BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014399
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19566.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   174   9e-42
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   167   6e-40
emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]   167   6e-40
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   164   5e-39

>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/152 (56%), Positives = 113/152 (74%), Gaps = 3/152 (1%)
 Frame = +2

Query: 20  EYASPGGFAQ---TIQCNGNSISTTIYVNGLDPGVSVEDVKKIFSQYGEVVSVRIPGRKG 190
           +Y+S GG+A    ++Q +G+S++TTI+V GLDP VS ED+++ FSQYGE+VSV+IP  KG
Sbjct: 171 QYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKG 230

Query: 191 FGFVEFANRSNAEVALQELNMTVIGNEIVRLSWCRNPPNKQLMVDYGNQLNGAYCRSQIS 370
            GFV+FANR+NAE ALQ+LN TVIG + VRLSW RNP NKQ+  D+GNQ +GAY   Q+ 
Sbjct: 231 CGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVY 290

Query: 371 EGCGLPATTLPDPSTSSTAYGTYPVYGNRRQQ 466
           +G G       DP+  + AYG YPVYGN +QQ
Sbjct: 291 DGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQ 322


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 418

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/152 (56%), Positives = 113/152 (74%), Gaps = 3/152 (1%)
 Frame = +2

Query: 20  EYASPGGFAQ---TIQCNGNSISTTIYVNGLDPGVSVEDVKKIFSQYGEVVSVRIPGRKG 190
           +Y+S GG+A    ++Q +G+S++TTI+V GLDP VS ED+++ FSQYGE+VSV+IP  KG
Sbjct: 265 QYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKG 324

Query: 191 FGFVEFANRSNAEVALQELNMTVIGNEIVRLSWCRNPPNKQLMVDYGNQLNGAYCRSQIS 370
            GFV+FANR+NAE ALQ+LN TVIG + VRLSW RNP NKQ+  D+GNQ +GAY   Q+ 
Sbjct: 325 CGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVY 384

Query: 371 EGCGLPATTLPDPSTSSTAYGTYPVYGNRRQQ 466
           +G G       DP+  + AYG YPVYGN +QQ
Sbjct: 385 DGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQ 416


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score =  167 bits (424), Expect = 6e-40
 Identities = 81/142 (57%), Positives = 106/142 (74%)
 Frame = +2

Query: 41  FAQTIQCNGNSISTTIYVNGLDPGVSVEDVKKIFSQYGEVVSVRIPGRKGFGFVEFANRS 220
           ++  +Q +G+S++TTI+V GLDP VS ED+++ FSQYGE+VSV+IP  KG GFV+FANR+
Sbjct: 266 YSSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRN 325

Query: 221 NAEVALQELNMTVIGNEIVRLSWCRNPPNKQLMVDYGNQLNGAYCRSQISEGCGLPATTL 400
           NAE ALQ+LN TVIG + VRLSW RNP NKQ+  D+GNQ +GAY   Q+ +G G      
Sbjct: 326 NAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPP 385

Query: 401 PDPSTSSTAYGTYPVYGNRRQQ 466
            DP+  + AYG YPVYGN +QQ
Sbjct: 386 HDPTMYAAAYGAYPVYGNHQQQ 407


>emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
          Length = 536

 Score =  167 bits (424), Expect = 6e-40
 Identities = 86/157 (54%), Positives = 113/157 (71%), Gaps = 8/157 (5%)
 Frame = +2

Query: 20  EYASPGGFAQ---TIQCNGNSISTTIYVNGLDPGVSVEDVKKIFSQYGEVVSVRIPGRKG 190
           +Y+S GG+A    ++Q +G+S++TTI+V GLDP VS ED+++ FSQYGE+VSV+IP  KG
Sbjct: 153 QYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKG 212

Query: 191 FGFVEFANRSNAEVALQELNMTVIGNEIVRLSWCRNPPNKQ-----LMVDYGNQLNGAYC 355
            GFV+FANR+NAE ALQ+LN TVIG + VRLSW RNP NKQ     +  D+GNQ +GAY 
Sbjct: 213 CGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQANSLFMRADFGNQWSGAYY 272

Query: 356 RSQISEGCGLPATTLPDPSTSSTAYGTYPVYGNRRQQ 466
             Q+ +G G       DP+  + AYG YPVYGN +QQ
Sbjct: 273 GGQVYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQ 309


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223550967|gb|EEF52453.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  164 bits (416), Expect = 5e-39
 Identities = 86/149 (57%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
 Frame = +2

Query: 23  YASPGGFAQTIQCNGNSISTTIYVNGLDPGVSVEDVKKIFSQYGEVVSVRIPGRKGFGFV 202
           Y S G   Q  Q +G+S +TTI+V GLDP V+ ED+K+ FSQYGE+VSV+IP  KG GFV
Sbjct: 293 YVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFV 352

Query: 203 EFANRSNAEVALQELNMTVIGNEIVRLSWCRNPPNK-QLMVDYGNQLNGAYCRSQISEGC 379
           +FA+RSNAE ALQ+LN TVIG + VRLSW RNP NK QL  D+GNQ  GAY   QI +G 
Sbjct: 353 QFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGAYYGGQIYDGY 412

Query: 380 GLPATTLPDPSTSSTAYGTYPVYGNRRQQ 466
           G       DPS  +  YG YPVYG+ +QQ
Sbjct: 413 GYALPPPHDPSMYAAPYGAYPVYGSHQQQ 441