BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014338
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]              203   2e-50
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   202   4e-50
gb|AAO85510.1| SKP1 [Nicotiana benthamiana]                           202   4e-50
ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|2235292...   202   7e-50
ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512...   199   3e-49

>gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
          Length = 153

 Score =  203 bits (517), Expect = 2e-50
 Identities = 100/152 (65%), Positives = 120/152 (78%)
 Frame = +2

Query: 71  KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250
           KMI L SSDGE FE+EE+VA+ES TIK++I+D   DT IPLPNV + +L+KVIEYCK HV
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61

Query: 251 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 430
           D  SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK
Sbjct: 62  DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTVADMIKGK 121

Query: 431 TPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526
           TPEEIR TF+I ND+T          N+WAFE
Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  202 bits (515), Expect = 4e-50
 Identities = 100/152 (65%), Positives = 117/152 (76%)
 Frame = +2

Query: 71  KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250
           + ITL SSDGE FE++E VA+ES TIK++I+D   D GIPLPNV + +L+KVIEYCK HV
Sbjct: 6   RKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHV 65

Query: 251 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 430
           + P K +DR  DDELK WD +FV+VDQ  LFDLILAANYLNIKGLLDLTC TVADM+KGK
Sbjct: 66  EAP-KTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGK 124

Query: 431 TPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526
           TPEEIR TF+I ND+T          N WAFE
Sbjct: 125 TPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>gb|AAO85510.1| SKP1 [Nicotiana benthamiana]
          Length = 153

 Score =  202 bits (515), Expect = 4e-50
 Identities = 100/152 (65%), Positives = 120/152 (78%)
 Frame = +2

Query: 71  KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250
           KMI L SSDGE FE+EE+VA+ES TIK++I+D   DT IPLPNV + +L+KVIEYCK HV
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHV 61

Query: 251 DNPSKIEDREVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMKGK 430
           D  SK ED+ V+D+LK +D +FV+VDQ+ LFDLILAANYLNIK LLDLTC TVADM+KGK
Sbjct: 62  DAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKRLLDLTCQTVADMIKGK 121

Query: 431 TPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526
           TPEEIR TF+I ND+T          N+WAFE
Sbjct: 122 TPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|223529263|gb|EEF31235.1| skp1,
           putative [Ricinus communis]
          Length = 161

 Score =  202 bits (513), Expect = 7e-50
 Identities = 103/160 (64%), Positives = 121/160 (75%), Gaps = 6/160 (3%)
 Frame = +2

Query: 65  TKKMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKH 244
           + K ITL SSDGE FE++E VA+ES TIK++I+D   D+GIPLPNV + +L+KVIEYCK 
Sbjct: 2   SSKKITLKSSDGEPFEVDEVVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKK 61

Query: 245 HVDNP-SKIEDREV-----DDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCST 406
           HV+ P S  EDR +     DDELK WD EFV+VDQ+ LFDLILAANYLNIKGLLDLTC T
Sbjct: 62  HVETPKSSSEDRTINNSNTDDELKAWDAEFVKVDQSTLFDLILAANYLNIKGLLDLTCQT 121

Query: 407 VADMMKGKTPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526
           VADM+KGKTPEEIR TF+I ND+T          N WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


>ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  199 bits (507), Expect = 3e-49
 Identities = 103/154 (66%), Positives = 117/154 (75%), Gaps = 2/154 (1%)
 Frame = +2

Query: 71  KMITLTSSDGEKFEIEETVAMESITIKNIIDDGAIDTGIPLPNVMAPVLSKVIEYCKHHV 250
           K ITL SSDGE FE+EE VA+ES TIK++I+D   D+GIPLPNV + +LSKVIEYCK HV
Sbjct: 5   KKITLKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKKHV 64

Query: 251 DNPSKIEDR--EVDDELKKWDKEFVQVDQNMLFDLILAANYLNIKGLLDLTCSTVADMMK 424
           + P K EDR    DD+LK WD EFV+VDQ  LFDLILAANYLNIK LLDLTC TVADM+K
Sbjct: 65  ETP-KSEDRPSSADDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 123

Query: 425 GKTPEEIRNTFHIVNDYTTXXXXXXXXXNSWAFE 526
           GKTPEEIR TF+I ND+T          N WAFE
Sbjct: 124 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157