BLASTX nr result

ID: Coptis21_contig00014289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014289
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313260.1| white-brown-complex ABC transporter family [...   229   2e-58
ref|XP_003529479.1| PREDICTED: ABC transporter G family member 2...   223   1e-56
ref|XP_003556918.1| PREDICTED: ABC transporter G family member 2...   223   2e-56
emb|CBI24242.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002276041.1| PREDICTED: ABC transporter G family member 2...   218   3e-55

>ref|XP_002313260.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222849668|gb|EEE87215.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 566

 Score =  229 bits (584), Expect = 2e-58
 Identities = 115/140 (82%), Positives = 128/140 (91%)
 Frame = -1

Query: 428 ELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIHDPPILLLDEPTSGLDSTSAFQVIE 249
           ELGL HVANSFVGD+E RGISGGERKRVSIG+D+IHDPPILLLDEPTSGLDSTSA QVIE
Sbjct: 109 ELGLFHVANSFVGDEENRGISGGERKRVSIGVDMIHDPPILLLDEPTSGLDSTSALQVIE 168

Query: 248 LLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSHGLNVHNGSLESLEDTITDMGLKIP 69
           LLSSMA+AKQRT+VL+IHQPSYRILQYI +FL+LS G  VHNGSLESLE+TIT +G +IP
Sbjct: 169 LLSSMAKAKQRTVVLSIHQPSYRILQYIPNFLILSRGSVVHNGSLESLEETITKLGFQIP 228

Query: 68  AQLNAIEFAMEIIKPLEDSK 9
            QLNA+EFAMEII  LED+K
Sbjct: 229 LQLNALEFAMEIINTLEDAK 248


>ref|XP_003529479.1| PREDICTED: ABC transporter G family member 23-like [Glycine max]
          Length = 655

 Score =  223 bits (569), Expect = 1e-56
 Identities = 111/139 (79%), Positives = 127/139 (91%)
 Frame = -1

Query: 428 ELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIHDPPILLLDEPTSGLDSTSAFQVIE 249
           ELGL HVANSFVGD+E RGISGGERKRVSIG+D+IH+PPILLLDEPTSGLDSTSA QVIE
Sbjct: 192 ELGLFHVANSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIE 251

Query: 248 LLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSHGLNVHNGSLESLEDTITDMGLKIP 69
           LLSS+A+AKQRT+VL+IHQPSYRILQYIS FL+LSHG  VHNGSLE LE+TI+ +G +IP
Sbjct: 252 LLSSIAKAKQRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLEQLEETISKLGFQIP 311

Query: 68  AQLNAIEFAMEIIKPLEDS 12
            QLNA+EF+MEII+ LE S
Sbjct: 312 TQLNALEFSMEIIRGLEGS 330


>ref|XP_003556918.1| PREDICTED: ABC transporter G family member 23-like [Glycine max]
          Length = 656

 Score =  223 bits (567), Expect = 2e-56
 Identities = 110/139 (79%), Positives = 127/139 (91%)
 Frame = -1

Query: 428 ELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIHDPPILLLDEPTSGLDSTSAFQVIE 249
           ELGL HVA+SFVGD+E RGISGGERKRVSIG+D+IH+PPILLLDEPTSGLDSTSA QVIE
Sbjct: 193 ELGLFHVADSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIE 252

Query: 248 LLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSHGLNVHNGSLESLEDTITDMGLKIP 69
           LLSS+ +AKQRT+VL+IHQPSYRILQYIS FL+LSHG  VHNGSLE LE+TI+ +G +IP
Sbjct: 253 LLSSIVKAKQRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLEQLEETISKLGFQIP 312

Query: 68  AQLNAIEFAMEIIKPLEDS 12
            QLNA+EF+MEII+ LEDS
Sbjct: 313 TQLNALEFSMEIIRGLEDS 331


>emb|CBI24242.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  218 bits (556), Expect = 3e-55
 Identities = 113/139 (81%), Positives = 122/139 (87%)
 Frame = -1

Query: 428 ELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIHDPPILLLDEPTSGLDSTSAFQVIE 249
           ELGLVHVA+SFVGD+E RGISGGERKRVSIG+D+IHDPPILLLDEPTSGLDSTSA QVIE
Sbjct: 189 ELGLVHVADSFVGDEENRGISGGERKRVSIGVDMIHDPPILLLDEPTSGLDSTSALQVIE 248

Query: 248 LLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSHGLNVHNGSLESLEDTITDMGLKIP 69
           LLSSMARAK RTIVL+IHQPSYR+LQYIS FL+LS G  VH GSLE LE+ I  MG KIP
Sbjct: 249 LLSSMARAKHRTIVLSIHQPSYRLLQYISKFLILSRGSVVHIGSLELLEEKIDKMGFKIP 308

Query: 68  AQLNAIEFAMEIIKPLEDS 12
            QLN +EFAMEII  LEDS
Sbjct: 309 LQLNPLEFAMEIIYSLEDS 327


>ref|XP_002276041.1| PREDICTED: ABC transporter G family member 23 [Vitis vinifera]
          Length = 650

 Score =  218 bits (556), Expect = 3e-55
 Identities = 113/139 (81%), Positives = 122/139 (87%)
 Frame = -1

Query: 428 ELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIHDPPILLLDEPTSGLDSTSAFQVIE 249
           ELGLVHVA+SFVGD+E RGISGGERKRVSIG+D+IHDPPILLLDEPTSGLDSTSA QVIE
Sbjct: 189 ELGLVHVADSFVGDEENRGISGGERKRVSIGVDMIHDPPILLLDEPTSGLDSTSALQVIE 248

Query: 248 LLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSHGLNVHNGSLESLEDTITDMGLKIP 69
           LLSSMARAK RTIVL+IHQPSYR+LQYIS FL+LS G  VH GSLE LE+ I  MG KIP
Sbjct: 249 LLSSMARAKHRTIVLSIHQPSYRLLQYISKFLILSRGSVVHIGSLELLEEKIDKMGFKIP 308

Query: 68  AQLNAIEFAMEIIKPLEDS 12
            QLN +EFAMEII  LEDS
Sbjct: 309 LQLNPLEFAMEIIYSLEDS 327


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