BLASTX nr result

ID: Coptis21_contig00014233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014233
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315246.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002531973.1| Thylakoid lumenal 25.6 kDa protein, chloropl...   117   7e-25
gb|AAM93722.1| putative oxygen evolving complex protein [Oryza s...   117   1e-24
dbj|BAD03159.1| oxygen evolving complex protein-like [Oryza sati...   117   1e-24
ref|NP_001061609.2| Os08g0347500 [Oryza sativa Japonica Group] g...   117   1e-24

>ref|XP_002315246.1| predicted protein [Populus trichocarpa] gi|222864286|gb|EEF01417.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = -2

Query: 206 KEHDIDGKSYYTFEFIAKAPNFTRHGLGAISIGNGKFYTLTTGSNERRWEKMKDKLNTVI 27
           KEH  DGK YYTFEF+A+APNFTRH L AI+IGNGKFYTLTTG+NERRWEKMKDKL  VI
Sbjct: 176 KEHGADGKIYYTFEFVAQAPNFTRHALSAIAIGNGKFYTLTTGANERRWEKMKDKLQMVI 235

Query: 26  DSFKIF 9
           DSF+IF
Sbjct: 236 DSFEIF 241


>ref|XP_002531973.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223528370|gb|EEF30409.1| Thylakoid
           lumenal 25.6 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 242

 Score =  117 bits (294), Expect = 7e-25
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = -2

Query: 203 EHDIDGKSYYTFEFIAKAPNFTRHGLGAISIGNGKFYTLTTGSNERRWEKMKDKLNTVID 24
           EHD+DGK+YYTFEF A+APN+TRH L  ISIGNGKFYTLTTG+NERRW+KMKDKL+ + D
Sbjct: 176 EHDVDGKTYYTFEFTARAPNYTRHALSTISIGNGKFYTLTTGANERRWDKMKDKLHEITD 235

Query: 23  SFKIF 9
           SFKIF
Sbjct: 236 SFKIF 240


>gb|AAM93722.1| putative oxygen evolving complex protein [Oryza sativa Japonica
           Group] gi|22165114|gb|AAM93731.1| putative oxygen
           evolving complex protein [Oryza sativa Japonica Group]
          Length = 178

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/65 (78%), Positives = 62/65 (95%)
 Frame = -2

Query: 206 KEHDIDGKSYYTFEFIAKAPNFTRHGLGAISIGNGKFYTLTTGSNERRWEKMKDKLNTVI 27
           KE+D+DG++YYTFEF A+APNFTRH LGAI+I NGKFYTLTTG+NERRWEK+KD+L+TV+
Sbjct: 110 KENDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVV 169

Query: 26  DSFKI 12
           DSFKI
Sbjct: 170 DSFKI 174


>dbj|BAD03159.1| oxygen evolving complex protein-like [Oryza sativa Japonica Group]
          Length = 257

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/65 (78%), Positives = 62/65 (95%)
 Frame = -2

Query: 206 KEHDIDGKSYYTFEFIAKAPNFTRHGLGAISIGNGKFYTLTTGSNERRWEKMKDKLNTVI 27
           KE+D+DG++YYTFEF A+APNFTRH LGAI+I NGKFYTLTTG+NERRWEK+KD+L+TV+
Sbjct: 176 KENDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVV 235

Query: 26  DSFKI 12
           DSFKI
Sbjct: 236 DSFKI 240


>ref|NP_001061609.2| Os08g0347500 [Oryza sativa Japonica Group]
           gi|255678381|dbj|BAF23523.2| Os08g0347500 [Oryza sativa
           Japonica Group]
          Length = 163

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/65 (78%), Positives = 62/65 (95%)
 Frame = -2

Query: 206 KEHDIDGKSYYTFEFIAKAPNFTRHGLGAISIGNGKFYTLTTGSNERRWEKMKDKLNTVI 27
           KE+D+DG++YYTFEF A+APNFTRH LGAI+I NGKFYTLTTG+NERRWEK+KD+L+TV+
Sbjct: 95  KENDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVV 154

Query: 26  DSFKI 12
           DSFKI
Sbjct: 155 DSFKI 159


Top