BLASTX nr result

ID: Coptis21_contig00014304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014304
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-61
gb|ACF87156.1| unknown [Zea mays] gi|413926408|gb|AFW66340.1| su...   239   2e-61
ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidops...   239   2e-61
ref|XP_003570336.1| PREDICTED: succinate-semialdehyde dehydrogen...   239   2e-61
ref|XP_002529810.1| succinate semialdehyde dehydrogenase, putati...   238   5e-61

>ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  239 bits (611), Expect = 1e-61
 Identities = 114/141 (80%), Positives = 131/141 (92%)
 Frame = +1

Query: 1   QVCDPATGDVIANVACMGRRETSDAISSAYQTFKTWSKLTASERSKCLRKWYDLLMAHKE 180
           +V +PATG+V+A V CMG+ ET++AISSAY  F++WSKLTASERS+ +RKWYDLL+AHKE
Sbjct: 79  KVLNPATGEVVAIVPCMGQSETNNAISSAYDAFRSWSKLTASERSQRIRKWYDLLIAHKE 138

Query: 181 DLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVG 360
           +LG+LITLEQGKPLKEA+GE+SYGASFIEFYAEEAKR+YGDIIP TL DRRLFVLKQPVG
Sbjct: 139 ELGQLITLEQGKPLKEAMGEVSYGASFIEFYAEEAKRVYGDIIPATLGDRRLFVLKQPVG 198

Query: 361 VVGTITPWNFPLAMITRKVGP 423
           VVG ITPWNFPLAMITRKVGP
Sbjct: 199 VVGAITPWNFPLAMITRKVGP 219


>gb|ACF87156.1| unknown [Zea mays] gi|413926408|gb|AFW66340.1| succinate
           semialdehyde dehydrogenase [Zea mays]
          Length = 527

 Score =  239 bits (610), Expect = 2e-61
 Identities = 112/141 (79%), Positives = 132/141 (93%)
 Frame = +1

Query: 1   QVCDPATGDVIANVACMGRRETSDAISSAYQTFKTWSKLTASERSKCLRKWYDLLMAHKE 180
           +V +PATG+V+ANV+CMG RETSDAI+SA+ TF +WSKLTASERSK LRKWYDL+++HKE
Sbjct: 72  EVQNPATGEVLANVSCMGSRETSDAIASAHSTFYSWSKLTASERSKALRKWYDLIISHKE 131

Query: 181 DLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVG 360
           +L  L+TLEQGKP+KEA+GE++YGASFIE++AEEAKRIYGDIIPPTL+DRRL VLKQPVG
Sbjct: 132 ELALLMTLEQGKPMKEALGEVNYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPVG 191

Query: 361 VVGTITPWNFPLAMITRKVGP 423
           VVG ITPWNFPLAMITRKVGP
Sbjct: 192 VVGAITPWNFPLAMITRKVGP 212


>ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana]
           gi|118575126|sp|Q9SAK4.2|SSDH_ARATH RecName:
           Full=Succinate-semialdehyde dehydrogenase,
           mitochondrial; Short=At-SSADH1; AltName: Full=Aldehyde
           dehydrogenase family 5 member F1; AltName:
           Full=NAD(+)-dependent succinic semialdehyde
           dehydrogenase; Flags: Precursor
           gi|6684442|gb|AAF23590.1|AF117335_1 succinic
           semialdehyde dehydrogenase [Arabidopsis thaliana]
           gi|16226915|gb|AAL16297.1|AF428367_1 At1g79440/T8K14_14
           [Arabidopsis thaliana] gi|15810165|gb|AAL07226.1|
           putative succinic semialdehyde dehydrogenase gabD
           [Arabidopsis thaliana] gi|332198122|gb|AEE36243.1|
           succinate-semialdehyde dehydrogenase [Arabidopsis
           thaliana]
          Length = 528

 Score =  239 bits (610), Expect = 2e-61
 Identities = 111/141 (78%), Positives = 132/141 (93%)
 Frame = +1

Query: 1   QVCDPATGDVIANVACMGRRETSDAISSAYQTFKTWSKLTASERSKCLRKWYDLLMAHKE 180
           +V +PATG++IA+VACMG +ET+DAI+S+Y+ F +WS+LTA ERSK LR+WYDLL+AHKE
Sbjct: 71  KVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRRWYDLLIAHKE 130

Query: 181 DLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVG 360
           +LG+LITLEQGKPLKEAIGE++YGASFIE+YAEEAKR+YGDIIPP L+DRRL VLKQPVG
Sbjct: 131 ELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVG 190

Query: 361 VVGTITPWNFPLAMITRKVGP 423
           VVG ITPWNFPLAMITRKVGP
Sbjct: 191 VVGAITPWNFPLAMITRKVGP 211


>ref|XP_003570336.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 529

 Score =  239 bits (609), Expect = 2e-61
 Identities = 111/141 (78%), Positives = 132/141 (93%)
 Frame = +1

Query: 1   QVCDPATGDVIANVACMGRRETSDAISSAYQTFKTWSKLTASERSKCLRKWYDLLMAHKE 180
           +V +PATG+++ANVACMG +ETSDAI+SA+ TF +WSKLTASERSK LRKW+DLL+AHKE
Sbjct: 74  EVQNPATGEILANVACMGNKETSDAIASAHTTFYSWSKLTASERSKTLRKWHDLLIAHKE 133

Query: 181 DLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVG 360
           +L  L+TLEQGKP+KEA+GE++YGASFIE++AEEAKR+YGDIIPPTLADRRL VLKQP+G
Sbjct: 134 ELALLMTLEQGKPMKEALGEVNYGASFIEYFAEEAKRVYGDIIPPTLADRRLLVLKQPIG 193

Query: 361 VVGTITPWNFPLAMITRKVGP 423
           VVG ITPWNFPLAMITRKVGP
Sbjct: 194 VVGAITPWNFPLAMITRKVGP 214


>ref|XP_002529810.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis]
           gi|223530687|gb|EEF32559.1| succinate semialdehyde
           dehydrogenase, putative [Ricinus communis]
          Length = 607

 Score =  238 bits (606), Expect = 5e-61
 Identities = 115/141 (81%), Positives = 129/141 (91%)
 Frame = +1

Query: 1   QVCDPATGDVIANVACMGRRETSDAISSAYQTFKTWSKLTASERSKCLRKWYDLLMAHKE 180
           QV +PATG+VIA+V CMG  ET DAISSA+  F++WSKLTASERSK LR+W+DLL+AHKE
Sbjct: 147 QVHNPATGEVIADVPCMGGNETKDAISSAHDAFQSWSKLTASERSKHLRRWFDLLIAHKE 206

Query: 181 DLGRLITLEQGKPLKEAIGEISYGASFIEFYAEEAKRIYGDIIPPTLADRRLFVLKQPVG 360
           +LG+LITLEQGKPLKEAIGE+SYGASFIEF+AEEAKR+YGDIIP TL DRRL VLKQPVG
Sbjct: 207 ELGQLITLEQGKPLKEAIGEVSYGASFIEFFAEEAKRVYGDIIPATLGDRRLLVLKQPVG 266

Query: 361 VVGTITPWNFPLAMITRKVGP 423
           VVG ITPWNFPLAMITRKVGP
Sbjct: 267 VVGAITPWNFPLAMITRKVGP 287


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