BLASTX nr result

ID: Coptis21_contig00014409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014409
         (1715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279644.2| PREDICTED: uncharacterized protein LOC100243...   365   3e-98
ref|XP_002326696.1| predicted protein [Populus trichocarpa] gi|2...   339   2e-90
ref|XP_002329542.1| predicted protein [Populus trichocarpa] gi|2...   325   2e-86
ref|XP_002528800.1| conserved hypothetical protein [Ricinus comm...   324   5e-86
ref|XP_003550930.1| PREDICTED: uncharacterized protein LOC100816...   295   3e-77

>ref|XP_002279644.2| PREDICTED: uncharacterized protein LOC100243688 [Vitis vinifera]
          Length = 384

 Score =  365 bits (936), Expect = 3e-98
 Identities = 198/346 (57%), Positives = 244/346 (70%), Gaps = 8/346 (2%)
 Frame = -3

Query: 1542 KNLRGLNKPKCSQCGNVARSRCPFLACKNCCFKAQNPCPIHVLKQNGNLPDKIPAQTSPL 1363
            KNLRGLNKPKC QCGNVARSRCP+ +CK+CC KAQNPC IHVLK N   PD+ P+ +SPL
Sbjct: 50   KNLRGLNKPKCIQCGNVARSRCPYQSCKSCCAKAQNPCHIHVLKANATFPDRTPSSSSPL 109

Query: 1362 VDQKSTDASPPGTSIRASSLRQLS----QFNGPQVSLRARRPLTRKDAAAINQWRFSKLK 1195
             DQ+ST+ SP GTS+R +SLRQLS    QFN  Q+ LR+R+PLTRKDAA IN+WRFSKLK
Sbjct: 110  FDQQSTEVSPSGTSLRVASLRQLSNNFAQFNNVQMPLRSRKPLTRKDAATINEWRFSKLK 169

Query: 1194 EYKERNIEVENEAFDRYMQNVNLLEEAFLVNSSPETIADE-LSVLDPISANKEEDTRRTL 1018
            EYK RNIEVENEAFDRYMQN++LLEE F V S+P+   D  +SV D  S N E+++   +
Sbjct: 170  EYKNRNIEVENEAFDRYMQNISLLEEVFSVKSTPDGTTDHGISVSDAASPNLEDNSSVMV 229

Query: 1017 LGLKAQLRSNPRRVETFRKRVQDIVDQGLRKLG--RSVNDDGETGNASDLDGLKEAKRLK 844
              LK +L+SNP R +  RKR+ +IVD+GL+KL     +ND  E    S        KR K
Sbjct: 230  SWLKLRLKSNPTRSDNSRKRILEIVDRGLKKLNYVNDLNDQNELPAGS--------KRPK 281

Query: 843  STTSLRAERVSAVDELIDKLNKARNEDDLQSCLQMKSQLFNHHEKAYLTEAEVVDISKEE 664
            +    RA+R+SA+ ELIDKLNKARNE+DL SC++MKSQ+FN + +    E E VD   E+
Sbjct: 282  TG---RADRLSALSELIDKLNKARNEEDLNSCMEMKSQIFNTNTETSQAEIEEVDTYTEQ 338

Query: 663  ISEGDLTRMQES-ILPPKLWSRVEINQESLENIEKHFSSLDQIEDL 529
             ++ DL  M ES    PK     EI+QESL NI+ HFSS  QIEDL
Sbjct: 339  TAKDDLAPMHESNYTLPKFLGTTEIDQESLNNIDVHFSSTVQIEDL 384


>ref|XP_002326696.1| predicted protein [Populus trichocarpa] gi|222834018|gb|EEE72495.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  339 bits (869), Expect = 2e-90
 Identities = 181/347 (52%), Positives = 244/347 (70%), Gaps = 9/347 (2%)
 Frame = -3

Query: 1542 KNLRGLNKPKCSQCGNVARSRCPFLACKNCCFKAQNPCPIHVLKQNGNLPDKIPAQTSPL 1363
            K LRGLNKPKC QCGNVARSRCP+ +CK+CC +AQNPC IHVLK N   PDK PA ++PL
Sbjct: 33   KTLRGLNKPKCIQCGNVARSRCPYQSCKSCCSRAQNPCHIHVLKANATFPDKTPASSAPL 92

Query: 1362 VDQKSTDASPPGTSIRASSLRQL----SQFNGPQVSLRARRPLTRKDAAAINQWRFSKLK 1195
             +Q+  +A P  +S R +SLRQL    SQFN     LR+R+ LTRK+AAAIN+WRFSKLK
Sbjct: 93   FEQQPNEAPPAVSSHRTASLRQLSSNFSQFNNLHSPLRSRKSLTRKEAAAINEWRFSKLK 152

Query: 1194 EYKERNIEVENEAFDRYMQNVNLLEEAFLVNSSPETIADELSVL---DPISANKEEDTRR 1024
            E+K+RNIEVENEAFDRYM N++LLEE F + S  E   ++ S+    D  SA  ++   +
Sbjct: 153  EFKDRNIEVENEAFDRYMHNISLLEEVFSLKSFLEGSTEDGSLSSNHDHASAEDDDTEEK 212

Query: 1023 TLLGLKAQLRSNPRRVETFRKRVQDIVDQGLRKLGRSVNDDGETGNASDLDGLKEAKRLK 844
             +   K +LRSNPRR E  RKR+Q +VD GL+KL +   ++G   N ++LD     KR +
Sbjct: 213  MVSEQKLKLRSNPRRSENVRKRLQQLVDGGLKKLQKLELNNGSVNNQNELD-----KRPE 267

Query: 843  STTSLRAERVSAVDELIDKLNKARNEDDLQSCLQMKSQLFNHHEKAYLTEAEVVDISKEE 664
                LRAER SA+ +LIDKLNKARNE+DL SC+++K+QL + H ++  TE + V++SKE+
Sbjct: 268  KAKGLRAERASALSDLIDKLNKARNEEDLNSCMEIKAQLSSQHTRS-RTETKDVEVSKEQ 326

Query: 663  ISEGDLTRMQESI--LPPKLWSRVEINQESLENIEKHFSSLDQIEDL 529
            I++ DL   Q+ +     KL+  VEI+ ++L +I+ HFSSL++IEDL
Sbjct: 327  IAKNDLAPPQKELDYFSQKLFRTVEIDHQALTSIDAHFSSLEKIEDL 373


>ref|XP_002329542.1| predicted protein [Populus trichocarpa] gi|222870251|gb|EEF07382.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  325 bits (833), Expect = 2e-86
 Identities = 178/345 (51%), Positives = 241/345 (69%), Gaps = 7/345 (2%)
 Frame = -3

Query: 1542 KNLRGLNKPKCSQCGNVARSRCPFLACKNCCFKAQNPCPIHVLKQNGNLPDKIPAQTSPL 1363
            K LRGLNKPKC QCGNVARSRCP+ +CK+CC +AQNPC IHVLK N   PDK PA ++PL
Sbjct: 28   KTLRGLNKPKCIQCGNVARSRCPYQSCKSCCSRAQNPCHIHVLKANATFPDKSPASSAPL 87

Query: 1362 VDQKSTDASPPGTSIRASSLRQL----SQFNGPQVSLRARRPLTRKDAAAINQWRFSKLK 1195
             +Q+  +A PP  S RA+SLRQL    SQFN     LR+R+PLTRK+AAAIN+WRFSKLK
Sbjct: 88   FEQQVNEA-PPAVSHRAASLRQLSSNFSQFNNLHSPLRSRKPLTRKEAAAINEWRFSKLK 146

Query: 1194 EYKERNIEVENEAFDRYMQNVNLLEEAFLVNSSPE-TIADELSVLDPISANKEEDTRRTL 1018
            E+++RNIEVENEAFDRYM N++LLEE F + S  E +  DE    +   A+ +EDT   +
Sbjct: 147  EFRDRNIEVENEAFDRYMHNISLLEEVFSLKSFLEGSTEDESLSSNHDHASAKEDTEEKM 206

Query: 1017 LG-LKAQLRSNPRRVETFRKRVQDIVDQGLRKLGRSVNDDGETGNASDLDGLKEAKRLKS 841
            +   K +LRSN  R E  RKR+Q IVD GL+KL +   ++G   N  ++D     KR + 
Sbjct: 207  VSEQKLKLRSNLSRSENDRKRLQQIVDVGLKKLQKLELNNGSVNNQKEVD-----KRPEK 261

Query: 840  TTSLRAERVSAVDELIDKLNKARNEDDLQSCLQMKSQLFNHHEKAYLTEAEVVDISKEEI 661
              SLRAE+ SA+ +L+DKLNKARNE+DL+SC + K+QL++ H ++  TE +  ++ +E+ 
Sbjct: 262  AKSLRAEKASALSDLMDKLNKARNEEDLKSCSETKAQLYSQHARS-RTEIKDFEVLREQT 320

Query: 660  SEGDLTRMQE-SILPPKLWSRVEINQESLENIEKHFSSLDQIEDL 529
            ++ D+   +E      KL+  VEI+ E+L +I+ HFSSL++IEDL
Sbjct: 321  AKKDVAPQKEMDFFSQKLFRAVEIDHEALTSIDAHFSSLEKIEDL 365


>ref|XP_002528800.1| conserved hypothetical protein [Ricinus communis]
            gi|223531803|gb|EEF33622.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 366

 Score =  324 bits (830), Expect = 5e-86
 Identities = 180/357 (50%), Positives = 233/357 (65%), Gaps = 9/357 (2%)
 Frame = -3

Query: 1572 PQQLRDQQTGKNLRGLNKPKCSQCGNVARSRCPFLACKNCCFKAQNPCPIHVLKQNGNLP 1393
            P  LR     K LRGLNKPKC QCGNVARSRCP+ +CK+CC KAQNPC IHVLK N   P
Sbjct: 23   PHSLRMDTPPKTLRGLNKPKCIQCGNVARSRCPYQSCKSCCSKAQNPCHIHVLKANATFP 82

Query: 1392 DKIPAQTSPLVDQKSTDASPPGTSIRASSLRQL----SQFNGPQVSLRARRPLTRKDAAA 1225
            DK P  ++P+ DQ+ T+ SP  +S+R +SLRQL    SQFN  Q S R+++P+TRK+AAA
Sbjct: 83   DKTPTSSTPVSDQQPTEVSPVASSLRVASLRQLSNQFSQFNNLQTS-RSKKPMTRKEAAA 141

Query: 1224 INQWRFSKLKEYKERNIEVENEAFDRYMQNVNLLEEAFLVNSSPETIADELS-----VLD 1060
            IN+WRFSKLKE++E NIEVENEAFDRYMQN++LLEE F V S  E+   E S      L+
Sbjct: 142  INEWRFSKLKEHREGNIEVENEAFDRYMQNISLLEEVFSVKSILESSIKESSEGGSLPLN 201

Query: 1059 PISANKEEDTRRTLLGLKAQLRSNPRRVETFRKRVQDIVDQGLRKLGRSVNDDGETGNAS 880
            P   + E+D  +     K +LR NP R E  RKR+Q IVD GL+KL +   +DG     +
Sbjct: 202  PEHVSTEDDREKVTSVQKLKLRLNPTRSENVRKRIQQIVDVGLKKLQKLEFEDGVNDTHT 261

Query: 879  DLDGLKEAKRLKSTTSLRAERVSAVDELIDKLNKARNEDDLQSCLQMKSQLFNHHEKAYL 700
            D++     KR +    L AER SA+ EL +KLNKARNE+DL SC++MK QL++H  +   
Sbjct: 262  DIE---HDKRPEKKEKLWAERASALSELTEKLNKARNEEDLTSCMEMKMQLYSHQGQ--- 315

Query: 699  TEAEVVDISKEEISEGDLTRMQESILPPKLWSRVEINQESLENIEKHFSSLDQIEDL 529
            TE      +K+E S     + +   L  KL+  VEI+QE L  I  HFSSL+++ +L
Sbjct: 316  TE------TKDEASHKQTVKKELDYLSQKLFRTVEIDQEDLNKIGAHFSSLEKVANL 366


>ref|XP_003550930.1| PREDICTED: uncharacterized protein LOC100816049 [Glycine max]
          Length = 380

 Score =  295 bits (755), Expect = 3e-77
 Identities = 167/343 (48%), Positives = 222/343 (64%), Gaps = 5/343 (1%)
 Frame = -3

Query: 1542 KNLRGLNKPKCSQCGNVARSRCPFLACKNCCFKAQNPCPIHVLKQNGNLPDKIPAQTSPL 1363
            K+ RG NKPKC QCGNVARSRCP+  CK+CC + QNPC IHVLK N   PDK P+  +  
Sbjct: 50   KSQRGHNKPKCKQCGNVARSRCPYECCKSCCSRNQNPCHIHVLKANSTFPDKAPSSGASP 109

Query: 1362 VDQKSTDASPPGTSIRASSLRQLS----QFNGPQVSLRARRPLTRKDAAAINQWRFSKLK 1195
            +DQ+S D  P  T+ R +SLRQLS    QFN   +SLR+++PLTRKDAAAIN+WRF+K+K
Sbjct: 110  LDQQSLDP-PQSTAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFAKIK 168

Query: 1194 EYKERNIEVENEAFDRYMQNVNLLEEAFLVNSSPETIADELSVLDPISANKEEDTRRTLL 1015
            EYKERN+EVENEAFDRYMQNV+LLEE   V S  E +   L      +    E     + 
Sbjct: 169  EYKERNVEVENEAFDRYMQNVDLLEEVLAVKSLDENVPSALE----SNPTTMESNEAMIP 224

Query: 1014 GLKAQLRSNPRRVETFRKRVQDIVDQGLRKLGRSVNDDGETGNASDLDGLKEAKRLKSTT 835
            GLK QLRSN  R +  R R+Q IVD+GL+KL +S   DG+   + D +  K ++R K   
Sbjct: 225  GLKLQLRSNSMRSDGLRMRIQQIVDEGLKKLKKSA-VDGDINESIDDESNKASERGKG-- 281

Query: 834  SLRAERVSAVDELIDKLNKARNEDDLQSCLQMKSQLFNHHEKAYLTEAEVVDISKEEISE 655
                ER+SA+ +L++K+NKAR E+DL+ CL+MK+QLFN  E A + + +  ++ + E   
Sbjct: 282  ---IERLSAISDLMEKINKARTEEDLKPCLEMKTQLFNLDEGASVKDLQDNEMHENETVV 338

Query: 654  GDLTRMQE-SILPPKLWSRVEINQESLENIEKHFSSLDQIEDL 529
             D+   +      PK  +  EI+ E+L  I+KHFS+ D IE L
Sbjct: 339  TDVVPAEGLDYSLPKFVTTTEIDLETLNTIDKHFSTQD-IEQL 380


Top