BLASTX nr result

ID: Coptis21_contig00014343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014343
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266003.1| PREDICTED: GEM-like protein 4-like isoform 1...   244   3e-62
emb|CAN83539.1| hypothetical protein VITISV_021330 [Vitis vinifera]   236   7e-60
ref|XP_002264731.1| PREDICTED: GEM-like protein 4 [Vitis vinifer...   236   9e-60
emb|CBI17660.3| unnamed protein product [Vitis vinifera]              235   1e-59
ref|XP_002273098.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]    235   1e-59

>ref|XP_002266003.1| PREDICTED: GEM-like protein 4-like isoform 1 [Vitis vinifera]
          Length = 228

 Score =  244 bits (622), Expect = 3e-62
 Identities = 116/159 (72%), Positives = 141/159 (88%)
 Frame = +2

Query: 137 TFADEMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQLFSVNEEEKLLKVSQCYF 316
           +FA  +REHV+LGPK+ +TVK KLSLGARI+Q GG  K+F+ +FSVNE E+LLK SQCY 
Sbjct: 70  SFAFRVREHVRLGPKLSETVKGKLSLGARIIQEGGREKIFKHIFSVNEGEELLKASQCYL 129

Query: 317 STTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVIIPLRKIKRATQSENVNK 496
           STTAGPIAGLLFISTEKVAFCSE+S++LTSPSGE+VR+PYKV+IP+RKIKRA QSENVNK
Sbjct: 130 STTAGPIAGLLFISTEKVAFCSERSISLTSPSGEIVRSPYKVLIPVRKIKRANQSENVNK 189

Query: 497 PTQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQHS 613
           P QKY+EIVT D F+FWFMGF+ Y+KAFK L++AIS ++
Sbjct: 190 PAQKYIEIVTTDGFEFWFMGFLRYEKAFKNLEKAISMYN 228


>emb|CAN83539.1| hypothetical protein VITISV_021330 [Vitis vinifera]
          Length = 258

 Score =  236 bits (602), Expect = 7e-60
 Identities = 121/169 (71%), Positives = 139/169 (82%), Gaps = 4/169 (2%)
 Frame = +2

Query: 140 FADEMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQLFSVNEEEKLLKVSQCYFS 319
           F D +REHV+LG K  +TVK KLSLGARI+Q GGV +VF+Q F V E EKLLKVSQCY S
Sbjct: 52  FVDGVREHVRLGLKFSETVKGKLSLGARILQIGGVKRVFKQNFGVREGEKLLKVSQCYLS 111

Query: 320 TTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVIIPLRKIKRATQSENVNKP 499
           TTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV IPLRKIKRA Q ENV KP
Sbjct: 112 TTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVSIPLRKIKRANQGENVKKP 171

Query: 500 TQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ----HS*IAKHLD 634
           +QKY+EIVT+DNFDFWFMGF+NYQKAF YL+QAISQ    H   A H+D
Sbjct: 172 SQKYMEIVTMDNFDFWFMGFLNYQKAFSYLRQAISQTWNWHIYGAGHID 220


>ref|XP_002264731.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]
           gi|296083042|emb|CBI22446.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score =  236 bits (601), Expect = 9e-60
 Identities = 117/156 (75%), Positives = 134/156 (85%)
 Frame = +2

Query: 140 FADEMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQLFSVNEEEKLLKVSQCYFS 319
           F D +REHV+LG K  +TVK KLSLGARI+Q GGV +VF+Q F V E EKLLKVSQCY S
Sbjct: 52  FVDGVREHVRLGLKFSETVKGKLSLGARILQIGGVKRVFKQNFGVREGEKLLKVSQCYLS 111

Query: 320 TTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVIIPLRKIKRATQSENVNKP 499
           TTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV IPLRKIKRA Q ENV KP
Sbjct: 112 TTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVSIPLRKIKRANQGENVKKP 171

Query: 500 TQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ 607
           +QKY+EIVT+DNFDFWFMGF+NYQKAF YL+QAISQ
Sbjct: 172 SQKYMEIVTMDNFDFWFMGFLNYQKAFSYLRQAISQ 207


>emb|CBI17660.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  235 bits (600), Expect = 1e-59
 Identities = 118/156 (75%), Positives = 134/156 (85%)
 Frame = +2

Query: 140 FADEMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQLFSVNEEEKLLKVSQCYFS 319
           F D +REHV+LG K  +TVK KLSLGARI+Q GG+ +VFRQ F V E EKLLKVSQCY S
Sbjct: 52  FVDGVREHVRLGLKFSETVKGKLSLGARILQIGGMKRVFRQNFGVREGEKLLKVSQCYLS 111

Query: 320 TTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVIIPLRKIKRATQSENVNKP 499
           TTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV IPLRKIKRA QSENV KP
Sbjct: 112 TTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVSIPLRKIKRANQSENVKKP 171

Query: 500 TQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ 607
           +QKY+EIVTVDNFDFWFM F+NYQKAF YL+QAISQ
Sbjct: 172 SQKYMEIVTVDNFDFWFMRFLNYQKAFSYLRQAISQ 207


>ref|XP_002273098.1| PREDICTED: GEM-like protein 4 [Vitis vinifera]
          Length = 189

 Score =  235 bits (600), Expect = 1e-59
 Identities = 118/156 (75%), Positives = 134/156 (85%)
 Frame = +2

Query: 140 FADEMREHVKLGPKIYKTVKRKLSLGARIVQGGGVHKVFRQLFSVNEEEKLLKVSQCYFS 319
           F D +REHV+LG K  +TVK KLSLGARI+Q GG+ +VFRQ F V E EKLLKVSQCY S
Sbjct: 27  FVDGVREHVRLGLKFSETVKGKLSLGARILQIGGMKRVFRQNFGVREGEKLLKVSQCYLS 86

Query: 320 TTAGPIAGLLFISTEKVAFCSEKSLTLTSPSGELVRTPYKVIIPLRKIKRATQSENVNKP 499
           TTAGPIAGLLFIST++VAFCSE+S+  +SP+GELVR  YKV IPLRKIKRA QSENV KP
Sbjct: 87  TTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVSIPLRKIKRANQSENVKKP 146

Query: 500 TQKYLEIVTVDNFDFWFMGFVNYQKAFKYLQQAISQ 607
           +QKY+EIVTVDNFDFWFM F+NYQKAF YL+QAISQ
Sbjct: 147 SQKYMEIVTVDNFDFWFMRFLNYQKAFSYLRQAISQ 182


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