BLASTX nr result

ID: Coptis21_contig00014402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014402
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535145.1| PREDICTED: uncharacterized protein LOC100818...    82   6e-14
ref|XP_002283542.1| PREDICTED: uncharacterized protein LOC100248...    80   1e-13
ref|XP_003518991.1| PREDICTED: uncharacterized protein LOC100786...    74   1e-11
ref|XP_003624887.1| hypothetical protein MTR_7g088720 [Medicago ...    74   1e-11
ref|XP_002876373.1| hypothetical protein ARALYDRAFT_324170 [Arab...    71   1e-10

>ref|XP_003535145.1| PREDICTED: uncharacterized protein LOC100818532 [Glycine max]
          Length = 507

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/101 (44%), Positives = 66/101 (65%)
 Frame = -1

Query: 317 MGKFEQDNHILPSSVLSQFSNSNQNDISICCSKFVGFRCILVFMFGLAVLLSAIFLLPPF 138
           MGK   ++H+LPS V ++    N      C    VGFRC++V +F +AV LSA+F LPPF
Sbjct: 1   MGK-PGEHHLLPSGVAAEDPRRNAASPPGCA---VGFRCLVVLLFSVAVFLSALFWLPPF 56

Query: 137 SSRYKHRSDLDLNSLIQAHEVVASFKLQRPVSMLKANILQI 15
            + +    DL +NS  + H++VASF +Q+PVS+L+ NILQ+
Sbjct: 57  -AHFADPKDLHINSKYKDHDIVASFYVQKPVSLLEENILQL 96


>ref|XP_002283542.1| PREDICTED: uncharacterized protein LOC100248215 [Vitis vinifera]
           gi|297741707|emb|CBI32839.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/103 (44%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = -1

Query: 317 MGKFEQDNHILPSSVLSQFSNSNQNDISICCSKF-VGFRCILVFMFGLAVLLSAIFLLPP 141
           MGK E++  +  + V+S+   S+QN  S C  +  VGFRC+L  + G AV+LSAIF LPP
Sbjct: 1   MGKVEEEQPLPSAIVVSE--PSDQNVGSRCRIRGRVGFRCVLALLLGAAVMLSAIFWLPP 58

Query: 140 FSSRYKHRSDLDLNSLIQAHEVVASFKLQRPVSMLKANILQIE 12
           F  +Y  + DLDL+S  + H++VASFK+++ +S+L+  +LQ+E
Sbjct: 59  F-LQYADQRDLDLDSRFRGHDIVASFKVKKSISLLEDYLLQLE 100


>ref|XP_003518991.1| PREDICTED: uncharacterized protein LOC100786981 [Glycine max]
          Length = 483

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/101 (44%), Positives = 64/101 (63%)
 Frame = -1

Query: 317 MGKFEQDNHILPSSVLSQFSNSNQNDISICCSKFVGFRCILVFMFGLAVLLSAIFLLPPF 138
           MGK  +D+  LPS+   +    N    S C    VG RC++V +F +AV LSA+F LPPF
Sbjct: 1   MGKPGEDHLSLPSA---EDPRRNAAAASGCA---VGLRCLVVLLFSVAVFLSALFWLPPF 54

Query: 137 SSRYKHRSDLDLNSLIQAHEVVASFKLQRPVSMLKANILQI 15
           +  +    DL LNS  + H++VASF +Q+PVS+L+ NILQ+
Sbjct: 55  A-HFADPKDLYLNSKYKDHDIVASFYVQKPVSLLEDNILQL 94


>ref|XP_003624887.1| hypothetical protein MTR_7g088720 [Medicago truncatula]
           gi|355499902|gb|AES81105.1| hypothetical protein
           MTR_7g088720 [Medicago truncatula]
          Length = 512

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
 Frame = -1

Query: 317 MGKFEQDNHILPSSVLSQFSNSNQNDISICCS----KFVGFRCILVFMFGLAVLLSAIFL 150
           MGK E++ H LP  V S     N      C S    K +GFRCILVF+F LA+ LSA+F 
Sbjct: 1   MGKAEEEQH-LPRGVTSSDPPQNTETQCRCSSSQIRKLLGFRCILVFIFSLALFLSALFW 59

Query: 149 LPPFSSRYKHRSDLDLNSLIQAHEVVASFKLQRPVSMLKANILQIELGI 3
           LPPF       ++L  NS  + H++VASF + + V +L+ N LQ+E  I
Sbjct: 60  LPPFVD----HNNLYDNSKYKGHDIVASFIVNKSVPVLEDNKLQLEADI 104


>ref|XP_002876373.1| hypothetical protein ARALYDRAFT_324170 [Arabidopsis lyrata subsp.
           lyrata] gi|297322211|gb|EFH52632.1| hypothetical protein
           ARALYDRAFT_324170 [Arabidopsis lyrata subsp. lyrata]
          Length = 585

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
 Frame = -1

Query: 317 MGKFEQDNHILPSS--VLSQFSNSNQNDISICC---SKFVGFRCILVFMFGLAVLLSAIF 153
           MGK       LP S    S  +N        CC   S +   RC+L+  F  AV LSA+F
Sbjct: 311 MGKNTDAEQNLPVSDGAASARNNGGGRSRCYCCDWISSYFSLRCVLILAFSAAVFLSALF 370

Query: 152 LLPPFSSRYKHRSDLDLNSLIQAHEVVASFKLQRPVSMLKANILQIE 12
            LPPF   +  R DLDL+   + H +VASF + +PVS ++ N+LQ+E
Sbjct: 371 WLPPFLG-FADREDLDLDPRFKDHRIVASFDVGKPVSFMEDNLLQLE 416


Top