BLASTX nr result

ID: Coptis21_contig00014391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014391
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336181.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-07
ref|XP_002298899.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-07

>ref|XP_002336181.1| predicted protein [Populus trichocarpa] gi|222831864|gb|EEE70341.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 70/283 (24%), Positives = 108/283 (38%), Gaps = 14/283 (4%)
 Frame = -2

Query: 807 RRWDELPPELLRHIFLKVPLY----KLYVSTSSVCKLWRSSVLDVLFPIPGMLDLKKIDT 640
           R W+E+  ++L  I  K+        L  +T   CK W  ++LD LFP    LDL   D 
Sbjct: 62  RSWNEMDHDILVMIMNKLVKSLGWRTLDDNTMYFCKPWLLALLDALFPPGATLDLHSYDK 121

Query: 639 M--DRYFRNLYLKFFKILI----DTRPKTQWKTLTTPSLVGLKGHAIHYIAERTPSLEYL 478
              D Y      ++F +L       RP+  +  +    L         Y   R P +  +
Sbjct: 122 FPPDSYCNRARGRYFFLLHLALGPFRPQNHYTKVLFGELPA-DFFPWEYFGSRLPLVRSI 180

Query: 477 HV-NNPVQLGFYREALSYWKNLKGFTCDIRRLEISSLASELRRCCKNIRYLCIRGKLGAK 301
                 +   F   AL  W+NL+   C+       ++   L + CK I  L I G++ + 
Sbjct: 181 SFPTTSIDQFFVVGALLPWRNLEEVCCN------DTIVKCLAKLCKRIHSLTIFGRISSP 234

Query: 300 EAIAIVNXXXXXXXXXXXXXXLTIGAL-LIFDGHKKLVTLDLQHSIFIGEKYLPGFCHRE 124
               I                L++ AL  I DG KKL  LD  H   + EK+L       
Sbjct: 235 TTSLIAENFPALKRLMISSCVLSVNALPTILDGQKKLEYLDTSHCFCVDEKHL------- 287

Query: 123 PGQVQLPLCQGIKAKKWNE--IREKVSGRKTYLRCEEKLCPKC 1
                    + ++AK+W E    +     K +L+C  + CP C
Sbjct: 288 -------YKKQVRAKEWKEEIYVKAAKNIKIHLQCARENCPPC 323


>ref|XP_002298899.1| predicted protein [Populus trichocarpa] gi|222846157|gb|EEE83704.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
 Frame = -2

Query: 801 WDELPPELLRHIFLKVPLYKLYVSTSSVCKLWRSSVLDVLFPIPGMLDLKKIDTMDRYFR 622
           W++L   +L  IF  + L++       VC  W S  LD LF    +LDL+ +D +D   +
Sbjct: 14  WEDLNFSILSLIFSCLSLHEQLFLLPRVCHAWLSVTLDTLFK-NSILDLRLLDKLDEEEQ 72

Query: 621 NLYLKFFKILIDTRPKTQWKTLTTPSLVGLKGHAIHYIAERTPSLE--YLHVNNPVQLGF 448
            L       L   R    W ++  P        A  YIAE+TP++    L  +   ++  
Sbjct: 73  QLRFTHLLRLAINR-FNGWVSIYFPRKYIFGYFATIYIAEKTPNVSCVVLPCDTIYRVSP 131

Query: 447 YREALSYWKNLKGFTCDI---RRLEISSLASELRRCCKNIRYLCIRGKLGAKEAIAIV 283
               L YWK LK F   +   + L +  + S+L  CC NI  L   GK+  KEA+AIV
Sbjct: 132 IYIPLLYWKQLKVFHARLSPDKGLHLH-IISQLVFCCNNIGELGFHGKITEKEALAIV 188


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