BLASTX nr result

ID: Coptis21_contig00014234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014234
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR26216.1| vacuolar protein sorting 55 containing protein [O...   233   2e-59
ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG3...   232   3e-59
gb|ACF83201.1| unknown [Zea mays]                                     230   1e-58
gb|ABK93704.1| unknown [Populus trichocarpa]                          229   4e-58
ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp....   226   2e-57

>gb|ABR26216.1| vacuolar protein sorting 55 containing protein [Oryza sativa Indica
           Group]
          Length = 126

 Score =  233 bits (595), Expect = 2e-59
 Identities = 109/126 (86%), Positives = 119/126 (94%)
 Frame = -1

Query: 548 MTMSIGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 369
           M M++ VLAGLAFMFS+SILLQILACALYNNWWPM+  LMYV+VPMPCLFFGGGST FLT
Sbjct: 1   MAMTVEVLAGLAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTQFLT 60

Query: 368 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 189
           SRDGGGW +AAKFLTGASA+GSIAIPAILRHA LIE+GAMFIEFTSFFILVCTVMCFHRA
Sbjct: 61  SRDGGGWFNAAKFLTGASAMGSIAIPAILRHAGLIETGAMFIEFTSFFILVCTVMCFHRA 120

Query: 188 TLEDDW 171
           TL++DW
Sbjct: 121 TLDEDW 126


>ref|NP_001148815.1| LOC100282432 [Zea mays] gi|195618340|gb|ACG31000.1| vacuolar
           protein sorting 55 containing protein [Zea mays]
           gi|195622332|gb|ACG32996.1| vacuolar protein sorting 55
           containing protein [Zea mays]
          Length = 126

 Score =  232 bits (592), Expect = 3e-59
 Identities = 107/126 (84%), Positives = 120/126 (95%)
 Frame = -1

Query: 548 MTMSIGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 369
           M M++ VLA LAFMFS+SILLQILACALYNNWWPM+  LMYV+VPMPCLFFGGGSTHFLT
Sbjct: 1   MAMTVEVLAALAFMFSTSILLQILACALYNNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60

Query: 368 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 189
           SR+GGGWI+AAKFLTGASA+GS+AIPAILRHA LIE+GAMFIEFTSFFILVCTV+CFHRA
Sbjct: 61  SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120

Query: 188 TLEDDW 171
           TL++DW
Sbjct: 121 TLDEDW 126


>gb|ACF83201.1| unknown [Zea mays]
          Length = 126

 Score =  230 bits (587), Expect = 1e-58
 Identities = 106/126 (84%), Positives = 120/126 (95%)
 Frame = -1

Query: 548 MTMSIGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 369
           M M++ VLA LAFMFS+SILLQILACALY+NWWPM+  LMYV+VPMPCLFFGGGSTHFLT
Sbjct: 1   MAMTVEVLAALAFMFSTSILLQILACALYSNWWPMLAALMYVLVPMPCLFFGGGSTHFLT 60

Query: 368 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 189
           SR+GGGWI+AAKFLTGASA+GS+AIPAILRHA LIE+GAMFIEFTSFFILVCTV+CFHRA
Sbjct: 61  SREGGGWINAAKFLTGASAMGSLAIPAILRHAGLIETGAMFIEFTSFFILVCTVLCFHRA 120

Query: 188 TLEDDW 171
           TL++DW
Sbjct: 121 TLDEDW 126


>gb|ABK93704.1| unknown [Populus trichocarpa]
          Length = 126

 Score =  229 bits (583), Expect = 4e-58
 Identities = 106/126 (84%), Positives = 119/126 (94%)
 Frame = -1

Query: 548 MTMSIGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 369
           M M++ VLAGLAFMFS+SILLQILACA+YNNWWPM++ LMYV+VPMPCLFFGGGST FLT
Sbjct: 1   MAMTVEVLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLT 60

Query: 368 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 189
           SRDGGGWIDAAKFLTGASAVGSIAIP ILRHA++IE+GAM+IEFTSF I VCTVMCFHRA
Sbjct: 61  SRDGGGWIDAAKFLTGASAVGSIAIPIILRHAHMIETGAMWIEFTSFVIFVCTVMCFHRA 120

Query: 188 TLEDDW 171
           +LED+W
Sbjct: 121 SLEDEW 126


>ref|XP_002884851.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330691|gb|EFH61110.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score =  226 bits (577), Expect = 2e-57
 Identities = 104/126 (82%), Positives = 116/126 (92%)
 Frame = -1

Query: 548 MTMSIGVLAGLAFMFSSSILLQILACALYNNWWPMITTLMYVMVPMPCLFFGGGSTHFLT 369
           M M+I VLAGLAFMFSSSILLQILACA+Y NWWPM++ LMYV+VPMPC+FFGGGST FLT
Sbjct: 1   MAMTIEVLAGLAFMFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLT 60

Query: 368 SRDGGGWIDAAKFLTGASAVGSIAIPAILRHANLIESGAMFIEFTSFFILVCTVMCFHRA 189
           SRDGGGWIDAAKFLTGAS VGS+AIP ILRHA +IE+GAM IEFTSFFI +CTVMCFHRA
Sbjct: 61  SRDGGGWIDAAKFLTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRA 120

Query: 188 TLEDDW 171
           +L+DDW
Sbjct: 121 SLDDDW 126


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