BLASTX nr result
ID: Coptis21_contig00014338
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014338 (693 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii] 203 2e-50 gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536... 202 4e-50 gb|AAO85510.1| SKP1 [Nicotiana benthamiana] 202 4e-50 ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|2235292... 202 7e-50 ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512... 199 3e-49 >gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii] Length = 153 Score = 203 bits (517), Expect = 2e-50 Identities = 100/152 (65%), Positives = 120/152 (78%) Frame = +2 Query: 71 KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250 KMI L SSDGE FE+EE+VA+ES TIK++I+D DT IPLPNV + +L+KVIEYCK HV Sbjct: 2 KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61 Query: 251 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 430 D SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK Sbjct: 62 DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTVADMIKGK 121 Query: 431 TPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526 TPEEIR TF+I ND+T N+WAFE Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153 >gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like protein [Gossypium hirsutum] Length = 156 Score = 202 bits (515), Expect = 4e-50 Identities = 100/152 (65%), Positives = 117/152 (76%) Frame = +2 Query: 71 KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250 + ITL SSDGE FE++E VA+ES TIK++I+D D GIPLPNV + +L+KVIEYCK HV Sbjct: 6 RKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHV 65 Query: 251 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 430 + P K +DR DDELK WD +FV+VDQ LFDLILAANYLNIKGLLDLTC TVADM+KGK Sbjct: 66 EAP-KTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGK 124 Query: 431 TPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526 TPEEIR TF+I ND+T N WAFE Sbjct: 125 TPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156 >gb|AAO85510.1| SKP1 [Nicotiana benthamiana] Length = 153 Score = 202 bits (515), Expect = 4e-50 Identities = 100/152 (65%), Positives = 120/152 (78%) Frame = +2 Query: 71 KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250 KMI L SSDGE FE+EE+VA+ES TIK++I+D DT IPLPNV + +L+KVIEYCK HV Sbjct: 2 KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61 Query: 251 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 430 D SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK Sbjct: 62 DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKRLLDLTCQTVADMIKGK 121 Query: 431 TPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526 TPEEIR TF+I ND+T N+WAFE Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153 >ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|223529263|gb|EEF31235.1| skp1, putative [Ricinus communis] Length = 161 Score = 202 bits (513), Expect = 7e-50 Identities = 103/160 (64%), Positives = 121/160 (75%), Gaps = 6/160 (3%) Frame = +2 Query: 65 TKKMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKH 244 + K ITL SSDGE FE++E VA+ES TIK++I+D D+GIPLPNV + +L+KVIEYCK Sbjct: 2 SSKKITLKSSDGEPFEVDEVVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKK 61 Query: 245 HVDNP-SKIEDREV-----DDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCST 406 HV+ P S EDR + DDELK WD EFV+VDQ+ LFDLILAANYLNIKGLLDLTC T Sbjct: 62 HVETPKSSSEDRTINNSNTDDELKAWDAEFVKVDQSTLFDLILAANYLNIKGLLDLTCQT 121 Query: 407 VADMMKGKTPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526 VADM+KGKTPEEIR TF+I ND+T N WAFE Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161 >ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1, putative [Ricinus communis] Length = 157 Score = 199 bits (507), Expect = 3e-49 Identities = 103/154 (66%), Positives = 117/154 (75%), Gaps = 2/154 (1%) Frame = +2 Query: 71 KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250 K ITL SSDGE FE+EE VA+ES TIK++I+D D+GIPLPNV + +LSKVIEYCK HV Sbjct: 5 KKITLKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKKHV 64 Query: 251 DNPSKIEDR--EVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMK 424 + P K EDR DD+LK WD EFV+VDQ LFDLILAANYLNIK LLDLTC TVADM+K Sbjct: 65 ETP-KSEDRPSSADDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 123 Query: 425 GKTPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526 GKTPEEIR TF+I ND+T N WAFE Sbjct: 124 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157