPSGSKLKSGTHVSDPESSTPSSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMAL 350

Query: 526  AGSNGGSWSTTYSPKSSVGHLFNETGISNRENRPGFSDLAYHPELRRNLSVPGSSTRGFN 347
            AGSNGGSWSTTYSPK ++     E  +++ EN  G  D A   E R  LS   ++T+G  
Sbjct: 351  AGSNGGSWSTTYSPKPTM-RPGGEIHMTSGENEAG--DAACQREFRARLSGITNTTQGVG 407

Query: 346  QGSRLSTTVGDPVNSFSGAHQGSMNLRRIRSFNQQAEQKNEGKREV 209
             G R+S   G       G H   M   + R+  Q  E   E KREV
Sbjct: 408  SGDRVSMPTG-------GHHGSIMIADKTRNPGQAGEASTEDKREV 446


>ref|XP_002282416.2| PREDICTED: protein TIFY 8-like [Vitis vinifera]
            gi|296081988|emb|CBI20993.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  217 bits (553), Expect = 3e-54
 Identities = 140/291 (48%), Positives = 177/291 (60%), Gaps = 18/291 (6%)
 Frame = -3

Query: 1033 ERPRRA--DELSFGMQPPKPTSSSHLILKHTVGSRPDSAASKWERSL-MNVGSSTQNTSC 863
            +RPRR+  +EL  G+Q  +PTS+S LIL+   GSR D   SKW+RS+ MNV  + Q    
Sbjct: 159  DRPRRSSDEELFLGLQSLRPTSAS-LILQPPTGSRTDVNLSKWDRSVTMNVNPTVQYPLR 217

Query: 862  LGQFGTYVDNV-----------KAGPSVISPPAADEGSRTGVKGSGMLRAI--NATSGVE 722
             GQF  ++  V            AGPS +S PAADEGSRTG+KGSG+L +I  NA+  V 
Sbjct: 218  AGQFAPFLHQVPPNRFKDANSGNAGPSNLSQPAADEGSRTGIKGSGILSSITANASGSVS 277

Query: 721  PKTP-GVLLSSHRLKSGTQNADPELSNSPRREGLNSASRQMTIFYAGQAHVFDEVHPNKA 545
             + P G+L S +R KS T   +PE S +P R G  S+SRQMTIFY GQAHVFD+VHPNKA
Sbjct: 278  ERNPSGLLPSGNRPKSRTHILEPESSTAPSRLGSTSSSRQMTIFYGGQAHVFDDVHPNKA 337

Query: 544  DVIMALAGSNGGSWSTTYSPKSSVGHLFNETGISNRENRPGFSDLAYHP-ELRRNLSVPG 368
            DVIMALAGSNGGSWSTTYSPKS+V  +   T   N EN  G +  +  P E R  LS+ G
Sbjct: 338  DVIMALAGSNGGSWSTTYSPKSTVKPVGEST--PNGENETGMAGNSMFPREFRGRLSLTG 395

Query: 367  SSTRGFNQGSRLSTTVGDPVNSFSGAHQGSMNLRRIRSFNQQAEQKNEGKR 215
            + ++G+  G R+ T  G P        QG    +  R+  + AE   E KR
Sbjct: 396  NPSQGYGSGDRILTLTGAP--------QGVNIPKDTRNPVKAAEPSTEEKR 438


>ref|XP_002308637.1| predicted protein [Populus trichocarpa] gi|222854613|gb|EEE92160.1|
            predicted protein [Populus trichocarpa]
          Length = 430

 Score =  208 bits (529), Expect = 2e-51
 Identities = 133/285 (46%), Positives = 170/285 (59%), Gaps = 13/285 (4%)
 Frame = -3

Query: 1033 ERPRRA--DELSFGMQPPKPTSSSHLILKHTVGSRPDSAASKWERSL-MNVGSSTQNTSC 863
            ERPRR+  DE+ +GMQP +P+S+S LIL+ + GSR D+  SK +RS+ M +G+       
Sbjct: 169  ERPRRSNDDEVFYGMQPMRPSSAS-LILQPSAGSRLDANVSKQDRSIPMGIGAYPPRG-- 225

Query: 862  LGQFGTYVDNV--------KAGPSVISPPAADEGSRTGVKGSGMLRAINATSGVEPKTPG 707
             GQF  +   V         AGPS++S  AADEGSRTG+KG G+L +INA SG+  K   
Sbjct: 226  -GQFVPFTHQVPTNRFRDTNAGPSIVSQSAADEGSRTGIKGPGILSSINAGSGISEKNSS 284

Query: 706  V-LLSSHRLKSGTQNADPELSNSPRREGLNSASRQMTIFYAGQAHVFDEVHPNKADVIMA 530
              L S  + K+G   ++PE SN   R+GL SASRQMTIFY GQAHVFD+VHPNKADVIMA
Sbjct: 285  RGLPSGGKPKTGIHISEPESSNPSSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMA 344

Query: 529  LAGSNGGSWSTTYSPKSSVGHLFNETGISNRENRPGFSDLAYHPELRRNLSVPGSSTRGF 350
            LAGSNGGSWSTTYSPK +             +    +       ELR  LSV G++TRG 
Sbjct: 345  LAGSNGGSWSTTYSPKPTAS-----------QGSESYMTSGGEYELRGRLSVTGNATRGV 393

Query: 349  NQGSRLSTTVGDPVNSFSGAHQGSMNL-RRIRSFNQQAEQKNEGK 218
                R+ST         +G H GS+ + +  R+  Q  E  NE K
Sbjct: 394  GSSDRISTP--------TGGHHGSIVIAKERRNAVQAGEPSNEEK 430


>ref|XP_002324269.1| predicted protein [Populus trichocarpa] gi|222865703|gb|EEF02834.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  197 bits (502), Expect = 3e-48
 Identities = 125/278 (44%), Positives = 161/278 (57%), Gaps = 12/278 (4%)
 Frame = -3

Query: 1015 DELSFGMQPPKPTSSSHLILKHTVGSRPDSAASKWERSL-MNVGSSTQNTSCLGQFGTYV 839
            DE+ +GMQ  +P+S+S L L+ + G+R D+  SKWERS+ M VG+        GQF  + 
Sbjct: 175  DEVFYGMQSKRPSSAS-LSLQPSAGNRLDANVSKWERSIPMGVGAYPTRG---GQFVPFT 230

Query: 838  DNV--------KAGPSVISPPAADEGSRTGVKGSGMLRAINATSGVEPK-TPGVLLSSHR 686
              +         AGPSVIS  AADEGSRTG+KG G+L +INA SG+  K + G L S  +
Sbjct: 231  HQIPTNRFRDTNAGPSVISQSAADEGSRTGIKGPGILSSINAGSGISEKNSSGGLSSGGK 290

Query: 685  LKSGTQNADPELSNSPRREGLNSASRQMTIFYAGQAHVFDEVHPNKADVIMALAGSNGGS 506
             K G   ++PE S    ++GL SASRQMTIFY GQAHVFD+VHPNKADVIM+LAGSNGGS
Sbjct: 291  PKIGIHISEPESSTPASQKGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMSLAGSNGGS 350

Query: 505  WSTTYSPKSSVGHLFNETGISNRENRPGFSDLAYHPELRRNLSVPGSSTRGFNQGSRLST 326
            WSTTYSPK +          SN       ++  +  E R    V G++T     G R+ST
Sbjct: 351  WSTTYSPKPTARQGSESFMTSNEYEGAVAANTPFPHEFRGRTFVTGNATHAVGSGDRIST 410

Query: 325  TVGDPVNSFSGAHQGSMNL--RRIRSFNQQAEQKNEGK 218
                     +G H GS  +  +  R+  Q  E  NE K
Sbjct: 411  P--------AGGHHGSSIIIAKETRNLVQAREPSNEDK 440


>ref|XP_003522639.1| PREDICTED: protein TIFY 8-like [Glycine max]
          Length = 415

 Score =  194 bits (492), Expect = 4e-47
 Identities = 130/287 (45%), Positives = 167/287 (58%), Gaps = 14/287 (4%)
 Frame = -3

Query: 1033 ERPRRA--DELSFGMQPPKPTSSSHLILKHTVGSRPDSAASKWERS-LMNVGSSTQNTSC 863
            ER +R   DE+  GMQ  KP+SS   I +    ++ D  A+KWERS LMNVG S Q+   
Sbjct: 141  ERSQRPNDDEVLLGMQSMKPSSSQ--IFQPPTSTKID--ANKWERSILMNVGPSMQHPLR 196

Query: 862  LGQFGTYVDNV--------KAGPSVISPPAADEGSRTGVKGSGMLRAINATSGVEPKT-- 713
              Q   +V  +         AGPS IS  AADEGSRTG+KG G+L +INA +    KT  
Sbjct: 197  GAQLAPFVHQMASSKIRDSNAGPSFISQSAADEGSRTGIKGPGILSSINAAATATEKTIP 256

Query: 712  PGVLLSSHRLKSGTQNADPELSNSPRREGLNSASRQMTIFYAGQAHVFDEVHPNKADVIM 533
              V+L   R K GT   +     S +  GL SA RQMTIFY GQAHVFD+VHP+KADVIM
Sbjct: 257  SAVMLGGSRPKPGTNIIESSTPPSSQH-GLTSACRQMTIFYGGQAHVFDDVHPHKADVIM 315

Query: 532  ALAGSNGGSWSTTYSPKSSVGHLFNETGISNRENRPGF-SDLAYHPELRRNLSVPGSSTR 356
            ALAGSNGGSWST +SPKS V  + ++  +   EN  G  S++A+  EL   LS+ GSS+ 
Sbjct: 316  ALAGSNGGSWSTAFSPKSVV-KMVSDGNLHGGENETGLVSNVAFPQELHGKLSITGSSSH 374

Query: 355  GFNQGSRLSTTVGDPVNSFSGAHQGSMNLRRIRSFNQQAEQKNEGKR 215
                G R++T         +GAHQGS+  +  R+  Q  +  +E KR
Sbjct: 375  AIGLGDRVTTP--------AGAHQGSVFAKDTRTLVQPPDPSSEDKR 413


Top