BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014255
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   173   8e-41
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   172   1e-40
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   170   7e-40
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   163   6e-38
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   162   1e-37

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  173 bits (438), Expect = 8e-41
 Identities = 105/248 (42%), Positives = 143/248 (57%), Gaps = 2/248 (0%)
 Frame = +1

Query: 1   NWLDLPRDVMIIILSKLDTIDILYSVQRVCSSWRKLCKEPQFFSRIVI--PSRWEDCPRL 174
           NWL+LP DV  +IL KL  ++IL   Q VCSSWRK+C++P  +  I +  P  W D    
Sbjct: 16  NWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDY- 74

Query: 175 GADGLAELVKVAVDRSCGEFMGFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTCFTFHT 354
               L EL + AV RSCG+ + F++E        DLL  + +  N L  LRL  C     
Sbjct: 75  ---NLEELCRQAVKRSCGQLIHFNIE---HFGTDDLLLYITQSCNQLSRLRLVYCNRISD 128

Query: 355 RSMWKQIARKIPLLEEFEIHYDSFSVMAIEEVGRSCPNLHYFKLIGELSWYSRGDWNKMA 534
             + + ++ K+PLLE+ E+ + SF V  +E +G++CP L   KL     +Y R + +K A
Sbjct: 129 EGLVEAVS-KLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKL--NRQFYRRVECDKGA 185

Query: 535 FRIAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLLKKSSDRI 714
             IAE+MP LR L +  N LTN GL+AILDGC  LE LDLR C  +NL   L  K S++I
Sbjct: 186 LAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKI 245

Query: 715 IDVRLPKD 738
            D+RLP D
Sbjct: 246 KDLRLPHD 253


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  172 bits (437), Expect = 1e-40
 Identities = 101/247 (40%), Positives = 152/247 (61%)
 Frame = +1

Query: 1   NWLDLPRDVMIIILSKLDTIDILYSVQRVCSSWRKLCKEPQFFSRIVIPSRWEDCPRLGA 180
           NW +LPRDV  +ILSKL+ ++IL S Q VCS WRKLC+EP  +  I + +  + C  LG 
Sbjct: 19  NWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLCD-LGY 77

Query: 181 DGLAELVKVAVDRSCGEFMGFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTCFTFHTRS 360
           D L E+ + AVDRS G+ +   ++        +LL  +++RS+ +++LRL +C+      
Sbjct: 78  D-LEEMARHAVDRSGGQLLSICID---DFATDNLLNYIIDRSSHIRHLRLVSCYGISDDG 133

Query: 361 MWKQIARKIPLLEEFEIHYDSFSVMAIEEVGRSCPNLHYFKLIGELSWYSRGDWNKMAFR 540
           + + I R +PLL E ++ Y SFS   +E +G+ CP L  F+L  +   +   + ++ A  
Sbjct: 134 LSEGIKR-LPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALA 192

Query: 541 IAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLLKKSSDRIID 720
           IA++MP L+ L L  N LTN GL AILDGC HLE LDLR+C  VNL  +L K+ +++I  
Sbjct: 193 IAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKI 252

Query: 721 VRLPKDA 741
           +R P D+
Sbjct: 253 LRYPNDS 259


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  170 bits (430), Expect = 7e-40
 Identities = 103/248 (41%), Positives = 142/248 (57%), Gaps = 1/248 (0%)
 Frame = +1

Query: 1   NWLDLPRDVMIIILSKLDTIDILYSVQRVCSSWRKLCKEPQFFSRIVIPSRWEDCPRLGA 180
           NW +LP  +   IL +L  I+IL + Q+VC  W ++CK+P  + +I I +R  D      
Sbjct: 180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNR-NDRAAFKY 238

Query: 181 DGLAELVKVAVDRSCGEFMGFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTCFTFHTRS 360
           D L  + + AVDRS G  +   +         DL+  + +RS+ LK L L  CF      
Sbjct: 239 D-LESMCRHAVDRSHGGLIEIEIW---YYGTNDLIMYIADRSSNLKSLGLVRCFPITDEG 294

Query: 361 MWKQIARKIPLLEEFEIHYDSFSVMAIEEVGRSCPNLHYFKLIGELS-WYSRGDWNKMAF 537
           + K ++ K+PLLE  E+ Y  FS  ++ ++GRSCPNL   KL       +S   ++  A 
Sbjct: 295 VAKAVS-KVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAK 353

Query: 538 RIAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLLKKSSDRII 717
            IAESMP+LR L LL NGLTN GL AILDGCPHLE LDLR+C  +NL   L K+  +RI 
Sbjct: 354 AIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIK 413

Query: 718 DVRLPKDA 741
           D+R P D+
Sbjct: 414 DLRCPNDS 421



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 47/67 (70%)
 Frame = +1

Query: 541 IAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLLKKSSDRIID 720
           IAE+MP+LR L L  NGLTN  L+AILD C HL  LDLR+C  +NL   L K+ S+RI D
Sbjct: 25  IAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRD 84

Query: 721 VRLPKDA 741
           +R P D+
Sbjct: 85  LRRPDDS 91


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
            lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
            ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  163 bits (413), Expect = 6e-38
 Identities = 104/254 (40%), Positives = 146/254 (57%), Gaps = 4/254 (1%)
 Frame = +1

Query: 1    NWLDLPRDVMIIILSKLDTIDILYSVQRVCSSWRKLCKEPQFFSRIVIPSRWEDCPRLGA 180
            NW +LP ++   IL +L TIDIL + Q+VC SWR++CK+P  + +I + +  +    LGA
Sbjct: 346  NWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDNLGD----LGA 401

Query: 181  DG--LAELVKVAVDRSCGEFMGFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTCFTFHT 354
             G  L  + + AVDRS G  +   +         +LL  + +RS+ L+ LRL  C+    
Sbjct: 402  MGYDLEIMCRHAVDRSQGGLVEIDIW---YFGTDELLNYIADRSSNLRTLRLIMCYPIAD 458

Query: 355  RSMWKQIARKIPLLEEFEIHYDSFSVMAIEEVGRSCPNLHYFKLIGELSWYSRGDW--NK 528
                + +  K+PL+E  E+ + S S  +++ VG+SCPNL   KL  E       D   N+
Sbjct: 459  EGFIEAVV-KLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSEPDPKFNDDEFNNE 517

Query: 529  MAFRIAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLLKKSSD 708
             A  IAESMP+LR L L  N LTN GL AILDGCPHLE LDLRKC  V+L   L K+  +
Sbjct: 518  EALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVE 577

Query: 709  RIIDVRLPKDAIGG 750
            RI D++ P D+  G
Sbjct: 578  RIKDLKRPTDSTAG 591



 Score =  150 bits (380), Expect = 4e-34
 Identities = 97/257 (37%), Positives = 143/257 (55%), Gaps = 9/257 (3%)
 Frame = +1

Query: 1   NWLDLPRDVMIIILSKLDTIDILYSVQRVCSSWRKLCKEPQFFSRIVIPSRWE-DCPRLG 177
           NW +LP ++   IL +L  ++IL + Q+VC SWR++CK+P  + +IVI +    D  +  
Sbjct: 8   NWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNRDIFKYD 67

Query: 178 ADGLAELVKVAVDRSCGEFMGFSLETRKQVVLIDLL-----FNVVERSNTLKYLRLDTCF 342
            D +    + AVDRS G  +   +E      L+D +      ++   S+ L+ LRL  C 
Sbjct: 68  LDSMC---RHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCH 124

Query: 343 TFHTRSMWKQIARKIPLLEEFEIHYDSFSVMAIEEVGRSCPNLHYFKLIGELSW---YSR 513
               + + + +  K+PLLE+ E+ Y SFS   +  VG+SCP+L   KL          + 
Sbjct: 125 QITDKGVAEAVV-KLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRVEFVINM 183

Query: 514 GDWNKMAFRIAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLL 693
            D N +A  IAESMP+LR L LL N LTN GL AILD C HL+ LDLR+C  +NL    +
Sbjct: 184 RDHNAIA--IAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDFM 241

Query: 694 KKSSDRIIDVRLPKDAI 744
           K+  +RI  +R P D+I
Sbjct: 242 KQCVERIKYLRCPNDSI 258


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  162 bits (411), Expect = 1e-37
 Identities = 106/250 (42%), Positives = 139/250 (55%), Gaps = 4/250 (1%)
 Frame = +1

Query: 1   NWLDLPRDVMIIILSKLDTIDILYSVQRVCSSWRKLCKEPQFFSRIVIPSRWE--DCPRL 174
           NW +LPRDV  +IL K+   DIL S Q VCSSW  +CK+P  +  + I    +  D P  
Sbjct: 18  NWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEIHPLCDFWDLPF- 76

Query: 175 GADGLAELVKVAVDRSCGEFMGFSLETRKQVVLIDLLFNVVERSNTLKYLRLDTCFTFHT 354
               L  L + AVDRS G  +  S+E         L+  + +RS+ LK LRL + +T  +
Sbjct: 77  ---DLEALCRNAVDRSRGGLISISIE---YFATDSLIKYIADRSSHLKRLRLLSSYTL-S 129

Query: 355 RSMWKQIARKIPLLEEFEIHYDSFSVMAIEEVGRSCPNLHYFKLIGELSWYSRG--DWNK 528
            + + + A+K PLLEE +I Y S S  A+  VG SCP L   KL      Y R   + N+
Sbjct: 130 DAAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKL--NCQGYKRPHIESNE 187

Query: 529 MAFRIAESMPQLRRLSLLENGLTNGGLQAILDGCPHLEFLDLRKCLRVNLNFSLLKKSSD 708
            A  I + MP LR L +  N LTN G+QAILDGCPHLEFLDLR+C  V+L   L     +
Sbjct: 188 EALAIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGE 247

Query: 709 RIIDVRLPKD 738
           RI D+R P D
Sbjct: 248 RIKDLRRPDD 257