BLASTX nr result

ID: Coptis21_contig00014445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014445
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]   166   5e-39
ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...   165   8e-39
emb|CBI20108.3| unnamed protein product [Vitis vinifera]              162   7e-38
dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thalian...   148   7e-34
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]   125   7e-27

>emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]
          Length = 667

 Score =  166 bits (419), Expect = 5e-39
 Identities = 77/130 (59%), Positives = 97/130 (74%)
 Frame = +2

Query: 41  SALHGMNNDTRDRLSGFDKFLNDTSDSQHLKSELDKYLEEPVFPRNVDFDILNWWRVNAP 220
           S+L   +ND+RDRL GFDKF+++TS +Q++ S+LDKYLEEPVFPRN DF ILNWW+V  P
Sbjct: 535 SSLPSTSNDSRDRLKGFDKFIHETSQNQNIVSDLDKYLEEPVFPRNCDFHILNWWKVQKP 594

Query: 221 KYPILFLMARDILGIPMSTVEFDSAFNIGERVLDPYRSSLETDILQALVCTHDWLRDETE 400
           +YPIL +M RD+LGIPMSTV  +  F+ G RVLD YRSSL  D  QAL+CT DWL+   E
Sbjct: 595 RYPILSMMVRDVLGIPMSTVAPEVVFSTGARVLDHYRSSLNPDTRQALICTQDWLQTGLE 654

Query: 401 GSEAIRMALS 430
           G   + +  S
Sbjct: 655 GGPLVHVIAS 664


>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  165 bits (417), Expect = 8e-39
 Identities = 77/121 (63%), Positives = 95/121 (78%)
 Frame = +2

Query: 41  SALHGMNNDTRDRLSGFDKFLNDTSDSQHLKSELDKYLEEPVFPRNVDFDILNWWRVNAP 220
           S+L   + D+RDRL GFDKFL+++S  Q   S+LDKYLEEPVFPRN DF+ILNWW+V+ P
Sbjct: 539 SSLPSTSTDSRDRLKGFDKFLHESSQGQSAISDLDKYLEEPVFPRNCDFNILNWWKVHTP 598

Query: 221 KYPILFLMARDILGIPMSTVEFDSAFNIGERVLDPYRSSLETDILQALVCTHDWLRDETE 400
           +YPIL +MARDILG PMST+  + AF +G RVLD YRSSL  D  QAL+CT DWL+ E+E
Sbjct: 599 RYPILSMMARDILGTPMSTIAPELAFGVGGRVLDSYRSSLNPDTRQALICTRDWLQVESE 658

Query: 401 G 403
           G
Sbjct: 659 G 659


>emb|CBI20108.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  162 bits (409), Expect = 7e-38
 Identities = 75/120 (62%), Positives = 93/120 (77%)
 Frame = +2

Query: 41  SALHGMNNDTRDRLSGFDKFLNDTSDSQHLKSELDKYLEEPVFPRNVDFDILNWWRVNAP 220
           S+L   +ND+RDRL GFDKF+++TS +Q++ S+LDKYLEEPVFPRN DF ILNWW+V  P
Sbjct: 535 SSLPSTSNDSRDRLKGFDKFIHETSQNQNIVSDLDKYLEEPVFPRNCDFHILNWWKVQKP 594

Query: 221 KYPILFLMARDILGIPMSTVEFDSAFNIGERVLDPYRSSLETDILQALVCTHDWLRDETE 400
           +YPIL +M RD+LGIPMSTV  +  F+ G RVLD YRSSL  D  QAL+CT DWL+   E
Sbjct: 595 RYPILSMMVRDVLGIPMSTVAPEVVFSTGARVLDHYRSSLNPDTRQALICTQDWLQTGLE 654


>dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thaliana]
           gi|18176330|gb|AAL60024.1| unknown protein [Arabidopsis
           thaliana] gi|20465375|gb|AAM20091.1| unknown protein
           [Arabidopsis thaliana]
          Length = 662

 Score =  148 bits (374), Expect = 7e-34
 Identities = 71/122 (58%), Positives = 90/122 (73%)
 Frame = +2

Query: 41  SALHGMNNDTRDRLSGFDKFLNDTSDSQHLKSELDKYLEEPVFPRNVDFDILNWWRVNAP 220
           S L   + DTRDRL GFDKFL++TS +Q+  ++LDKYL EP+FPR+ +F+ILN+W+V+ P
Sbjct: 536 SGLGRASMDTRDRLKGFDKFLHETSQNQNTTTDLDKYLSEPIFPRSGEFNILNYWKVHTP 595

Query: 221 KYPILFLMARDILGIPMSTVEFDSAFNIGERVLDPYRSSLETDILQALVCTHDWLRDETE 400
           +YPIL L+ARDILG PMS    DS FN G  V+   +SSL  DI QAL C HDWL  ETE
Sbjct: 596 RYPILSLLARDILGTPMSICAPDSTFNSGTPVISDSQSSLNPDIRQALFCAHDWLSTETE 655

Query: 401 GS 406
           G+
Sbjct: 656 GT 657


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score =  125 bits (314), Expect = 7e-27
 Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
 Frame = +2

Query: 23   SSNGLKSA--LHGMNNDTRDRLSGFDKFLNDTSDSQHLKSELDKYLEEPVFPRNVDFDIL 196
            SS+G  S   L  +  D +D LS FD F++ TS+  H KSELD YLEE V PR  DFD+L
Sbjct: 598  SSHGASSVSNLFELTYDEQDPLSKFDLFVHSTSEEGHAKSELDYYLEETVLPRISDFDVL 657

Query: 197  NWWRVNAPKYPILFLMARDILGIPMSTVEFDSAFNIGERVLDPYRSSLETDILQALVCTH 376
            +WW+ N  KYP L ++ RDI  IP+STV  +SAF+ G R++  +RS L  + L+AL+C  
Sbjct: 658  SWWKTNGIKYPTLQMIVRDIYAIPVSTVASESAFSTGGRMVSKHRSRLHPNTLEALMCAQ 717

Query: 377  DWLRDETEG-SEAIRMA 424
             WL +E EG  E I +A
Sbjct: 718  SWLGNEMEGRKELINLA 734


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