BLASTX nr result

ID: Coptis21_contig00014212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014212
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321912.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_003580215.1| PREDICTED: transcription factor LAF1-like [B...   207   3e-51
dbj|BAK01712.1| predicted protein [Hordeum vulgare subsp. vulgare]    207   3e-51
ref|XP_002446849.1| hypothetical protein SORBIDRAFT_06g023610 [S...   206   4e-51
gb|EAY86852.1| hypothetical protein OsI_08236 [Oryza sativa Indi...   203   5e-50

>ref|XP_002321912.1| predicted protein [Populus trichocarpa] gi|222868908|gb|EEF06039.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  218 bits (554), Expect = 2e-54
 Identities = 119/259 (45%), Positives = 154/259 (59%), Gaps = 9/259 (3%)
 Frame = -2

Query: 861 CRSSMATKSCQKPKLTHRKGLWSPEEDERLRDYILQYGHGCWSSLPMKAGLQRNGKSCRL 682
           C+SS   K   KPK  HRKGLWSPEED+RLR+Y+L++GHGCWSS+P+ AGLQRNGKSCRL
Sbjct: 3   CKSSDMPKLKPKPK--HRKGLWSPEEDQRLRNYVLKHGHGCWSSVPINAGLQRNGKSCRL 60

Query: 681 RWINYLRPGLKRGAFSEREREIISALHHSSGNKWSQIAQQLPGRTDNEIKNYWNSYLKKN 502
           RWINYLRPGLKRG FS +E E I ALHH  GNKWSQIAQ LPGRTDNEIKN+W+SYLKKN
Sbjct: 61  RWINYLRPGLKRGTFSAQEEETILALHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKN 120

Query: 501 AMKPEGKQAQXXXXXXXXXXXTPXXXXXXXXXXXXXXVKTSQLHRIESSLESHNSV---- 334
            +K EG ++                               S +   +SS + + SV    
Sbjct: 121 LLKDEGMESLKRTKSDSSNSDIMELSPSPKRLKMQASSFESSMSAEKSSADINRSVPQMF 180

Query: 333 --ANTGSNQSYFPKILFTEWLSSDHVQNPNSIQSGNQMVPKENLNVVNIVSKHSYSNE-- 166
              N     S  PK++F EWLS +     +    G  M  K  L+  N + + ++ ++  
Sbjct: 181 ESPNEPKGSSLLPKVMFAEWLSLE-----SFASLGEPMDSKSTLD-HNTIFQDNFLHDYL 234

Query: 165 -EEHYFDSGYHHGLNNSAA 112
            +E  F   YH+ L++ ++
Sbjct: 235 LDERAFGGEYHNSLSDGSS 253


>ref|XP_003580215.1| PREDICTED: transcription factor LAF1-like [Brachypodium distachyon]
          Length = 285

 Score =  207 bits (527), Expect = 3e-51
 Identities = 103/201 (51%), Positives = 126/201 (62%), Gaps = 7/201 (3%)
 Frame = -2

Query: 849 MATKSCQKPKLTHRKGLWSPEEDERLRDYILQYGHGCWSSLPMKAGLQRNGKSCRLRWIN 670
           M  KSCQKPK  HRKGLWSPEED++LRDYI++YGH CWS++P+KAGLQRNGKSCRLRWIN
Sbjct: 1   MGCKSCQKPKAHHRKGLWSPEEDQKLRDYIIRYGHSCWSTVPVKAGLQRNGKSCRLRWIN 60

Query: 669 YLRPGLKRGAFSEREREIISALHHSSGNKWSQIAQQLPGRTDNEIKNYWNSYLKKNAMKP 490
           YLRPGLK G FS+ E E + +LH + GNKWS+IAQ LPGRTDNE+KNYWNSYLKK   + 
Sbjct: 61  YLRPGLKHGMFSQEEEETVMSLHATLGNKWSRIAQHLPGRTDNEVKNYWNSYLKK---RV 117

Query: 489 EGKQAQXXXXXXXXXXXTPXXXXXXXXXXXXXXVKTSQLHRIESSLESHNSVANTGS--- 319
           EG QA            +P                +S      S+ +S       G+   
Sbjct: 118 EGAQAAPAKSAGSDSPQSPTAALSESGVKRPENSGSSGPPESSSADDSSCLTGPAGAAAA 177

Query: 318 ----NQSYFPKILFTEWLSSD 268
               +    PK++F +WL  D
Sbjct: 178 LIRPHAPVLPKVMFADWLDMD 198


>dbj|BAK01712.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 282

 Score =  207 bits (527), Expect = 3e-51
 Identities = 101/200 (50%), Positives = 122/200 (61%), Gaps = 6/200 (3%)
 Frame = -2

Query: 849 MATKSCQKPKLTHRKGLWSPEEDERLRDYILQYGHGCWSSLPMKAGLQRNGKSCRLRWIN 670
           M  KSCQKPK  HRKGLWSPEED++LRD+I++YGH CWS++P+KAGLQRNGKSCRLRWIN
Sbjct: 1   MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRYGHSCWSTVPVKAGLQRNGKSCRLRWIN 60

Query: 669 YLRPGLKRGAFSEREREIISALHHSSGNKWSQIAQQLPGRTDNEIKNYWNSYLKK----- 505
           YLRPGLK G FS  E E + +LH + GNKWSQIAQ LPGRTDNE+KNYWNSYLKK     
Sbjct: 61  YLRPGLKHGMFSREEEETVMSLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVEGA 120

Query: 504 -NAMKPEGKQAQXXXXXXXXXXXTPXXXXXXXXXXXXXXVKTSQLHRIESSLESHNSVAN 328
            +  K  G  A                              ++      SSL    + A+
Sbjct: 121 RSPAKSTGSGAPRSPTPSKSGCGRSTVNQPSSSGSSGPPESSTSTFDESSSLTVPGAAAS 180

Query: 327 TGSNQSYFPKILFTEWLSSD 268
              +    PK++F +WL  D
Sbjct: 181 IRPHAPVLPKVMFADWLDMD 200


>ref|XP_002446849.1| hypothetical protein SORBIDRAFT_06g023610 [Sorghum bicolor]
           gi|241938032|gb|EES11177.1| hypothetical protein
           SORBIDRAFT_06g023610 [Sorghum bicolor]
          Length = 298

 Score =  206 bits (525), Expect = 4e-51
 Identities = 90/115 (78%), Positives = 101/115 (87%)
 Frame = -2

Query: 849 MATKSCQKPKLTHRKGLWSPEEDERLRDYILQYGHGCWSSLPMKAGLQRNGKSCRLRWIN 670
           M  K+CQKPK+ +RKGLWSPEEDE+LRDYIL+YGHGCWS+LP+KAGLQRNGKSCRLRWIN
Sbjct: 1   MGCKACQKPKVQYRKGLWSPEEDEKLRDYILRYGHGCWSALPLKAGLQRNGKSCRLRWIN 60

Query: 669 YLRPGLKRGAFSEREREIISALHHSSGNKWSQIAQQLPGRTDNEIKNYWNSYLKK 505
           YLRPGLK G FS  E E + +LH   GNKWSQIA+ LPGRTDNE+KNYWNSYLKK
Sbjct: 61  YLRPGLKHGVFSREEEETVMSLHAKLGNKWSQIARHLPGRTDNEVKNYWNSYLKK 115


>gb|EAY86852.1| hypothetical protein OsI_08236 [Oryza sativa Indica Group]
          Length = 319

 Score =  203 bits (516), Expect = 5e-50
 Identities = 100/212 (47%), Positives = 129/212 (60%), Gaps = 16/212 (7%)
 Frame = -2

Query: 849 MATKSCQKPKLTHRKGLWSPEEDERLRDYILQYGHGCWSSLPMKAGLQRNGKSCRLRWIN 670
           M  KSC+KP+  +RKGLWSPEED++LRDYIL++GHGCWS+LP KAGLQRNGKSCRLRWIN
Sbjct: 1   MGCKSCEKPRPNYRKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWIN 60

Query: 669 YLRPGLKRGAFSEREREIISALHHSSGNKWSQIAQQLPGRTDNEIKNYWNSYLKKNAMKP 490
           YLRPGLK G FS  E E + +LH + GNKWS+IA+ LPGRTDNE+KNYWNSYLKK     
Sbjct: 61  YLRPGLKHGVFSPEEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVESG 120

Query: 489 EGKQAQXXXXXXXXXXXTPXXXXXXXXXXXXXXVKTSQLHRIESSLESHNSVANTGSNQ- 313
            GK +Q           +P               K  +    +SS  +H S + +  +  
Sbjct: 121 GGKTSQGPPTTPASAASSP----ADSDDSHSLQQKPHEPANSDSSEPAHESSSASADSSC 176

Query: 312 ---------------SYFPKILFTEWLSSDHV 262
                          +  PK++F +WL  +++
Sbjct: 177 LTVTTDHPPVSRPHAAVTPKVMFADWLDMEYI 208


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