BLASTX nr result
ID: Coptis21_contig00014267
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014267 (1849 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) syntha... 593 e-167 ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-li... 590 e-166 ref|XP_002865017.1| nitrogen regulation family protein [Arabidop... 586 e-165 ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Rici... 586 e-165 ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis tha... 583 e-164 >ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucumis sativus] gi|449484028|ref|XP_004156763.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucumis sativus] Length = 426 Score = 593 bits (1530), Expect = e-167 Identities = 293/412 (71%), Positives = 336/412 (81%), Gaps = 15/412 (3%) Frame = +2 Query: 116 LNFLFTLLPKSFMTTTKIP---PPTSEHEDDECICPD------------TNDLSLLEQPL 250 L ++F+L P S M ++ I P + + D+ +C TN S PL Sbjct: 11 LKYIFSL-PNSLMASSLIQTLKPDLAPQDLDDLLCSPSHKQPQHESSSLTNSTSNDSTPL 69 Query: 251 SSKNSPSCTLSKDLRIERAWAHWKKLGHPKFIVAPMVDNSELPFRMLCRKYGAQAAYTPM 430 SP+ LS++ RIERAWAHW KLG PK IVAPMVDNSELPFR+LCRKYGA+AAYTPM Sbjct: 70 LG--SPTGYLSRESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPM 127 Query: 431 LHSRLFLENEKQRNMEFTTCKEDRPLFVQFCANDPDILLEAAKLVEQHCDYVDINLGCPQ 610 LHSR+F ENEK RNMEFTTC+EDRPLFVQFCANDPD+LLEAA+ VE +CDYVD+NLGCPQ Sbjct: 128 LHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQ 187 Query: 611 RIARRGNYGAFLMDNLPVVRSLVQSLADNLHVPVSCKIRIFPDMQDTIKYARMLEDAGCS 790 RIARRGNYGAFLMDNLP+V+++V+ LA NL VPVSCKIRIFP++QDTI YARMLEDAGCS Sbjct: 188 RIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCS 247 Query: 791 LLAVHGRTRDEKDGKKFRADWNAIKDVKAALRIPVLANGNIRHMDDVLSCLEETGVDGVL 970 LLAVHGRTRDEKDGKKFRA+W+AI VK A+RIPVLANGNIRHM+DV CL+ETGV+GVL Sbjct: 248 LLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQETGVEGVL 307 Query: 971 SAEPLLENPALFAGFRTAEWVDREEEGIEGDLLDQADLLVEYLKLCERYPVPWRMIRCHV 1150 SAE LLENPALFAGFRTAEW++ EE LDQADLLV+YLKLCE+YPVPWRMIR HV Sbjct: 308 SAETLLENPALFAGFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHV 367 Query: 1151 HKLLGDWFKIHPEVREDLNKQSKLTFEFLYDIVKRLRELGTRIPLYAKSSHA 1306 HKLLGDWFKIHP +RED N QSKLTFEFLY++V+RLREL ++PLY K SHA Sbjct: 368 HKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHA 419 >ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera] Length = 424 Score = 590 bits (1521), Expect = e-166 Identities = 294/399 (73%), Positives = 328/399 (82%), Gaps = 3/399 (0%) Frame = +2 Query: 137 LPKSFMTTTKIPPPTSEHED---DECICPDTNDLSLLEQPLSSKNSPSCTLSKDLRIERA 307 + S T + P +D D+ IC + + E SS + PS L+ + RIERA Sbjct: 25 MASSISETLTLTLPAGSPQDSNLDDHICSEQQEHQ--ECQSSSADWPSRCLTGESRIERA 82 Query: 308 WAHWKKLGHPKFIVAPMVDNSELPFRMLCRKYGAQAAYTPMLHSRLFLENEKQRNMEFTT 487 WAHWKKLG PK IVAPMVDNSELPFRMLCRKYGAQAAYTPMLHSR+F ENEK R+ EFTT Sbjct: 83 WAHWKKLGQPKLIVAPMVDNSELPFRMLCRKYGAQAAYTPMLHSRIFSENEKYRSQEFTT 142 Query: 488 CKEDRPLFVQFCANDPDILLEAAKLVEQHCDYVDINLGCPQRIARRGNYGAFLMDNLPVV 667 CKEDRPLFVQFCANDPD LLEAA+ VE +CDYVDINLGCPQRIARRGNYGAFLMDNLP+V Sbjct: 143 CKEDRPLFVQFCANDPDTLLEAAQRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLV 202 Query: 668 RSLVQSLADNLHVPVSCKIRIFPDMQDTIKYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 847 +SLV+ LA NLHVPVSCKIR+FP++QDTI YARMLEDAGCSLLAVHGRTRDEKDGKKFRA Sbjct: 203 KSLVEKLALNLHVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 262 Query: 848 DWNAIKDVKAALRIPVLANGNIRHMDDVLSCLEETGVDGVLSAEPLLENPALFAGFRTAE 1027 DWNAIK VK A+ IPVLANG+IRHMDDV CLEETG DGVLSAE LLENPALFAGF+TAE Sbjct: 263 DWNAIKAVKNAVSIPVLANGDIRHMDDVQRCLEETGADGVLSAESLLENPALFAGFQTAE 322 Query: 1028 WVDREEEGIEGDLLDQADLLVEYLKLCERYPVPWRMIRCHVHKLLGDWFKIHPEVREDLN 1207 W EEG + LDQA+LLVEYLKLCE+YPVPWRMIR HVHKLLG+WF+I P+VR+DLN Sbjct: 323 WALGGEEGNKDGELDQANLLVEYLKLCEKYPVPWRMIRSHVHKLLGEWFRIQPQVRDDLN 382 Query: 1208 KQSKLTFEFLYDIVKRLRELGTRIPLYAKSSHAAFSPKG 1324 QSKLTFEFLY++V +LRELG RIPLY K + A + G Sbjct: 383 SQSKLTFEFLYNMVDQLRELGVRIPLYTKDTPAGRTSNG 421 >ref|XP_002865017.1| nitrogen regulation family protein [Arabidopsis lyrata subsp. lyrata] gi|297310852|gb|EFH41276.1| nitrogen regulation family protein [Arabidopsis lyrata subsp. lyrata] Length = 423 Score = 586 bits (1511), Expect = e-165 Identities = 289/416 (69%), Positives = 336/416 (80%), Gaps = 10/416 (2%) Frame = +2 Query: 104 KLPSLNFLFTLLPKSFMTTTKI------PPPTSEHEDDECICPDTNDLSL---LEQPLSS 256 KL N F L KSF++ T+ P P D+ +C + D + ++ +S Sbjct: 2 KLNLSNLRFLLTRKSFISQTRAMTQNPDPKPDPSKVIDDLLCSEQRDGQIEETVDAVAAS 61 Query: 257 KNSPSCTLSKDLRIERAWAHWKKLGHPKFIVAPMVDNSELPFRMLCRKYGAQAAYTPMLH 436 SPS LS D R+ERAWAHWKKLG PK+IVAPMVDNSELPFR+LC+KYGAQAAYTPMLH Sbjct: 62 LGSPSRVLSIDTRVERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLH 121 Query: 437 SRLFLENEKQRNMEFTTCKEDRPLFVQFCANDPDILLEAAKLVEQHCDYVDINLGCPQRI 616 SR+F E EK RN EFTTCKEDRPLFVQFCANDPD LLEAAK VE +CDYVDINLGCPQRI Sbjct: 122 SRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRI 181 Query: 617 ARRGNYGAFLMDNLPVVRSLVQSLADNLHVPVSCKIRIFPDMQDTIKYARMLEDAGCSLL 796 ARRGNYGAFLMDNLP+V+SLV+ LA NL+VPVSCKIRIFP++QDT+KYA+MLEDAGCSLL Sbjct: 182 ARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLQDTLKYAKMLEDAGCSLL 241 Query: 797 AVHGRTRDEKDGKKFRADWNAIKDVKAALRIPVLANGNIRHMDDVLSCLEETGVDGVLSA 976 AVHGRTRDEKDGKK RADW+AIK+VK ALRIPVL NGN+R ++DV +C++ETGV+GVLSA Sbjct: 242 AVHGRTRDEKDGKKLRADWSAIKEVKNALRIPVLGNGNVRCIEDVDNCIKETGVEGVLSA 301 Query: 977 EPLLENPALFAGFRTAEWV-DREEEGIEGDLLDQADLLVEYLKLCERYPVPWRMIRCHVH 1153 E LLENPA FAGFRTAEWV + EEEG LDQ DL+VEYLKLCE++PVPWRMIR HVH Sbjct: 302 ETLLENPAAFAGFRTAEWVSENEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVH 361 Query: 1154 KLLGDWFKIHPEVREDLNKQSKLTFEFLYDIVKRLRELGTRIPLYAKSSHAAFSPK 1321 K+LG+WF+IHP+VRE LN Q+ LTFEFLY +V +LRELG R+PLY K +P+ Sbjct: 362 KMLGEWFRIHPQVREQLNAQNILTFEFLYGLVDQLRELGGRVPLYKKKEIDTLTPQ 417 >ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Ricinus communis] gi|223526922|gb|EEF29128.1| tRNA-dihydrouridine synthase, putative [Ricinus communis] Length = 426 Score = 586 bits (1510), Expect = e-165 Identities = 287/412 (69%), Positives = 329/412 (79%), Gaps = 11/412 (2%) Frame = +2 Query: 131 TLLPKSFMTTTKIPPPTSEHEDDECICPDTND----LSLLEQPLSSK----NSPSCTLSK 286 +L P + T+ +++DDE +C + S L +SS +PSC L+ Sbjct: 15 SLKPLMASSLTRTVAIDQDNDDDEVLCSSAHQEHTSFSTLPDTVSSSCLGSATPSCYLNG 74 Query: 287 DLRIERAWAHWKKLGHPKFIVAPMVDNSELPFRMLCRKYGAQAAYTPMLHSRLFLENEKQ 466 + R++RAWAHW K+G PK +VAPMVDNSELPFRMLCRKYGA AAYTPMLHSR+F ENEK Sbjct: 75 ESRVDRAWAHWNKIGKPKLLVAPMVDNSELPFRMLCRKYGADAAYTPMLHSRIFTENEKY 134 Query: 467 RNMEFTTCKEDRPLFVQFCANDPDILLEAAKLVEQHCDYVDINLGCPQRIARRGNYGAFL 646 R EFTTC EDRPLFVQFCANDPDILLEAA+ VE +CDYVDINLGCPQRIARRGNYGAFL Sbjct: 135 RTQEFTTCNEDRPLFVQFCANDPDILLEAARKVEPYCDYVDINLGCPQRIARRGNYGAFL 194 Query: 647 MDNLPVVRSLVQSLADNLHVPVSCKIRIFPDMQDTIKYARMLEDAGCSLLAVHGRTRDEK 826 MDNLP+V+SLV+ LA NL+VPVSCKIR+FP + DTI YARMLE+AGCSLLAVHGRTRDEK Sbjct: 195 MDNLPLVKSLVEKLALNLNVPVSCKIRLFPKLDDTISYARMLEEAGCSLLAVHGRTRDEK 254 Query: 827 DGKKFRADWNAIKDVKAALRIPVLANGNIRHMDDVLSCLEETGVDGVLSAEPLLENPALF 1006 DGKKFRADW AIK V+ A++IP+LANGN+RHMDDV +CLEETG DGVLSAE LLENPALF Sbjct: 255 DGKKFRADWKAIKAVRNAVKIPLLANGNVRHMDDVRNCLEETGADGVLSAESLLENPALF 314 Query: 1007 AGFRTAEWVDREEEGIEGDLLDQADLLVEYLKLCERYPVPWRMIRCHVHKLLGDWFKIHP 1186 AGFRTAEWV +EE LDQADLLVEYLKLCE YPVPWRMIR HVHK+LGDWF+IHP Sbjct: 315 AGFRTAEWVVGDEESTRDGKLDQADLLVEYLKLCEEYPVPWRMIRAHVHKMLGDWFRIHP 374 Query: 1187 EVREDLNKQSKLTFEFLYDIVKRLRELGTRIPLYAK---SSHAAFSPKGFTN 1333 VRE+LN QS+LTFEFLY++V +LR LG RIPLY K +S + G TN Sbjct: 375 HVREELNAQSRLTFEFLYNVVDQLRALGVRIPLYVKDLDTSATGVAANGLTN 426 >ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana] gi|10177609|dbj|BAB10956.1| unnamed protein product [Arabidopsis thaliana] gi|15146316|gb|AAK83641.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gi|20908082|gb|AAM26724.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gi|332010932|gb|AED98315.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana] Length = 423 Score = 583 bits (1503), Expect = e-164 Identities = 287/416 (68%), Positives = 335/416 (80%), Gaps = 10/416 (2%) Frame = +2 Query: 104 KLPSLNFLFTLLPKSFMTTTKI------PPPTSEHEDDECICPDTNDLSL---LEQPLSS 256 KL N F KS ++ T+ P P D+ +C + D + ++ +S Sbjct: 2 KLNLSNLRFLRTRKSLISQTRAMTQNPDPKPDPSQVLDDILCSEQRDGQIEETVDTAPAS 61 Query: 257 KNSPSCTLSKDLRIERAWAHWKKLGHPKFIVAPMVDNSELPFRMLCRKYGAQAAYTPMLH 436 SPS LS D R+ERAWAHWKKLG PK+IVAPMVDNSELPFR+LC+KYGAQAAYTPMLH Sbjct: 62 LGSPSRVLSIDTRVERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLH 121 Query: 437 SRLFLENEKQRNMEFTTCKEDRPLFVQFCANDPDILLEAAKLVEQHCDYVDINLGCPQRI 616 SR+F E EK RN EFTTCKEDRPLFVQFCANDPD LLEAAK VE +CDYVDINLGCPQRI Sbjct: 122 SRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRI 181 Query: 617 ARRGNYGAFLMDNLPVVRSLVQSLADNLHVPVSCKIRIFPDMQDTIKYARMLEDAGCSLL 796 ARRGNYGAFLMDNLP+V+SLV+ LA NL+VPVSCKIRIFP+++DT+KYA+MLEDAGCSLL Sbjct: 182 ARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLL 241 Query: 797 AVHGRTRDEKDGKKFRADWNAIKDVKAALRIPVLANGNIRHMDDVLSCLEETGVDGVLSA 976 AVHGRTRDEKDGKKFRADW+AIK+VK A+RIPVLANGN+R ++DV +C++ETGV+GVLSA Sbjct: 242 AVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSA 301 Query: 977 EPLLENPALFAGFRTAEWV-DREEEGIEGDLLDQADLLVEYLKLCERYPVPWRMIRCHVH 1153 E LLENPA FAGFRTAEW D EEEG LDQ DL+VEYLKLCE++PVPWRMIR HVH Sbjct: 302 ETLLENPAAFAGFRTAEWAKDNEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVH 361 Query: 1154 KLLGDWFKIHPEVREDLNKQSKLTFEFLYDIVKRLRELGTRIPLYAKSSHAAFSPK 1321 K+LG+WF+IHP+VRE LN Q+ LTFEFLY +V +LRELG R+PLY K +P+ Sbjct: 362 KMLGEWFRIHPQVREQLNAQNILTFEFLYGLVDQLRELGGRVPLYKKKKIDTLTPQ 417