BLASTX nr result

ID: Coptis21_contig00014276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014276
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268250.1| PREDICTED: uncharacterized protein LOC100264...   122   7e-26
ref|XP_002320521.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25
ref|XP_002530211.1| conserved hypothetical protein [Ricinus comm...   115   8e-24
gb|AAO22809.1| unknown protein [Arabidopsis thaliana]                 115   1e-23
ref|NP_193086.1| uncharacterized protein [Arabidopsis thaliana] ...   115   1e-23

>ref|XP_002268250.1| PREDICTED: uncharacterized protein LOC100264834 [Vitis vinifera]
           gi|296085028|emb|CBI28443.3| unnamed protein product
           [Vitis vinifera]
          Length = 118

 Score =  122 bits (307), Expect = 7e-26
 Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
 Frame = -1

Query: 550 PCTLFYSPT--KRRSKSFKVHAQLXXXXXXXXXXXXXKFITREQEPEQYWRAAGEGKGEN 377
           P +L ++PT  K+R+  F +HA+L             KFITRE+EPEQYW+ AGE +GEN
Sbjct: 24  PSSLTHTPTSPKKRAHHFSIHAKLGGGDGEIKQGGKKKFITREEEPEQYWQTAGEREGEN 83

Query: 376 PMKTPLPYIILFGMSTPFVILALGFANGWIKVPIR 272
           PMKTPLPYII+FGMSTPFVILA+ FANGW+KVP+R
Sbjct: 84  PMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR 118


>ref|XP_002320521.1| predicted protein [Populus trichocarpa] gi|222861294|gb|EEE98836.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  121 bits (304), Expect = 1e-25
 Identities = 58/87 (66%), Positives = 66/87 (75%)
 Frame = -1

Query: 532 SPTKRRSKSFKVHAQLXXXXXXXXXXXXXKFITREQEPEQYWRAAGEGKGENPMKTPLPY 353
           S  K+R   FK+HA L             KFITREQEPEQYW++AGE +GENPMKTPLPY
Sbjct: 32  SSPKKRVHHFKIHANLGEGDGELKPKGKKKFITREQEPEQYWQSAGEREGENPMKTPLPY 91

Query: 352 IILFGMSTPFVILALGFANGWIKVPIR 272
           II+FGMSTPFVILA+ FANGWIKVP+R
Sbjct: 92  IIIFGMSTPFVILAIAFANGWIKVPVR 118


>ref|XP_002530211.1| conserved hypothetical protein [Ricinus communis]
           gi|223530258|gb|EEF32158.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score =  115 bits (289), Expect = 8e-24
 Identities = 56/93 (60%), Positives = 69/93 (74%)
 Frame = -1

Query: 550 PCTLFYSPTKRRSKSFKVHAQLXXXXXXXXXXXXXKFITREQEPEQYWRAAGEGKGENPM 371
           P +  +S  ++R + FK++A +             KFITREQEPEQYW+ AGE +GENPM
Sbjct: 26  PLSCTFSTPRKRVQKFKINA-IGGGDGELKPKGKKKFITREQEPEQYWQTAGEREGENPM 84

Query: 370 KTPLPYIILFGMSTPFVILALGFANGWIKVPIR 272
           KTPLPYII+FGMSTPFVILA+ FANGWIKVP+R
Sbjct: 85  KTPLPYIIIFGMSTPFVILAIAFANGWIKVPVR 117


>gb|AAO22809.1| unknown protein [Arabidopsis thaliana]
          Length = 119

 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/89 (61%), Positives = 65/89 (73%)
 Frame = -1

Query: 538 FYSPTKRRSKSFKVHAQLXXXXXXXXXXXXXKFITREQEPEQYWRAAGEGKGENPMKTPL 359
           F  P+      FK+HA+L             KFIT+E+EPEQYW++ GE +GENPMKTPL
Sbjct: 31  FCPPSPLGFPEFKLHAKLGGGDGEVKPKDKKKFITKEEEPEQYWQSVGEREGENPMKTPL 90

Query: 358 PYIILFGMSTPFVILALGFANGWIKVPIR 272
           PYII+FGMSTPFVILA+ FANGWIKVPIR
Sbjct: 91  PYIIIFGMSTPFVILAIAFANGWIKVPIR 119


>ref|NP_193086.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4678376|emb|CAB41108.1| putative protein [Arabidopsis
           thaliana] gi|7268053|emb|CAB78392.1| putative protein
           [Arabidopsis thaliana] gi|109946535|gb|ABG48446.1|
           At4g13500 [Arabidopsis thaliana]
           gi|332657886|gb|AEE83286.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 125

 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/89 (61%), Positives = 65/89 (73%)
 Frame = -1

Query: 538 FYSPTKRRSKSFKVHAQLXXXXXXXXXXXXXKFITREQEPEQYWRAAGEGKGENPMKTPL 359
           F  P+      FK+HA+L             KFIT+E+EPEQYW++ GE +GENPMKTPL
Sbjct: 37  FCPPSPLGFPEFKLHAKLGGGDGEVKPKDKKKFITKEEEPEQYWQSVGEREGENPMKTPL 96

Query: 358 PYIILFGMSTPFVILALGFANGWIKVPIR 272
           PYII+FGMSTPFVILA+ FANGWIKVPIR
Sbjct: 97  PYIIIFGMSTPFVILAIAFANGWIKVPIR 125


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