BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014266
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   107   1e-21
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   103   1e-20
emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]   103   1e-20
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   102   2e-20
gb|AFK45606.1| unknown [Lotus japonicus]                              102   2e-20

>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/55 (94%), Positives = 55/55 (100%)
 Frame = +2

Query: 131 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILL 295
           MVNS++VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILL
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 55


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +2

Query: 131 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILL 295
           MV S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILL
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 55


>emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
          Length = 244

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +2

Query: 131 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILL 295
           MV S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILL
Sbjct: 36  MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 90


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = +2

Query: 131 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILL 295
           MV S +VNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYM+EGMRTSVEAILL
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILL 55


>gb|AFK45606.1| unknown [Lotus japonicus]
          Length = 200

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = +2

Query: 131 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILL 295
           MV+S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVE ILL
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILL 55