BLASTX nr result

ID: Coptis21_contig00014381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014381
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus c...   160   6e-37
ref|XP_002282173.1| PREDICTED: uncharacterized protein LOC100261...   157   5e-36
ref|XP_002279283.1| PREDICTED: putative GATA transcription facto...   141   3e-31
gb|ABK95624.1| unknown [Populus trichocarpa]                          139   8e-31
emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]   138   2e-30

>ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus communis]
           gi|223546563|gb|EEF48061.1| hypothetical protein
           RCOM_1046780 [Ricinus communis]
          Length = 312

 Score =  160 bits (404), Expect = 6e-37
 Identities = 118/266 (44%), Positives = 144/266 (54%), Gaps = 28/266 (10%)
 Frame = -1

Query: 883 QEVQQLYNREQDQEVGMYVLREESSDE-ILSSTHSTGQSDDGSYSFKLSSCKQEHEVIKE 707
           +E+Q L+++E D    +Y     S D  I+ + +  GQ        +LS CK+E +    
Sbjct: 60  KELQPLHHQEVDN---IYASHGRSWDHRIIKNENENGQ--------ELSVCKKEDKSTSI 108

Query: 706 ENQ-NVLSVKWMSSKMRLMKKMINTERTV------------VDKPTQTTSWALDTDXXXX 566
           E+Q +  SVKWMSSKMRLM+KM+ T++TV             DK    +    D      
Sbjct: 109 EDQRDNSSVKWMSSKMRLMRKMMTTDQTVNTTQHTSSMHKLEDKEKSRSLPLQDDYSSKN 168

Query: 565 XXXXXXNIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKXXXXXXXXXXXANDTLL 386
                 N IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK           AN T+ 
Sbjct: 169 LSDNSNNTIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRALAAAQASANGTIF 228

Query: 385 -----------VAXXXXXXXXSKLHFKAKRCKLTA--RRSPKKLCFNDLALRI-SKNTVY 248
                      V         S L FK KRCK TA  R S KKLCF DL+  I SKN+ +
Sbjct: 229 APDTAAMKTNKVQNKEKRTNNSHLPFK-KRCKFTAQSRGSRKKLCFEDLSSTILSKNSAF 287

Query: 247 HRVYPQDEKEAAILLMALSCNNLAHG 170
            +++PQDEKEAAILLMALS   L HG
Sbjct: 288 QQLFPQDEKEAAILLMALS-YGLVHG 312


>ref|XP_002282173.1| PREDICTED: uncharacterized protein LOC100261004 [Vitis vinifera]
           gi|297738668|emb|CBI27913.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  157 bits (396), Expect = 5e-36
 Identities = 119/315 (37%), Positives = 146/315 (46%), Gaps = 54/315 (17%)
 Frame = -1

Query: 952 MTPTYLH-PSPPSFLLEDPNQFQAQEVQQLYNREQDQEVG----------MYVLREESSD 806
           MTP YL+ P PP F    P Q    +  QL    + Q              +   +E   
Sbjct: 1   MTPNYLNSPPPPPF----PLQLNEDQHHQLLFSPKPQPSSSSSSSLTCPIFFSPTKEQGG 56

Query: 805 EILSSTHSTGQSDDGSYSFKLSSCKQEHEVIKEENQNVL------------------SVK 680
                 H      +    F       +H  ++ E+ N L                  SVK
Sbjct: 57  CHYRDLHQAQPQQEAHDKFVFRGGSYDHPTLESESDNGLKLTIWKTEDRNENHSENGSVK 116

Query: 679 WMSSKMRLMKKMINTERTVVDKPTQTT---------SWALDTD--XXXXXXXXXXNIIRT 533
           WMSSKMR+M+KM+ +++T   KP+ T          S   +TD            N IR 
Sbjct: 117 WMSSKMRVMQKMMISDQTGAQKPSNTALNFGDHKQQSLPSETDYNSINSSNINSNNTIRV 176

Query: 532 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKXXXXXXXXXXXANDTLLVAXXXXXXXXS 353
           C+DCNTTKTPLWRSGPRGPKSLCNACGIRQRK           AN T+L          +
Sbjct: 177 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAATANGTILPTNTAPTKTKA 236

Query: 352 K-----------LHFKAKRCKLTARRS--PKKLCFNDLALRISKNTVYHRVYPQDE-KEA 215
           K            H+K KRCKL A  S   KKLCF D  + +SKN+ +HRV+ QDE KEA
Sbjct: 237 KHKDKKSSNGHVSHYK-KRCKLAAAPSCETKKLCFEDFTISLSKNSAFHRVFLQDEIKEA 295

Query: 214 AILLMALSCNNLAHG 170
           AILLMALSC  L HG
Sbjct: 296 AILLMALSC-GLVHG 309


>ref|XP_002279283.1| PREDICTED: putative GATA transcription factor 22 [Vitis vinifera]
           gi|296081660|emb|CBI20665.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  141 bits (355), Expect = 3e-31
 Identities = 103/276 (37%), Positives = 135/276 (48%), Gaps = 17/276 (6%)
 Frame = -1

Query: 961 PTSMTPTYLHPSPPSFLLEDPNQFQAQEVQQLYNREQDQEVGMYVLREESSDEILSSTHS 782
           P S   +  HP P  F      Q Q  +      ++ + +   Y+      +  + S+ S
Sbjct: 34  PPSYQASSSHPCPSFF--NSSTQSQRGDHSPRDPQQHEDKDDKYISHGGCGESQVFSSSS 91

Query: 781 TGQ--SDDGSYSFKLSSCKQEHEVIKEENQNVLSVKWMSSKMRLMKKMINTERT---VVD 617
             Q  +DD   S KLS  K+E    + +  N  + KWMSSKMRLM+KM+N++ T   +  
Sbjct: 92  LLQPMADDNKSSHKLSVFKKE----EGDEGNKSTEKWMSSKMRLMRKMMNSDCTTAKIEQ 147

Query: 616 KPTQTTSWALDTDXXXXXXXXXXNIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 437
           K      W  + +            IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK
Sbjct: 148 KVEDHQQWD-NINEFNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 206

Query: 436 XXXXXXXXXXXANDTLLVA------XXXXXXXXSKLHF-----KAKRCKLTA-RRSPKKL 293
                      A +   V                K+H      + K CK      + KKL
Sbjct: 207 ARRAMAAAAAAAANGTAVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPPCPPPTEKKL 266

Query: 292 CFNDLALRISKNTVYHRVYPQDEKEAAILLMALSCN 185
           CF D    I KN+ + RV+P+DE+EAAILLMALSC+
Sbjct: 267 CFEDFTSSICKNSGFRRVFPRDEEEAAILLMALSCD 302


>gb|ABK95624.1| unknown [Populus trichocarpa]
          Length = 303

 Score =  139 bits (351), Expect = 8e-31
 Identities = 107/303 (35%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
 Frame = -1

Query: 952 MTPTYLHPSPPSFLLED----------------------PNQF-------QAQEVQQLYN 860
           MTP YL+P+  SF   D                      P  F         +E +   +
Sbjct: 1   MTPAYLNPASSSFPFVDLREEQNLQLFLSPHQAATSLSGPTNFFNTSAHDHQRETKPGES 60

Query: 859 REQD-QEVGMYVLREESSDEILSSTHSTGQSDDGSYSFKLSSCKQEHEVIKEENQNVLSV 683
           R+ D QEV MY +    S    S        +  S    LSS K E      E     SV
Sbjct: 61  RQHDNQEVDMYNISHGGSSS--SFQPEVNDHNYNSNFHNLSSSKMEDGA---EESGESSV 115

Query: 682 KWMSSKMRLMKKMINTERTVVDKPTQTTSWALDT----DXXXXXXXXXXNIIRTCSDCNT 515
           KWM SKMRLM+KM N+  +  D                +          + IR CSDCNT
Sbjct: 116 KWMPSKMRLMQKMTNSNCSETDHMPMKFMLKFHNQQYQNNEINSSSNSNSNIRVCSDCNT 175

Query: 514 TKTPLWRSGPRGPKSLCNACGIRQRKXXXXXXXXXXXANDTLLVAXXXXXXXXSKLHFKA 335
           T TPLWRSGPRGPKSLCNACGIRQRK           AN T++          +K++ K 
Sbjct: 176 TSTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIEASSSTRSTKVNNKV 235

Query: 334 KRCKL--------------TARRSPKKLCFNDLALRISKNTVYHRVYPQDEKEAAILLMA 197
           K+ +               ++ +S KKLCF +LAL +SKN    +V P D +EAAILLM 
Sbjct: 236 KKSRTNHVSQNKKLSKPPESSLQSQKKLCFKNLALSLSKNPALQQVLPHDVEEAAILLME 295

Query: 196 LSC 188
           LSC
Sbjct: 296 LSC 298


>emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]
          Length = 211

 Score =  138 bits (348), Expect = 2e-30
 Identities = 92/211 (43%), Positives = 114/211 (54%), Gaps = 15/211 (7%)
 Frame = -1

Query: 772 SDDGSYSFKLSSCKQEHEVIKEENQNVLSVKWMSSKMRLMKKMINTERT---VVDKPTQT 602
           +DD   S KLS  K+E    + +  N  + KWMSSKMRLM+KM+N++ T   +  K    
Sbjct: 2   ADDNKSSHKLSVFKKE----EGDEGNKSTEKWMSSKMRLMRKMMNSDCTTAKIEQKVEDH 57

Query: 601 TSWALDTDXXXXXXXXXXNIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKXXXXX 422
             W  + +            IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK     
Sbjct: 58  QQWD-NINEXNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAM 116

Query: 421 XXXXXXANDTLLVA------XXXXXXXXSKLHF-----KAKRCKLTA-RRSPKKLCFNDL 278
                 A +   V                K+H      + K CK      + KKLCF D 
Sbjct: 117 AAAAAAAANGTAVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPPCPPPTEKKLCFEDF 176

Query: 277 ALRISKNTVYHRVYPQDEKEAAILLMALSCN 185
              I KN+ + RV+P+DE+EAAILLMALSC+
Sbjct: 177 TSSICKNSGFRRVFPRDEEEAAILLMALSCD 207


Top