BLASTX nr result

ID: Coptis21_contig00014202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014202
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplast...   193   5e-47
ref|NP_196046.2| thioredoxin-like 3-2 [Arabidopsis thaliana] gi|...   187   4e-45
ref|XP_002311079.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_002316383.1| predicted protein [Populus trichocarpa] gi|2...   182   9e-44
ref|XP_002873141.1| thioredoxin family protein [Arabidopsis lyra...   177   2e-42

>ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplastic-like [Vitis
           vinifera] gi|296085989|emb|CBI31430.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  193 bits (490), Expect = 5e-47
 Identities = 91/118 (77%), Positives = 102/118 (86%)
 Frame = -1

Query: 673 DSPVSVELDLIVSEAQFDDVITEAQQAGNPLVVVWMATWCRKCIYLKPKLEKMAAEYYPG 494
           DSPVSVEL  I S+ QFD ++ EAQQ    + +VWMATWCRKCIYLKPKLEK+AAEYYP 
Sbjct: 74  DSPVSVELKPISSDTQFDRILGEAQQLEESVAIVWMATWCRKCIYLKPKLEKLAAEYYPR 133

Query: 493 IRFYYVDVNTVPHKFVARAGVTKMPTIQVWKDSKKKAEVVGGHKAYLVVNEVREMIKN 320
           +RFY VDVNTVPHK VARA VTKMPTIQ+WKDSKK+AEV+GGHKAY VVNEVREMI+N
Sbjct: 134 LRFYCVDVNTVPHKLVARAAVTKMPTIQLWKDSKKQAEVIGGHKAYFVVNEVREMIEN 191


>ref|NP_196046.2| thioredoxin-like 3-2 [Arabidopsis thaliana]
           gi|52000834|sp|Q8VZT6.1|TRL32_ARATH RecName:
           Full=Thioredoxin-like 3-2, chloroplastic; AltName:
           Full=Thioredoxin WCRKC-2; Flags: Precursor
           gi|17380752|gb|AAL36206.1| putative thioredoxin
           [Arabidopsis thaliana] gi|21436391|gb|AAM51365.1|
           putative thioredoxin [Arabidopsis thaliana]
           gi|332003337|gb|AED90720.1| thioredoxin-like 3-2
           [Arabidopsis thaliana]
          Length = 192

 Score =  187 bits (474), Expect = 4e-45
 Identities = 95/185 (51%), Positives = 125/185 (67%), Gaps = 14/185 (7%)
 Frame = -1

Query: 832 LSDALRTISPSLLFSHPINPQRNNKSQTFPLVKKLSIYKLTTKTKPSAHA---------- 683
           LS +LR+++P +    P+ P     S +F   +    +  T K   +A            
Sbjct: 7   LSSSLRSLNPKI---SPLVPPYRQTSSSFSRPRNFKYHSFTDKICLAAERIRAVDIQKQD 63

Query: 682 ----EGLDSPVSVELDLIVSEAQFDDVITEAQQAGNPLVVVWMATWCRKCIYLKPKLEKM 515
               E  DSPVSVEL  I  E+ FD V+ +AQ+ G  +V+VWMA WCRKCIYLKPKLEK+
Sbjct: 64  GGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKL 123

Query: 514 AAEYYPGIRFYYVDVNTVPHKFVARAGVTKMPTIQVWKDSKKKAEVVGGHKAYLVVNEVR 335
           AAE+YP +RFY+VDVN VP++ V+RAGVTKMPTIQ+W+D +K+AEV+GGHKA+ VVNEVR
Sbjct: 124 AAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVR 183

Query: 334 EMIKN 320
           EMI+N
Sbjct: 184 EMIEN 188


>ref|XP_002311079.1| predicted protein [Populus trichocarpa] gi|222850899|gb|EEE88446.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  185 bits (470), Expect = 1e-44
 Identities = 87/118 (73%), Positives = 99/118 (83%)
 Frame = -1

Query: 673 DSPVSVELDLIVSEAQFDDVITEAQQAGNPLVVVWMATWCRKCIYLKPKLEKMAAEYYPG 494
           DSPVS EL+ I SE+QFD VI EAQQ    +++VW   WCRKCIYLKPKLEK+AA+YY  
Sbjct: 10  DSPVSFELEPIYSESQFDRVIAEAQQLEESVIIVWCVVWCRKCIYLKPKLEKLAADYYRR 69

Query: 493 IRFYYVDVNTVPHKFVARAGVTKMPTIQVWKDSKKKAEVVGGHKAYLVVNEVREMIKN 320
            RFY VDVN VPHK V RAGVTKMPTIQ+WKDSKK+AEV+GGHKAYLV+NEVREMI+N
Sbjct: 70  SRFYRVDVNNVPHKLVTRAGVTKMPTIQLWKDSKKQAEVIGGHKAYLVINEVREMIEN 127


>ref|XP_002316383.1| predicted protein [Populus trichocarpa] gi|222865423|gb|EEF02554.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  182 bits (462), Expect = 9e-44
 Identities = 85/118 (72%), Positives = 100/118 (84%)
 Frame = -1

Query: 673 DSPVSVELDLIVSEAQFDDVITEAQQAGNPLVVVWMATWCRKCIYLKPKLEKMAAEYYPG 494
           DSPVS EL+ I SE+QFD VI EAQQ    +++VW   WCRKCIYLKPKLEK+AA+Y   
Sbjct: 10  DSPVSFELEPIYSESQFDRVIAEAQQLVESVIIVWCVVWCRKCIYLKPKLEKLAADYNRR 69

Query: 493 IRFYYVDVNTVPHKFVARAGVTKMPTIQVWKDSKKKAEVVGGHKAYLVVNEVREMIKN 320
           +RFY V+VN +PHK VARAGVTKMPTIQ+WKDSKK+AEV+GGHKAYLV+NEVREMI+N
Sbjct: 70  LRFYCVNVNNIPHKLVARAGVTKMPTIQLWKDSKKQAEVIGGHKAYLVINEVREMIEN 127


>ref|XP_002873141.1| thioredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318978|gb|EFH49400.1| thioredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 194

 Score =  177 bits (450), Expect = 2e-42
 Identities = 80/118 (67%), Positives = 100/118 (84%)
 Frame = -1

Query: 673 DSPVSVELDLIVSEAQFDDVITEAQQAGNPLVVVWMATWCRKCIYLKPKLEKMAAEYYPG 494
           DSPVSVEL  I  E+ FD V+ EAQ+ G  +V+VWMA WCRKCIYLKPKLEK+AAE+YP 
Sbjct: 73  DSPVSVELGPICGESHFDQVMEEAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPR 132

Query: 493 IRFYYVDVNTVPHKFVARAGVTKMPTIQVWKDSKKKAEVVGGHKAYLVVNEVREMIKN 320
           +RFY+VDVN VP++ V+RAGVT  PT+Q+W+D +K+AEV+GGHKA+ VVNEVREMI+N
Sbjct: 133 LRFYHVDVNAVPYRLVSRAGVTVSPTLQLWRDGQKQAEVIGGHKAHFVVNEVREMIEN 190


Top