BLASTX nr result

ID: Coptis21_contig00014311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014311
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vin...   216   5e-54
ref|XP_002327129.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
ref|NP_192751.1| DNAJ heat shock N-terminal domain-containing pr...   202   6e-50
ref|XP_002510246.1| zinc finger protein, putative [Ricinus commu...   200   2e-49
ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein ...   200   3e-49

>ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vinifera]
           gi|225432794|ref|XP_002283447.1| PREDICTED: DPH4 homolog
           isoform 2 [Vitis vinifera]
           gi|225432796|ref|XP_002283441.1| PREDICTED: DPH4 homolog
           isoform 1 [Vitis vinifera]
          Length = 182

 Score =  216 bits (549), Expect = 5e-54
 Identities = 103/172 (59%), Positives = 135/172 (78%)
 Frame = +2

Query: 149 LLVGKSNIQKTHYDILSVKEDADYDEIRAGYRSAILNSHPDKLQRVTETSGQPQNLQEKF 328
           +L+ K++ ++T+YDILSVKEDA Y+EIR  YRSAILNSHPDKLQ+ TETS       ++F
Sbjct: 1   MLLYKNSFEQTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNTDPESGDRF 60

Query: 329 LNIQKAWEVLGDSKSRELYDHELKASRHDTETADDIGLEEMSLEDAGDVLELFYQCRCGD 508
           L IQKAWE L D +SR +YD  L+ASR DT TA+D+ LE+M++ED G VLELFYQCRCGD
Sbjct: 61  LKIQKAWETLSDPRSRAVYDSGLQASRQDTATAEDLSLEDMTIEDDGKVLELFYQCRCGD 120

Query: 509 YFVIDSAELEEMGYTLDKKGYKNLVKRPEAVLSSVILPCGSCSLKIRLTIDS 664
           YF +DS+EL EMGY + + G K  ++ P+++ +S ILPCGSCSLK+RL I++
Sbjct: 121 YFSVDSSELGEMGYAVFRDGSKISLQTPDSLPASFILPCGSCSLKVRLLINA 172


>ref|XP_002327129.1| predicted protein [Populus trichocarpa] gi|222835444|gb|EEE73879.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  206 bits (524), Expect = 4e-51
 Identities = 94/172 (54%), Positives = 132/172 (76%)
 Frame = +2

Query: 149 LLVGKSNIQKTHYDILSVKEDADYDEIRAGYRSAILNSHPDKLQRVTETSGQPQNLQEKF 328
           +L  K++I++T+YD+LSVKEDA Y EIR  YRSAILN HPDKLQ   + S       ++F
Sbjct: 1   MLNWKNSIRETYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTRQASDPEDESDDRF 60

Query: 329 LNIQKAWEVLGDSKSRELYDHELKASRHDTETADDIGLEEMSLEDAGDVLELFYQCRCGD 508
           + +QKAWE+LG+S SR +YD +L+A R DTE ++DI LEEM +ED G++ E+FYQC+CGD
Sbjct: 61  MKVQKAWEILGNSMSRAVYDSKLRALRQDTEVSEDISLEEMMVEDNGEIFEMFYQCQCGD 120

Query: 509 YFVIDSAELEEMGYTLDKKGYKNLVKRPEAVLSSVILPCGSCSLKIRLTIDS 664
           YF IDS+E E+MGYTL +      +++P+A+ +SV+LPCGSCSL++RL I++
Sbjct: 121 YFSIDSSEFEKMGYTLSRDECHISIQKPDALPASVVLPCGSCSLQVRLLINA 172


>ref|NP_192751.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis
           thaliana] gi|3695404|gb|AAC62804.1| contains similarity
           to DnaJ domains (Pfam: PF00226, E=5.8e-13) [Arabidopsis
           thaliana] gi|4538977|emb|CAB39765.1| putative protein
           [Arabidopsis thaliana] gi|7267709|emb|CAB78136.1|
           putative protein [Arabidopsis thaliana]
           gi|17529216|gb|AAL38835.1| unknown protein [Arabidopsis
           thaliana] gi|20466053|gb|AAM20361.1| unknown protein
           [Arabidopsis thaliana] gi|332657446|gb|AEE82846.1| DNAJ
           heat shock N-terminal domain-containing protein
           [Arabidopsis thaliana]
          Length = 174

 Score =  202 bits (514), Expect = 6e-50
 Identities = 99/172 (57%), Positives = 132/172 (76%)
 Frame = +2

Query: 149 LLVGKSNIQKTHYDILSVKEDADYDEIRAGYRSAILNSHPDKLQRVTETSGQPQNLQEKF 328
           +LVG++ + +T+Y+ILSVKEDA Y+EIR  YRSAIL+SHPDKL   + +S       EKF
Sbjct: 1   MLVGENCVHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSD----DEKF 56

Query: 329 LNIQKAWEVLGDSKSRELYDHELKASRHDTETADDIGLEEMSLEDAGDVLELFYQCRCGD 508
           L IQKAWEVL D++ R +YD++L++SRHD  TAD+I +E+MS+E  GDV++LFYQCRCGD
Sbjct: 57  LKIQKAWEVLSDAELRVVYDNDLRSSRHDGITADEISIEDMSVEITGDVIDLFYQCRCGD 116

Query: 509 YFVIDSAELEEMGYTLDKKGYKNLVKRPEAVLSSVILPCGSCSLKIRLTIDS 664
           YF +DS+EL  MG+ L + G    VKR  A ++SV+LPCGSCSLK R+ +DS
Sbjct: 117 YFCVDSSELGTMGFALLRDGDFVYVKRLGAFVASVVLPCGSCSLKTRVWVDS 168


>ref|XP_002510246.1| zinc finger protein, putative [Ricinus communis]
           gi|223550947|gb|EEF52433.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 182

 Score =  200 bits (509), Expect = 2e-49
 Identities = 94/168 (55%), Positives = 125/168 (74%)
 Frame = +2

Query: 161 KSNIQKTHYDILSVKEDADYDEIRAGYRSAILNSHPDKLQRVTETSGQPQNLQEKFLNIQ 340
           K ++Q+THYDILSVKEDA Y+EIR  YR ++LN HPDKLQ    TS     L ++FL +Q
Sbjct: 5   KISVQETHYDILSVKEDASYEEIRTSYRLSLLNHHPDKLQSAHRTSDPQDELGDRFLKVQ 64

Query: 341 KAWEVLGDSKSRELYDHELKASRHDTETADDIGLEEMSLEDAGDVLELFYQCRCGDYFVI 520
           KAW+VLGD++SR +YD+EL+A R DT  A+D+ LE+M +ED G+ LELFYQCRCGDYF +
Sbjct: 65  KAWKVLGDARSRAIYDNELRALRKDTGVAEDVSLEDMMIEDGGEALELFYQCRCGDYFSV 124

Query: 521 DSAELEEMGYTLDKKGYKNLVKRPEAVLSSVILPCGSCSLKIRLTIDS 664
           DS EL +MGY L +   K   +  +   +SV+LPCGSCSL++RL I++
Sbjct: 125 DSLELGKMGYILLRDENKISFETTDVSPASVLLPCGSCSLQVRLLINA 172


>ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein 4-like [Glycine max]
          Length = 178

 Score =  200 bits (508), Expect = 3e-49
 Identities = 93/174 (53%), Positives = 131/174 (75%), Gaps = 3/174 (1%)
 Frame = +2

Query: 149 LLVGKSNIQKTHYDILSVKEDADYDEIRAGYRSAILNSHPDKLQRVTETSGQPQNLQEKF 328
           +L+ K++ Q+THY++L+VKEDA+Y+EIRA YRSA+L+ HPDKL + +ETS   Q  +E+F
Sbjct: 1   MLLDKNDTQETHYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKTSETSSSNQTAEERF 60

Query: 329 LNIQKAWEVLGDSKSRELYDHELKASRHD---TETADDIGLEEMSLEDAGDVLELFYQCR 499
           L +QKAWE+L +S SR  YD++L++SR D    + A+D+ L++M +ED G+ LELFYQCR
Sbjct: 61  LKVQKAWEILSNSSSRSFYDNDLRSSRQDVLAADVAEDLSLQDMMIEDDGEALELFYQCR 120

Query: 500 CGDYFVIDSAELEEMGYTLDKKGYKNLVKRPEAVLSSVILPCGSCSLKIRLTID 661
           CGDYF +DS EL+ MGY+L ++G    +   +    SVILPCGSCSLK RL I+
Sbjct: 121 CGDYFSVDSLELKNMGYSLLREGSGISIMNVDTSPGSVILPCGSCSLKARLLIN 174


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