BLASTX nr result
ID: Coptis21_contig00014408
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014408 (1039 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2... 422 e-122 ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi... 417 e-122 ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arab... 417 e-121 ref|NP_177601.1| pentatricopeptide repeat-containing protein [Ar... 411 e-120 dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana] gi|6... 411 e-120 >ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa] Length = 643 Score = 422 bits (1086), Expect(2) = e-122 Identities = 204/310 (65%), Positives = 244/310 (78%) Frame = -2 Query: 930 LHRKTILQPDSFSFAFLFKAVAN*KSLNDGIQ*HCDLVRRGFDTHLFVGTAIVSMYAECG 751 + R + PDSFSFAF+ KA AN +S+ GIQ HC + G DTHLFVGT ++SMY ECG Sbjct: 96 MRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECG 155 Query: 750 CTGFSRKAFDELPEPNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSWNVMIAGYMK 571 GF+RK FDE+PEPN +AWNA+VTAC R GD+KG LF MP+RNL SWNVM+AGY K Sbjct: 156 FVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTK 215 Query: 570 GGELESAKRVFGEMTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGV 391 GELE A+ +F EM KD+VSWSTMIVGFAHNG F+EAF FFREL GMR NE SLTGV Sbjct: 216 AGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGV 275 Query: 390 LSACAQSGAFEFGKVLHGYIEKAGLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKN 211 LSACAQ+GA EFGK+LHG+IEK+GL IVSV+NALLDTYS+CGNV MA+ VF +MN++N Sbjct: 276 LSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERN 335 Query: 210 VISWTSMIAAYAMHGLGEEAVQLFYEMELLGICPDGITFISVLYACSHAGLIEEGIILFH 31 ++SWTSM+AA AMHG GEEA+ +F++ME GI PD I FIS+LYACSHAGL+E+G F Sbjct: 336 IVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFD 395 Query: 30 KMQVTYGIEP 1 KM+ Y IEP Sbjct: 396 KMKGMYNIEP 405 Score = 45.1 bits (105), Expect(2) = e-122 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = -3 Query: 1037 YSRELLIQIPSPDIFMYNTLIRGLSQSNAPQRSILTYI 924 Y+ L P+PD+FM+NTLIRGL +S+ PQ S+L +I Sbjct: 57 YACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFI 94 Score = 71.6 bits (174), Expect = 3e-10 Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 11/205 (5%) Frame = -2 Query: 708 PNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSW-----NVMIAGYMKGGELESAKR 544 PN + +++AC + G ++ ++L + L +W N ++ Y K G + A+ Sbjct: 267 PNETSLTGVLSACAQAGALEFGKILHGFIEKSGL-AWIVSVNNALLDTYSKCGNVLMAQL 325 Query: 543 VFGE-MTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLSACAQSG 367 VF M ++ VSW++M+ A +G +EA G F ++ G+R +E++ +L AC+ +G Sbjct: 326 VFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAG 385 Query: 366 AFEFGKVLHGYIEKAGLGLIVSVSN--ALLDTYSRCGNVDMARSVFNWMMNDKNVISWTS 193 E G + K + S+ + ++D Y R G + A M I W + Sbjct: 386 LVEQGCEYFDKM-KGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRT 444 Query: 192 MIAAYAMHG---LGEEAVQLFYEME 127 ++ A +MHG L E+ + E++ Sbjct: 445 LLGACSMHGDVKLAEQVKERLSELD 469 >ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like [Cucumis sativus] gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like [Cucumis sativus] Length = 642 Score = 417 bits (1072), Expect(2) = e-122 Identities = 200/310 (64%), Positives = 248/310 (80%) Frame = -2 Query: 930 LHRKTILQPDSFSFAFLFKAVAN*KSLNDGIQ*HCDLVRRGFDTHLFVGTAIVSMYAECG 751 + RK++ PDSFSFAFL KA AN ++L +G+Q HC V G D+HLFVGT ++SMYAEC Sbjct: 96 MRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECA 155 Query: 750 CTGFSRKAFDELPEPNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSWNVMIAGYMK 571 C F+RK FDE+ EPN+VAWNAIV ACFRC VK AE +F MP+RNLTSWN+M+AGY K Sbjct: 156 CLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTK 215 Query: 570 GGELESAKRVFGEMTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGV 391 GEL+ A+ VF +M KD+VSWSTMIVGFAHNG+F++AF FFRE+ GMR NEVSLTGV Sbjct: 216 AGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGV 275 Query: 390 LSACAQSGAFEFGKVLHGYIEKAGLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKN 211 LSACAQ+GAFEFG++LHG++EK+G I+SV+NAL+DTYS+CGN+DMAR VF+ M+ ++ Sbjct: 276 LSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLR-RS 334 Query: 210 VISWTSMIAAYAMHGLGEEAVQLFYEMELLGICPDGITFISVLYACSHAGLIEEGIILFH 31 +SWT+MIA AMHG GEEA++LF EME I PD ITFIS+LYACSHAGL++ G F Sbjct: 335 AVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFS 394 Query: 30 KMQVTYGIEP 1 +M TYGIEP Sbjct: 395 RMVNTYGIEP 404 Score = 47.8 bits (112), Expect(2) = e-122 Identities = 19/38 (50%), Positives = 28/38 (73%) Frame = -3 Query: 1037 YSRELLIQIPSPDIFMYNTLIRGLSQSNAPQRSILTYI 924 Y+R L + I +PD+FMYNTLIRGLS S+ P ++ ++ Sbjct: 57 YARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFV 94 Score = 85.1 bits (209), Expect = 3e-14 Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 5/197 (2%) Frame = -2 Query: 741 FSRKAFDELPEPNVVAWNAIVTACFRCGDVKGAEVLFSEMP----LRNLTSWNVMIAGYM 574 F R+ E PN V+ +++AC + G + +L + L+ ++ N +I Y Sbjct: 256 FFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYS 315 Query: 573 KGGELESAKRVFGEMTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTG 394 K G L+ A+ VF M + VSW+ MI G A +G +EA F E+ ++ + ++ Sbjct: 316 KCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFIS 375 Query: 393 VLSACAQSGAFEFG-KVLHGYIEKAGLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMND 217 +L AC+ +G + G + G+ ++ ++D Y R G + A M Sbjct: 376 ILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPIS 435 Query: 216 KNVISWTSMIAAYAMHG 166 N I W +++ A ++HG Sbjct: 436 PNDIVWRTLLGACSIHG 452 >ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp. lyrata] gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp. lyrata] Length = 1221 Score = 417 bits (1072), Expect(2) = e-121 Identities = 198/308 (64%), Positives = 241/308 (78%) Frame = -2 Query: 924 RKTILQPDSFSFAFLFKAVAN*KSLNDGIQ*HCDLVRRGFDTHLFVGTAIVSMYAECGCT 745 RK + PDSFSFAF+ KA AN +SL G Q HC ++ G D+HLFV T ++ MY ECGC Sbjct: 265 RKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCV 324 Query: 744 GFSRKAFDELPEPNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSWNVMIAGYMKGG 565 GF+RK FDE+P+PN+VAWNA+VTACFR DV GA +F +M +RN TSWNVM+AGY+K G Sbjct: 325 GFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAG 384 Query: 564 ELESAKRVFGEMTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLS 385 ELE AKR+F EM +D+VSWSTMIVGF+HNGSF+E+F +FREL MR NEVSLTGVLS Sbjct: 385 ELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLS 444 Query: 384 ACAQSGAFEFGKVLHGYIEKAGLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKNVI 205 AC+QSGAFEFGK LHG++EK+G IVSV+NAL+D YSRCGNV MAR VF M ++++ Sbjct: 445 ACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIV 504 Query: 204 SWTSMIAAYAMHGLGEEAVQLFYEMELLGICPDGITFISVLYACSHAGLIEEGIILFHKM 25 SWTSMIA AMHG GEEA+++F EM G+ PD I+FIS+LYACSHAGLI+EG F KM Sbjct: 505 SWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKM 564 Query: 24 QVTYGIEP 1 + Y IEP Sbjct: 565 KRVYHIEP 572 Score = 47.0 bits (110), Expect(2) = e-121 Identities = 18/38 (47%), Positives = 27/38 (71%) Frame = -3 Query: 1037 YSRELLIQIPSPDIFMYNTLIRGLSQSNAPQRSILTYI 924 Y+R LL+ P PD FM+NTL+RG S+S+ P S+ ++ Sbjct: 224 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFV 261 Score = 77.8 bits (190), Expect = 4e-12 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%) Frame = -2 Query: 708 PNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSW-----NVMIAGYMKGGELESAKR 544 PN V+ +++AC + G + + L + ++ SW N +I Y + G + A+ Sbjct: 434 PNEVSLTGVLSACSQSGAFEFGKTLHGFVE-KSGYSWIVSVNNALIDMYSRCGNVPMARL 492 Query: 543 VFGEMTAKDE-VSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLSACAQSG 367 VF M K VSW++MI G A +G +EA F E+T G+ +E+S +L AC+ +G Sbjct: 493 VFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAG 552 Query: 366 AFEFGKVLHGYIEKAG----LGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKNVISW 199 + G+ GY K + V ++D Y R G + A S M I W Sbjct: 553 LIKEGE---GYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVW 609 Query: 198 TSMIAAYAMHG---LGEEAVQLFYEME 127 +++ A + HG L E+ Q E++ Sbjct: 610 RTLLGACSSHGNIELAEQVKQRLNELD 636 >ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630 gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana] gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 643 Score = 411 bits (1057), Expect(2) = e-120 Identities = 197/308 (63%), Positives = 240/308 (77%) Frame = -2 Query: 924 RKTILQPDSFSFAFLFKAVAN*KSLNDGIQ*HCDLVRRGFDTHLFVGTAIVSMYAECGCT 745 RK + PDSFSFAF+ KAV N +SL G Q HC ++ G ++HLFVGT ++ MY CGC Sbjct: 98 RKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCV 157 Query: 744 GFSRKAFDELPEPNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSWNVMIAGYMKGG 565 F+RK FDE+ +PN+VAWNA++TACFR DV GA +F +M +RN TSWNVM+AGY+K G Sbjct: 158 EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAG 217 Query: 564 ELESAKRVFGEMTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLS 385 ELESAKR+F EM +D+VSWSTMIVG AHNGSF+E+F +FREL GM NEVSLTGVLS Sbjct: 218 ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLS 277 Query: 384 ACAQSGAFEFGKVLHGYIEKAGLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKNVI 205 AC+QSG+FEFGK+LHG++EKAG IVSV+NAL+D YSRCGNV MAR VF M + ++ Sbjct: 278 ACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 337 Query: 204 SWTSMIAAYAMHGLGEEAVQLFYEMELLGICPDGITFISVLYACSHAGLIEEGIILFHKM 25 SWTSMIA AMHG GEEAV+LF EM G+ PDGI+FIS+L+ACSHAGLIEEG F +M Sbjct: 338 SWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 397 Query: 24 QVTYGIEP 1 + Y IEP Sbjct: 398 KRVYHIEP 405 Score = 47.0 bits (110), Expect(2) = e-120 Identities = 18/38 (47%), Positives = 27/38 (71%) Frame = -3 Query: 1037 YSRELLIQIPSPDIFMYNTLIRGLSQSNAPQRSILTYI 924 Y+R LL+ P PD FM+NTL+RG S+S+ P S+ ++ Sbjct: 57 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFV 94 Score = 74.3 bits (181), Expect = 5e-11 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%) Frame = -2 Query: 708 PNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSW-----NVMIAGYMKGGELESAKR 544 PN V+ +++AC + G + ++L + SW N +I Y + G + A+ Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY-SWIVSVNNALIDMYSRCGNVPMARL 325 Query: 543 VFGEMTAKD-EVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLSACAQSG 367 VF M K VSW++MI G A +G +EA F E+T+ G+ + +S +L AC+ +G Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385 Query: 366 AFEFGKVLHGYIEKA-GLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKNVISWTSM 190 E G+ +++ + + ++D Y R G + A M I W ++ Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445 Query: 189 IAAYAMHG---LGEEAVQLFYEME 127 + A + HG L E+ Q E++ Sbjct: 446 LGACSSHGNIELAEQVKQRLNELD 469 >dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana] gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana] Length = 635 Score = 411 bits (1057), Expect(2) = e-120 Identities = 197/308 (63%), Positives = 240/308 (77%) Frame = -2 Query: 924 RKTILQPDSFSFAFLFKAVAN*KSLNDGIQ*HCDLVRRGFDTHLFVGTAIVSMYAECGCT 745 RK + PDSFSFAF+ KAV N +SL G Q HC ++ G ++HLFVGT ++ MY CGC Sbjct: 90 RKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCV 149 Query: 744 GFSRKAFDELPEPNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSWNVMIAGYMKGG 565 F+RK FDE+ +PN+VAWNA++TACFR DV GA +F +M +RN TSWNVM+AGY+K G Sbjct: 150 EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAG 209 Query: 564 ELESAKRVFGEMTAKDEVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLS 385 ELESAKR+F EM +D+VSWSTMIVG AHNGSF+E+F +FREL GM NEVSLTGVLS Sbjct: 210 ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLS 269 Query: 384 ACAQSGAFEFGKVLHGYIEKAGLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKNVI 205 AC+QSG+FEFGK+LHG++EKAG IVSV+NAL+D YSRCGNV MAR VF M + ++ Sbjct: 270 ACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 329 Query: 204 SWTSMIAAYAMHGLGEEAVQLFYEMELLGICPDGITFISVLYACSHAGLIEEGIILFHKM 25 SWTSMIA AMHG GEEAV+LF EM G+ PDGI+FIS+L+ACSHAGLIEEG F +M Sbjct: 330 SWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 389 Query: 24 QVTYGIEP 1 + Y IEP Sbjct: 390 KRVYHIEP 397 Score = 47.0 bits (110), Expect(2) = e-120 Identities = 18/38 (47%), Positives = 27/38 (71%) Frame = -3 Query: 1037 YSRELLIQIPSPDIFMYNTLIRGLSQSNAPQRSILTYI 924 Y+R LL+ P PD FM+NTL+RG S+S+ P S+ ++ Sbjct: 49 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFV 86 Score = 74.3 bits (181), Expect = 5e-11 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%) Frame = -2 Query: 708 PNVVAWNAIVTACFRCGDVKGAEVLFSEMPLRNLTSW-----NVMIAGYMKGGELESAKR 544 PN V+ +++AC + G + ++L + SW N +I Y + G + A+ Sbjct: 259 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY-SWIVSVNNALIDMYSRCGNVPMARL 317 Query: 543 VFGEMTAKD-EVSWSTMIVGFAHNGSFDEAFGFFRELTSVGMRANEVSLTGVLSACAQSG 367 VF M K VSW++MI G A +G +EA F E+T+ G+ + +S +L AC+ +G Sbjct: 318 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 377 Query: 366 AFEFGKVLHGYIEKA-GLGLIVSVSNALLDTYSRCGNVDMARSVFNWMMNDKNVISWTSM 190 E G+ +++ + + ++D Y R G + A M I W ++ Sbjct: 378 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 437 Query: 189 IAAYAMHG---LGEEAVQLFYEME 127 + A + HG L E+ Q E++ Sbjct: 438 LGACSSHGNIELAEQVKQRLNELD 461