BLASTX nr result

ID: Coptis21_contig00014424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014424
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002526507.1| malic enzyme, putative [Ricinus communis] gi...   113   2e-23
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   107   1e-21
ref|XP_004157695.1| PREDICTED: NAD-dependent malic enzyme 1, mit...   102   4e-20

>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/102 (57%), Positives = 75/102 (73%)
 Frame = -3

Query: 307 MSNFSHQLRFTSSSLVKRLKHQISATSGIIMSTFERKSFATTEGSRPTIVHKRNIDILHD 128
           M NFS+Q+R  SSSL+KRL+ +++  + ++ +T   +SF T EG RPTIVHKR++DILHD
Sbjct: 1   MPNFSNQIR-ASSSLIKRLQQRMTNPAALMQAT---RSFTTLEGHRPTIVHKRSLDILHD 56

Query: 127 PWFNKGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLK 2
           PWFNKGTAFSMTE             VMSS+QQI+RFMVDLK
Sbjct: 57  PWFNKGTAFSMTERDRLDIRGLLPPNVMSSEQQIQRFMVDLK 98


>ref|XP_002526507.1| malic enzyme, putative [Ricinus communis]
           gi|223534182|gb|EEF35898.1| malic enzyme, putative
           [Ricinus communis]
          Length = 626

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/102 (58%), Positives = 74/102 (72%)
 Frame = -3

Query: 307 MSNFSHQLRFTSSSLVKRLKHQISATSGIIMSTFERKSFATTEGSRPTIVHKRNIDILHD 128
           MSNFS+Q+R  S+SL+KRLK +++  + +  S    +SF TTEG RPTIVHKR++DILHD
Sbjct: 1   MSNFSNQIR-ASASLIKRLKDRLANPALLNQS----RSFTTTEGHRPTIVHKRSLDILHD 55

Query: 127 PWFNKGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLK 2
           PWFNKGTAFSMTE             +MSS+QQIERFM DLK
Sbjct: 56  PWFNKGTAFSMTERDRLDLRGLLPPNIMSSEQQIERFMADLK 97


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/102 (55%), Positives = 73/102 (71%)
 Frame = -3

Query: 307 MSNFSHQLRFTSSSLVKRLKHQISATSGIIMSTFERKSFATTEGSRPTIVHKRNIDILHD 128
           MSNFS+Q+R  SSSL+KRLK +++  + ++ +T   + F T EG RPTIVHKR++DILHD
Sbjct: 1   MSNFSNQIR-ASSSLIKRLKQRMTNPAALMQAT---RHFTTLEGHRPTIVHKRSLDILHD 56

Query: 127 PWFNKGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLK 2
           PWFNKGTAFSMTE             VM+S+QQI+RF  DLK
Sbjct: 57  PWFNKGTAFSMTERDRLDLRGLLPPNVMTSEQQIQRFAADLK 98


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
           protein product [Vitis vinifera]
          Length = 625

 Score =  107 bits (267), Expect = 1e-21
 Identities = 58/102 (56%), Positives = 72/102 (70%)
 Frame = -3

Query: 307 MSNFSHQLRFTSSSLVKRLKHQISATSGIIMSTFERKSFATTEGSRPTIVHKRNIDILHD 128
           MSNF  Q++  SS L++RLKH+   +S  ++S   R+SF TTEG RP++VHKR++DILHD
Sbjct: 1   MSNFCRQIKLPSS-LIRRLKHR---SSNSMLSG--RRSFTTTEGHRPSLVHKRSLDILHD 54

Query: 127 PWFNKGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLK 2
           PWFNKGTAFSMTE             VMS + QIERFMVDLK
Sbjct: 55  PWFNKGTAFSMTERDRLDLRGLLPPTVMSPEMQIERFMVDLK 96


>ref|XP_004157695.1| PREDICTED: NAD-dependent malic enzyme 1, mitochondrial-like
           [Cucumis sativus]
          Length = 350

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = -3

Query: 274 SSSLVKRLKHQISATSGIIMSTFERKSFATTEGSRPTIVHKRNIDILHDPWFNKGTAFSM 95
           S+SL+KRLK      +GI  +  + +SF T+EG RPTIVHKR++DILHDPWFNKGTAF++
Sbjct: 8   SASLMKRLKLHYQMINGI-PALAQARSFTTSEGHRPTIVHKRSLDILHDPWFNKGTAFTI 66

Query: 94  TEXXXXXXXXXXXXGVMSSQQQIERFMVDLK 2
           TE             VMSS+QQIERFMVDLK
Sbjct: 67  TERDRLDLRGLLPPNVMSSEQQIERFMVDLK 97


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