BLASTX nr result

ID: Coptis21_contig00014388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014388
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus c...   136   2e-30
ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854...   132   3e-29
ref|XP_004158009.1| PREDICTED: uncharacterized protein LOC101225...   128   5e-28
ref|XP_004153812.1| PREDICTED: uncharacterized protein LOC101208...   128   6e-28

>ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|222848534|gb|EEE86081.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  137 bits (344), Expect = 1e-30
 Identities = 78/153 (50%), Positives = 98/153 (64%), Gaps = 12/153 (7%)
 Frame = +1

Query: 43  DNNSKGRKPKDPSPVSNLRRIP-TASKMILRTKSSISG-----AKMQQSAPVNIPDWSKI 204
           D++S  + P      S+   +P TA +MI  TK++ +      A+ Q SAPVNIPDWSKI
Sbjct: 42  DSSSNSKYPSSGPSFSSAWHLPSTAPRMIPATKTTATNHGGKAAQQQSSAPVNIPDWSKI 101

Query: 205 YRKNTHKGTQSSWSDDDIN------DDHGSHNXXXXXXXXXXXWVPPHEWIAKKLARSQI 366
           Y K++ +   +SW DD         DDH + +            VPPHEW+A+KLARSQI
Sbjct: 102 YGKDS-RDIMASWVDDHNGIAYGDGDDHVNDDVDDCDEDGDDGIVPPHEWLARKLARSQI 160

Query: 367 SSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 465
           SSFSVCEG GRTLKGRDLSKVRNA+LT+TGFLE
Sbjct: 161 SSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE 193


>ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus communis]
           gi|223542320|gb|EEF43862.1| hypothetical protein
           RCOM_0904330 [Ricinus communis]
          Length = 223

 Score =  136 bits (343), Expect = 2e-30
 Identities = 88/186 (47%), Positives = 103/186 (55%), Gaps = 43/186 (23%)
 Frame = +1

Query: 37  RKDNNSKGRKPKD----PSPVSNLRRIPTASKMILR-------------TKSSISGAKMQ 165
           R+D++ K RK KD     SP S+  R+ +A +MI R             T +  + A  Q
Sbjct: 38  REDSSPKIRKSKDNYCSSSPSSSAWRLHSAPRMIPRANIVSPTSAGVPATSTHEAKAVQQ 97

Query: 166 QSAPVNIPDWSKIYRKNTHKGTQSSWSDDDINDD-------------HGSHNXXXXXXXX 306
            SAPVNIPDWSKIY KNT  G+ ++  DDD +DD             HG  N        
Sbjct: 98  SSAPVNIPDWSKIYGKNTRMGSWANNDDDDDDDDDDDDGIVYDDGEDHGHVNGNGYYYNY 157

Query: 307 XXX-------------WVPPHEWIAKKLARSQISSFSVCEGAGRTLKGRDLSKVRNAVLT 447
                            VPPHEWIAKKLARSQISSFSVCEG GRTLKGRDLSKVRNA+L 
Sbjct: 158 NNNNVDVNGNDDEEDEMVPPHEWIAKKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILA 217

Query: 448 RTGFLE 465
           +TGFLE
Sbjct: 218 KTGFLE 223


>ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854465 [Vitis vinifera]
          Length = 190

 Score =  132 bits (333), Expect = 3e-29
 Identities = 84/158 (53%), Positives = 100/158 (63%), Gaps = 15/158 (9%)
 Frame = +1

Query: 37  RKDNNSKGRKPKD------PSPVSNLRRIPTASKMILRTKSSISG-AKMQQ--SAPVNIP 189
           R+D++   RK KD       S  S+  R+PTA + I R  ++ S  AK+ Q  SAP+NIP
Sbjct: 36  REDSSPIMRKSKDYSSGSSSSSSSSAWRLPTAPRGIRRGNNTPSHEAKLVQHSSAPMNIP 95

Query: 190 DWSKIYRKNTHKGTQSSWSD--DDINDDHGSHNXXXXXXXXXXXW----VPPHEWIAKKL 351
           DWSKIYRKN+       W D  +D+ND   +H                 VPPHEWIA+KL
Sbjct: 96  DWSKIYRKNSRA---MPWVDGVEDVNDAGNTHQICVVDDDDDDDGDDDIVPPHEWIARKL 152

Query: 352 ARSQISSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 465
           A SQISSFSVCEG GRTLKGRDLSKVRNAVLT+TGFLE
Sbjct: 153 ASSQISSFSVCEGVGRTLKGRDLSKVRNAVLTKTGFLE 190


>ref|XP_004158009.1| PREDICTED: uncharacterized protein LOC101225374 [Cucumis sativus]
          Length = 178

 Score =  128 bits (322), Expect = 5e-28
 Identities = 74/144 (51%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
 Frame = +1

Query: 46  NNSKGRKPKDPSPVSNLRRIPTASKMILRTKSSISG----AKMQQSAPVNIPDWSKIYRK 213
           ++S        S  S+  R+PTA KMI ++ S+ +     A  + SAPV+IPDWSKIY K
Sbjct: 47  SSSSSSSSSSLSSSSSTWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGK 106

Query: 214 NTHKGTQSSWSDDDINDDHGSHNXXXXXXXXXXXWVPPHEWIAKKLARSQISSFSVCEGA 393
               G+ S+   DD+ D     +            VPPHEWIA+KLARS+ISSFSVCEG 
Sbjct: 107 ---MGSSSTGDKDDVRDQEDGEDEDM---------VPPHEWIAQKLARSRISSFSVCEGV 154

Query: 394 GRTLKGRDLSKVRNAVLTRTGFLE 465
           GRTLKGRDLSKVRNA+LT+TGFLE
Sbjct: 155 GRTLKGRDLSKVRNAILTKTGFLE 178


>ref|XP_004153812.1| PREDICTED: uncharacterized protein LOC101208118 [Cucumis sativus]
          Length = 177

 Score =  128 bits (321), Expect = 6e-28
 Identities = 73/133 (54%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
 Frame = +1

Query: 79  SPVSNLRRIPTASKMILRTKSSISG----AKMQQSAPVNIPDWSKIYRKNTHKGTQSSWS 246
           S  S+  R+PTA KMI ++ S+ +     A  + SAPV+IPDWSKIY K    G+ S+  
Sbjct: 57  SSSSSTWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGK---MGSSSTGD 113

Query: 247 DDDINDDHGSHNXXXXXXXXXXXWVPPHEWIAKKLARSQISSFSVCEGAGRTLKGRDLSK 426
            DD+ D     +            VPPHEWIA+KLARS+ISSFSVCEG GRTLKGRDLSK
Sbjct: 114 KDDVRDQEDGEDEDM---------VPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSK 164

Query: 427 VRNAVLTRTGFLE 465
           VRNA+LT+TGFLE
Sbjct: 165 VRNAILTKTGFLE 177


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