BLASTX nr result

ID: Coptis21_contig00014309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014309
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   335   9e-90
ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   333   3e-89
ref|XP_003566872.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   332   8e-89
dbj|BAE71196.1| putative hydroxymethylglutaryl-CoA lyase [Trifol...   330   2e-88
gb|ABR16866.1| unknown [Picea sitchensis]                             328   1e-87

>ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 433

 Score =  335 bits (858), Expect = 9e-90
 Identities = 167/186 (89%), Positives = 175/186 (94%)
 Frame = -3

Query: 813 FASASESFSKSNINCSIEESLIRYREVADAAKMLSVAVRGYVSCVVGCPVEGSVPPSKVA 634
           FASASESFSKSNINCSIEESL+RYR V  AAK LS+ VRGYVSCVVGCPVEG +PPS+VA
Sbjct: 228 FASASESFSKSNINCSIEESLVRYRAVTHAAKELSIPVRGYVSCVVGCPVEGPIPPSRVA 287

Query: 633 YVAKELYDMGCYEISLGDTIGVGTPGTVVPMLEAIMAVVPLEKLAVHFHDTYGQSLSNIL 454
           YVAKELYDMGC+EISLGDTIGVGTPGTVVPML A+MAVVP EKLAVHFHDTYGQSL+NIL
Sbjct: 288 YVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAVVPAEKLAVHFHDTYGQSLANIL 347

Query: 453 ASLQMGISIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKSNVDLGKLMSAGEFI 274
            SLQMGIS VDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVK+NVDLGKLMSAGEFI
Sbjct: 348 VSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFI 407

Query: 273 CKHLGR 256
            KHLGR
Sbjct: 408 GKHLGR 413


>ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 435

 Score =  333 bits (854), Expect = 3e-89
 Identities = 167/186 (89%), Positives = 173/186 (93%)
 Frame = -3

Query: 813 FASASESFSKSNINCSIEESLIRYREVADAAKMLSVAVRGYVSCVVGCPVEGSVPPSKVA 634
           FASASESFSKSNINCSIEESL+RYR V  AAK LS+ VRGYVSCVVGCPVEG +PPSKVA
Sbjct: 230 FASASESFSKSNINCSIEESLVRYRAVTRAAKQLSIPVRGYVSCVVGCPVEGPIPPSKVA 289

Query: 633 YVAKELYDMGCYEISLGDTIGVGTPGTVVPMLEAIMAVVPLEKLAVHFHDTYGQSLSNIL 454
           YVAKELYDMGC+EISLGDTIGVGTPGTVVPML A+MAVVP EKLAVHFHDTYGQSL NIL
Sbjct: 290 YVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAVVPAEKLAVHFHDTYGQSLPNIL 349

Query: 453 ASLQMGISIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKSNVDLGKLMSAGEFI 274
            SLQMGIS VDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVK+NVDLGKLM AGEFI
Sbjct: 350 VSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGEFI 409

Query: 273 CKHLGR 256
            KHLGR
Sbjct: 410 GKHLGR 415


>ref|XP_003566872.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 443

 Score =  332 bits (850), Expect = 8e-89
 Identities = 161/186 (86%), Positives = 176/186 (94%)
 Frame = -3

Query: 813 FASASESFSKSNINCSIEESLIRYREVADAAKMLSVAVRGYVSCVVGCPVEGSVPPSKVA 634
           FASASE+FSKSNINCSI+ESL RY +VA AAK   + VRGYVSCVVGCPVEGSVPPS VA
Sbjct: 238 FASASEAFSKSNINCSIKESLARYNDVACAAKKHEIPVRGYVSCVVGCPVEGSVPPSNVA 297

Query: 633 YVAKELYDMGCYEISLGDTIGVGTPGTVVPMLEAIMAVVPLEKLAVHFHDTYGQSLSNIL 454
           YVAKELYDMGCYE+SLGDTIGVGTPGTVVPMLEA+M+VVP+EKLAVHFHDTYGQSLSNIL
Sbjct: 298 YVAKELYDMGCYEVSLGDTIGVGTPGTVVPMLEAVMSVVPVEKLAVHFHDTYGQSLSNIL 357

Query: 453 ASLQMGISIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKSNVDLGKLMSAGEFI 274
            SLQMG+++VDSSVAGLGGCPYAKGASGNVATEDVVYML+GLG+K+ VDLGK+MSAGEFI
Sbjct: 358 ISLQMGVNVVDSSVAGLGGCPYAKGASGNVATEDVVYMLHGLGIKTGVDLGKVMSAGEFI 417

Query: 273 CKHLGR 256
           CKHLGR
Sbjct: 418 CKHLGR 423


>dbj|BAE71196.1| putative hydroxymethylglutaryl-CoA lyase [Trifolium pratense]
          Length = 433

 Score =  330 bits (847), Expect = 2e-88
 Identities = 167/186 (89%), Positives = 173/186 (93%)
 Frame = -3

Query: 813 FASASESFSKSNINCSIEESLIRYREVADAAKMLSVAVRGYVSCVVGCPVEGSVPPSKVA 634
           FASASESFSKSNINCSIEESL RYR V  AAK LS+ VRGYVSCVVGCPVEGSV PSKVA
Sbjct: 228 FASASESFSKSNINCSIEESLARYRAVTSAAKALSIPVRGYVSCVVGCPVEGSVSPSKVA 287

Query: 633 YVAKELYDMGCYEISLGDTIGVGTPGTVVPMLEAIMAVVPLEKLAVHFHDTYGQSLSNIL 454
           YVAKELYDMGC+EISLGDTIGVGTPGTVVPML A+MAVVP EKLAVHFHDTYGQSLSNIL
Sbjct: 288 YVAKELYDMGCFEISLGDTIGVGTPGTVVPMLLAVMAVVPTEKLAVHFHDTYGQSLSNIL 347

Query: 453 ASLQMGISIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKSNVDLGKLMSAGEFI 274
            SLQMGIS VDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVK+NVD+ KLMSAG+FI
Sbjct: 348 VSLQMGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDIEKLMSAGDFI 407

Query: 273 CKHLGR 256
            KHLGR
Sbjct: 408 GKHLGR 413


>gb|ABR16866.1| unknown [Picea sitchensis]
          Length = 463

 Score =  328 bits (840), Expect = 1e-87
 Identities = 157/186 (84%), Positives = 176/186 (94%)
 Frame = -3

Query: 813 FASASESFSKSNINCSIEESLIRYREVADAAKMLSVAVRGYVSCVVGCPVEGSVPPSKVA 634
           FASASESFSKSNINC+IEESL RY+++ +AAK L V VRGYVSCVVGCPVEG + PS VA
Sbjct: 258 FASASESFSKSNINCTIEESLCRYKDILNAAKRLCVPVRGYVSCVVGCPVEGPISPSSVA 317

Query: 633 YVAKELYDMGCYEISLGDTIGVGTPGTVVPMLEAIMAVVPLEKLAVHFHDTYGQSLSNIL 454
           YVAKELYDMGCYEISLGDTIGVGTPGTVVPML+A+M+VVP+EKLAVHFHDTYGQSL+NIL
Sbjct: 318 YVAKELYDMGCYEISLGDTIGVGTPGTVVPMLDAVMSVVPVEKLAVHFHDTYGQSLANIL 377

Query: 453 ASLQMGISIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKSNVDLGKLMSAGEFI 274
            SLQMGISI+DSS++GLGGCPYAKGA+GNVATEDVVY+LNGLGVK+NVDLGKL+SA +FI
Sbjct: 378 VSLQMGISIIDSSISGLGGCPYAKGATGNVATEDVVYLLNGLGVKTNVDLGKLLSAADFI 437

Query: 273 CKHLGR 256
           CKHLGR
Sbjct: 438 CKHLGR 443


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